RNA–Protein interactions for RNA: ENST00000522788.5

HOXA3-206, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-206ENST00000522788 S100A7L2Q5SY68 101 aa12.36□□□□□ -0.43
HOXA3-206ENST00000522788 Q6ZRX8 168 aa12.36□□□□□ -0.43
HOXA3-206ENST00000522788 SPAG11AQ6PDA7 123 aa12.35□□□□□ -0.43
HOXA3-206ENST00000522788 TTTY13Q9BZ97 58 aa12.35□□□□□ -0.43
HOXA3-206ENST00000522788 TRAV23DV6A0A075B6W5 121 aa12.34□□□□□ -0.43
HOXA3-206ENST00000522788 TIMM17BO60830 172 aa12.34□□□□□ -0.43
HOXA3-206ENST00000522788 GAGE2AQ6NT46 116 aa12.34□□□□□ -0.43
HOXA3-206ENST00000522788 LINC00308Q8TCZ7 52 aa12.34□□□□□ -0.43
HOXA3-206ENST00000522788 Q8NBF4 154 aa12.33□□□□□ -0.44
HOXA3-206ENST00000522788 ZNF815PA8K554 130 aa12.32□□□□□ -0.44
HOXA3-206ENST00000522788 KRTDAPP60985 99 aa12.31□□□□□ -0.44
HOXA3-206ENST00000522788 IGLV7-46A0A075B6I9 117 aa12.3□□□□□ -0.44
HOXA3-206ENST00000522788 ZNF73O43830 326 aaPredicted RBP12.3□□□□□ -0.44
HOXA3-206ENST00000522788 SPANXCQ9NY87 97 aa12.3□□□□□ -0.44
HOXA3-206ENST00000522788 TPRXLQ17RH7 258 aa12.28□□□□□ -0.44
HOXA3-206ENST00000522788 C4orf48Q5BLP8 95 aa12.27□□□□□ -0.45
HOXA3-206ENST00000522788 JOSD1Q15040 202 aaPredicted RBP12.26□□□□□ -0.45
HOXA3-206ENST00000522788 MOBPQ13875 183 aa12.25□□□□□ -0.45
HOXA3-206ENST00000522788 ANKRD39Q53RE8 183 aa12.25□□□□□ -0.45
HOXA3-206ENST00000522788 IGLV9-49A0A0B4J1Y8 123 aa12.24□□□□□ -0.45
HOXA3-206ENST00000522788 SPINK1P00995 79 aa12.23□□□□□ -0.45
HOXA3-206ENST00000522788 SSBP3-AS1Q7Z2R9 100 aa12.23□□□□□ -0.45
HOXA3-206ENST00000522788 ST20-AS1Q8NBB2 130 aa12.23□□□□□ -0.45
HOXA3-206ENST00000522788 OR13C6PQ8NH95 151 aa12.22□□□□□ -0.45
HOXA3-206ENST00000522788 SPANXDQ9BXN6 97 aa12.22□□□□□ -0.45
HOXA3-206ENST00000522788 CBY1Q9Y3M2 126 aa12.22□□□□□ -0.45
HOXA3-206ENST00000522788 C20orf202A1L168 122 aa12.21□□□□□ -0.45
HOXA3-206ENST00000522788 ATOH7Q8N100 152 aa12.21□□□□□ -0.45
HOXA3-206ENST00000522788 FP248Q71RG6 208 aaPredicted RBP12.2□□□□□ -0.46
HOXA3-206ENST00000522788 CDIP1Q9H305 208 aa12.2□□□□□ -0.46
HOXA3-206ENST00000522788 HINT1P49773 126 aaPredicted RBP12.19□□□□□ -0.46
HOXA3-206ENST00000522788 C5orf52A6NGY3 159 aa12.18□□□□□ -0.46
HOXA3-206ENST00000522788 LINC00518Q8N0U6 118 aa12.18□□□□□ -0.46
HOXA3-206ENST00000522788 SCGB1D4Q6XE38 83 aa12.17□□□□□ -0.46
HOXA3-206ENST00000522788 RPS29P62273 56 aaKnown RBP12.16□□□□□ -0.46
HOXA3-206ENST00000522788 PCP2Q8IVA1 136 aa12.16□□□□□ -0.46
HOXA3-206ENST00000522788 FAT4Q6V0I7 4981 aa12.14□□□□□ -0.47
HOXA3-206ENST00000522788 SPRR1BP22528 89 aa12.14□□□□□ -0.47
HOXA3-206ENST00000522788 ELOF1P60002 83 aaKnown RBP12.14□□□□□ -0.47
HOXA3-206ENST00000522788 C6orf99Q4VX62 202 aa12.14□□□□□ -0.47
HOXA3-206ENST00000522788 Q8N377 158 aa12.14□□□□□ -0.47
HOXA3-206ENST00000522788 HIST3H2BBQ8N257 126 aa12.13□□□□□ -0.47
HOXA3-206ENST00000522788 DHRS4-AS1Q9P1J3 65 aa12.13□□□□□ -0.47
HOXA3-206ENST00000522788 IFITM1P13164 125 aa12.12□□□□□ -0.47
HOXA3-206ENST00000522788 KRTAP13-3Q3SY46 172 aa12.12□□□□□ -0.47
HOXA3-206ENST00000522788 C9orf153Q5TBE3 101 aa12.12□□□□□ -0.47
HOXA3-206ENST00000522788 COX7BP24311 80 aa12.11□□□□□ -0.47
HOXA3-206ENST00000522788 AKR1D1P51857 326 aa12.11□□□□□ -0.47
HOXA3-206ENST00000522788 Q6ZVH6 145 aa12.11□□□□□ -0.47
HOXA3-206ENST00000522788 MUSTN1Q8IVN3 82 aa12.11□□□□□ -0.47
HOXA3-206ENST00000522788 HIST1H2BLQ99880 126 aa12.1□□□□□ -0.47
HOXA3-206ENST00000522788 SNRPEP62304 92 aaKnown RBP12.08□□□□□ -0.48
HOXA3-206ENST00000522788 COPS9Q8WXC6 57 aa12.08□□□□□ -0.48
HOXA3-206ENST00000522788 S100A1P23297 94 aa12.07□□□□□ -0.48
HOXA3-206ENST00000522788 TRBV7-6A0A0J9YX20 115 aa12.05□□□□□ -0.48
HOXA3-206ENST00000522788 SLC25A20O43772 301 aa12.05□□□□□ -0.48
HOXA3-206ENST00000522788 A6NDN8 102 aa12.04□□□□□ -0.48
HOXA3-206ENST00000522788 S100A2P29034 98 aa12.04□□□□□ -0.48
HOXA3-206ENST00000522788 A0A0U1RQV1 116 aa12.03□□□□□ -0.48
HOXA3-206ENST00000522788 SLC25A34Q6PIV7 304 aa12.03□□□□□ -0.48
HOXA3-206ENST00000522788 LAMTOR3Q9UHA4 124 aa12.02□□□□□ -0.49
HOXA3-206ENST00000522788 A0A1B0GWB2 263 aa12.01□□□□□ -0.49
HOXA3-206ENST00000522788 TAL2Q16559 108 aa12□□□□□ -0.49
HOXA3-206ENST00000522788 LINC01547P58512 204 aaPredicted RBP11.99□□□□□ -0.49
HOXA3-206ENST00000522788 DEFB105AQ8NG35 78 aa11.99□□□□□ -0.49
HOXA3-206ENST00000522788 TRAV13-2A0A0B4J235 113 aa11.98□□□□□ -0.49
HOXA3-206ENST00000522788 TEX49A0A1B0GTD5 131 aa11.98□□□□□ -0.49
HOXA3-206ENST00000522788 SMIM29Q86T20 159 aa11.98□□□□□ -0.49
HOXA3-206ENST00000522788 SMIM11BQ8TCY0 68 aa11.98□□□□□ -0.49
HOXA3-206ENST00000522788 Q1RN00 199 aa11.97□□□□□ -0.49
HOXA3-206ENST00000522788 IGLV5-48A0A075B6I7 105 aa11.96□□□□□ -0.49
HOXA3-206ENST00000522788 ASB16-AS1Q495Z4 193 aa11.96□□□□□ -0.49
HOXA3-206ENST00000522788 HRCT1Q6UXD1 115 aa11.96□□□□□ -0.49
HOXA3-206ENST00000522788 HSBP1L1C9JCN9 74 aa11.95□□□□□ -0.5
HOXA3-206ENST00000522788 S100A6P06703 90 aa11.95□□□□□ -0.5
HOXA3-206ENST00000522788 LCE2AQ5TA79 106 aaPredicted RBP11.94□□□□□ -0.5
HOXA3-206ENST00000522788 A4D1N5 150 aa11.93□□□□□ -0.5
HOXA3-206ENST00000522788 LIMD2Q9BT23 127 aa11.91□□□□□ -0.5
HOXA3-206ENST00000522788 PRO1933Q9H354 126 aa11.91□□□□□ -0.5
HOXA3-206ENST00000522788 CD164Q04900 197 aa11.9□□□□□ -0.5
HOXA3-206ENST00000522788 XP32Q5T750 250 aa11.89□□□□□ -0.51
HOXA3-206ENST00000522788 KRTAP4-1Q9BYQ7 146 aa11.89□□□□□ -0.51
HOXA3-206ENST00000522788 SCGB1D1O95968 90 aa11.87□□□□□ -0.51
HOXA3-206ENST00000522788 NHP2Q9NX24 153 aaKnown RBP11.87□□□□□ -0.51
HOXA3-206ENST00000522788 SEC61BP60468 96 aaKnown RBP11.86□□□□□ -0.51
HOXA3-206ENST00000522788 A0A0G2JQZ4 141 aa11.85□□□□□ -0.51
HOXA3-206ENST00000522788 LINC00575Q6W349 94 aa11.84□□□□□ -0.51
HOXA3-206ENST00000522788 H7C2G1 150 aa11.83□□□□□ -0.52
HOXA3-206ENST00000522788 COX8AP10176 69 aa11.83□□□□□ -0.52
HOXA3-206ENST00000522788 Q5XG85 94 aa11.83□□□□□ -0.52
HOXA3-206ENST00000522788 VAMP3Q15836 100 aa11.82□□□□□ -0.52
HOXA3-206ENST00000522788 DLEU1O43261 78 aa11.79□□□□□ -0.52
HOXA3-206ENST00000522788 HIST1H4GQ99525 98 aa11.79□□□□□ -0.52
HOXA3-206ENST00000522788 C12orf57Q99622 126 aa11.79□□□□□ -0.52
HOXA3-206ENST00000522788 hADV29S1A0JD25 119 aa11.77□□□□□ -0.53
HOXA3-206ENST00000522788 C1orf195Q5TG92 126 aa11.76□□□□□ -0.53
HOXA3-206ENST00000522788 Q6ZQY7 126 aa11.76□□□□□ -0.53
HOXA3-206ENST00000522788 C9orf92A6NGG3 77 aa11.74□□□□□ -0.53
HOXA3-206ENST00000522788 C14orf144Q96I85 54 aa11.73□□□□□ -0.53
HOXA3-206ENST00000522788 PAM16Q9Y3D7 125 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms