RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 IGKV2-24A0A0C4DH68 120 aa7.99□□□□□ -1.13
PABPC1-219ENST00000522387 H0YGX0 51 aa7.98□□□□□ -1.13
PABPC1-219ENST00000522387 PRR3P79522 188 aaKnown RBP7.98□□□□□ -1.13
PABPC1-219ENST00000522387 C2orf48Q96LS8 159 aa7.98□□□□□ -1.13
PABPC1-219ENST00000522387 CXCL5P42830 114 aa7.98□□□□□ -1.13
PABPC1-219ENST00000522387 LINC00336Q6ZUF6 198 aa7.98□□□□□ -1.13
PABPC1-219ENST00000522387 CHTF8P0CG12 524 aa7.97□□□□□ -1.13
PABPC1-219ENST00000522387 C9orf129Q5T035 196 aaKnown RBP7.97□□□□□ -1.13
PABPC1-219ENST00000522387 XAGE1AQ9HD64 81 aa7.97□□□□□ -1.13
PABPC1-219ENST00000522387 LRP1BQ9NZR2 4599 aa7.97□□□□□ -1.13
PABPC1-219ENST00000522387 CNBPP62633 177 aaKnown RBP7.97□□□□□ -1.13
PABPC1-219ENST00000522387 HAMPP81172 84 aa7.97□□□□□ -1.13
PABPC1-219ENST00000522387 Q6ZRP5 223 aa7.97□□□□□ -1.13
PABPC1-219ENST00000522387 SMIM20Q8N5G0 67 aa7.97□□□□□ -1.13
PABPC1-219ENST00000522387 OR13C6PQ8NH95 151 aa7.97□□□□□ -1.13
PABPC1-219ENST00000522387 C14orf132Q9NPU4 83 aa7.96□□□□□ -1.13
PABPC1-219ENST00000522387 C3orf22Q8N5N4 141 aa7.95□□□□□ -1.14
PABPC1-219ENST00000522387 C9orf163Q8N9P6 203 aa7.95□□□□□ -1.14
PABPC1-219ENST00000522387 DPH3Q96FX2 82 aa7.95□□□□□ -1.14
PABPC1-219ENST00000522387 TMEM126AQ9H061 195 aa7.95□□□□□ -1.14
PABPC1-219ENST00000522387 A0A1B0GVY2 172 aa7.94□□□□□ -1.14
PABPC1-219ENST00000522387 PANO1I0J062 215 aa7.94□□□□□ -1.14
PABPC1-219ENST00000522387 C9orf153Q5TBE3 101 aa7.94□□□□□ -1.14
PABPC1-219ENST00000522387 OBSCN-AS1Q96MR7 158 aa7.94□□□□□ -1.14
PABPC1-219ENST00000522387 A0A096LNI7 61 aa7.94□□□□□ -1.14
PABPC1-219ENST00000522387 DYNC1H1Q14204 4646 aaKnown RBP7.93□□□□□ -1.14
PABPC1-219ENST00000522387 DNAH8Q96JB1 4490 aa7.93□□□□□ -1.14
PABPC1-219ENST00000522387 C16orf90A8MZG2 172 aa7.92□□□□□ -1.14
PABPC1-219ENST00000522387 NDUFC2-KCTD14E9PQ53 114 aa7.92□□□□□ -1.14
PABPC1-219ENST00000522387 NCR3O14931 201 aa7.92□□□□□ -1.14
PABPC1-219ENST00000522387 UQCRQO14949 82 aa7.92□□□□□ -1.14
PABPC1-219ENST00000522387 Q8NDZ9 215 aa7.92□□□□□ -1.14
PABPC1-219ENST00000522387 FAM168BA1KXE4 195 aa7.92□□□□□ -1.14
PABPC1-219ENST00000522387 KRTAP10-1P60331 282 aa7.91□□□□□ -1.14
PABPC1-219ENST00000522387 FAM30AQ9NZY2 134 aa7.91□□□□□ -1.14
PABPC1-219ENST00000522387 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.91□□□□□ -1.14
PABPC1-219ENST00000522387 IGKV3D-7A0A0C4DH55 119 aa7.91□□□□□ -1.14
PABPC1-219ENST00000522387 LINC00846Q9NV44 126 aa7.91□□□□□ -1.14
PABPC1-219ENST00000522387 ORMDL1Q9P0S3 153 aa7.91□□□□□ -1.14
PABPC1-219ENST00000522387 LOC107984640A0A0U1RRK4 108 aa7.9□□□□□ -1.14
PABPC1-219ENST00000522387 HIST1H4AP62805 103 aaKnown RBP7.9□□□□□ -1.14
PABPC1-219ENST00000522387 Q6JHZ5 121 aa7.9□□□□□ -1.15
PABPC1-219ENST00000522387 COX7CP15954 63 aa7.89□□□□□ -1.15
PABPC1-219ENST00000522387 ATOX1O00244 68 aa7.89□□□□□ -1.15
PABPC1-219ENST00000522387 F8WDY8 70 aa7.88□□□□□ -1.15
PABPC1-219ENST00000522387 COX17Q14061 63 aa7.88□□□□□ -1.15
PABPC1-219ENST00000522387 FAM19A5Q7Z5A7 132 aaPredicted RBP7.87□□□□□ -1.15
PABPC1-219ENST00000522387 LINC00167Q96N53 147 aa7.87□□□□□ -1.15
PABPC1-219ENST00000522387 A0A1W2PNN7 141 aa7.86□□□□□ -1.15
PABPC1-219ENST00000522387 CCKP06307 115 aa7.86□□□□□ -1.15
PABPC1-219ENST00000522387 SERTAD4-AS1Q5TG53 156 aa7.86□□□□□ -1.15
PABPC1-219ENST00000522387 A0A1B0GX51 115 aa7.85□□□□□ -1.15
PABPC1-219ENST00000522387 TLX1NBP0CAT3 122 aa7.85□□□□□ -1.15
PABPC1-219ENST00000522387 A0A087WVE0 104 aa7.85□□□□□ -1.15
PABPC1-219ENST00000522387 NDUFC2O95298 119 aa7.84□□□□□ -1.15
PABPC1-219ENST00000522387 APOBP04114 4563 aaKnown RBP7.84□□□□□ -1.15
PABPC1-219ENST00000522387 CRYGAP11844 174 aa7.84□□□□□ -1.15
PABPC1-219ENST00000522387 KRTAP7-1Q8IUC3 87 aa7.84□□□□□ -1.15
PABPC1-219ENST00000522387 JMJD7-PLA2G4BH0Y9G9 81 aa7.83□□□□□ -1.16
PABPC1-219ENST00000522387 SPACA4Q8TDM5 124 aa7.83□□□□□ -1.16
PABPC1-219ENST00000522387 TMEM256-PLSCR3K7ERE1 68 aa7.83□□□□□ -1.16
PABPC1-219ENST00000522387 CIRBP-AS1Q8TBR5 109 aa7.82□□□□□ -1.16
PABPC1-219ENST00000522387 hADV29S1A0JD25 119 aa7.81□□□□□ -1.16
PABPC1-219ENST00000522387 SCXQ7RTU7 201 aa7.81□□□□□ -1.16
PABPC1-219ENST00000522387 KIAA1109Q2LD37 5005 aa7.81□□□□□ -1.16
PABPC1-219ENST00000522387 FAT1Q14517 4588 aa7.81□□□□□ -1.16
PABPC1-219ENST00000522387 SRRM2Q9UQ35 2752 aaKnown RBP7.81□□□□□ -1.16
PABPC1-219ENST00000522387 RPL37AP8A6NKH3 93 aa7.8□□□□□ -1.16
PABPC1-219ENST00000522387 C6orf99Q4VX62 202 aa7.8□□□□□ -1.16
PABPC1-219ENST00000522387 S100A7L2Q5SY68 101 aa7.8□□□□□ -1.16
PABPC1-219ENST00000522387 PHF5AQ7RTV0 110 aaKnown RBP7.8□□□□□ -1.16
PABPC1-219ENST00000522387 SERP2Q8N6R1 65 aa7.8□□□□□ -1.16
PABPC1-219ENST00000522387 VPS13BQ7Z7G8 4022 aa7.8□□□□□ -1.16
PABPC1-219ENST00000522387 LINC00474Q9P2X8 69 aa7.8□□□□□ -1.16
PABPC1-219ENST00000522387 NKAPP1Q8N9T2 125 aa7.79□□□□□ -1.16
PABPC1-219ENST00000522387 SMR3BP02814 79 aaPredicted RBP7.79□□□□□ -1.16
PABPC1-219ENST00000522387 VPREB1P12018 145 aa7.78□□□□□ -1.16
PABPC1-219ENST00000522387 CYSTM1Q9H1C7 97 aa7.78□□□□□ -1.16
PABPC1-219ENST00000522387 ATP5EP2Q5VTU8 51 aa7.77□□□□□ -1.17
PABPC1-219ENST00000522387 LINC00575Q6W349 94 aa7.77□□□□□ -1.17
PABPC1-219ENST00000522387 Q6ZSA8 131 aa7.77□□□□□ -1.17
PABPC1-219ENST00000522387 HSPG2P98160 4391 aa7.77□□□□□ -1.17
PABPC1-219ENST00000522387 PKIGQ9Y2B9 76 aa7.76□□□□□ -1.17
PABPC1-219ENST00000522387 J3KT08 172 aa7.75□□□□□ -1.17
PABPC1-219ENST00000522387 MRPL55Q7Z7F7 128 aaKnown RBP7.75□□□□□ -1.17
PABPC1-219ENST00000522387 KRTAP11-1Q8IUC1 163 aa7.75□□□□□ -1.17
PABPC1-219ENST00000522387 TRBV10-3A0A0K0K1G6 114 aa7.75□□□□□ -1.17
PABPC1-219ENST00000522387 UBE2BP63146 152 aa7.75□□□□□ -1.17
PABPC1-219ENST00000522387 C7orf33Q8WU49 177 aa7.75□□□□□ -1.17
PABPC1-219ENST00000522387 UBL5Q9BZL1 73 aa7.75□□□□□ -1.17
PABPC1-219ENST00000522387 FAM19A1Q7Z5A9 133 aa7.74□□□□□ -1.17
PABPC1-219ENST00000522387 PLAC8Q9NZF1 115 aa7.74□□□□□ -1.17
PABPC1-219ENST00000522387 TRAV23DV6A0A075B6W5 121 aa7.73□□□□□ -1.17
PABPC1-219ENST00000522387 RBM3P98179 157 aaKnown RBP7.73□□□□□ -1.17
PABPC1-219ENST00000522387 GHRHP01286 108 aa7.73□□□□□ -1.17
PABPC1-219ENST00000522387 TMEM258P61165 79 aa7.73□□□□□ -1.17
PABPC1-219ENST00000522387 Q6ZQT0 140 aa7.73□□□□□ -1.17
PABPC1-219ENST00000522387 LAMTOR3Q9UHA4 124 aa7.73□□□□□ -1.17
PABPC1-219ENST00000522387 IGLV6-57P01721 117 aa7.72□□□□□ -1.17
PABPC1-219ENST00000522387 LOC110117498A0A087WWA1 95 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms