RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 HSBP1L1C9JCN9 74 aa1.91□□□□□ -2.1
VPS13B-209ENST00000521559 PFN2P35080 140 aa1.91□□□□□ -2.1
VPS13B-209ENST00000521559 LINC00158P58513 81 aa1.91□□□□□ -2.1
VPS13B-209ENST00000521559 TSPEAR-AS2P59090 65 aa1.91□□□□□ -2.1
VPS13B-209ENST00000521559 RPL18AQ02543 176 aaKnown RBP1.91□□□□□ -2.1
VPS13B-209ENST00000521559 SCXQ7RTU7 201 aa1.91□□□□□ -2.1
VPS13B-209ENST00000521559 SND1-IT1Q9HBX3 110 aa1.91□□□□□ -2.1
VPS13B-209ENST00000521559 ERG28Q9UKR5 140 aa1.91□□□□□ -2.1
VPS13B-209ENST00000521559 ZNF815PA8K554 130 aa1.9□□□□□ -2.11
VPS13B-209ENST00000521559 TIMM17BO60830 172 aa1.9□□□□□ -2.11
VPS13B-209ENST00000521559 SMIM13P0DJ93 91 aa1.9□□□□□ -2.11
VPS13B-209ENST00000521559 HAMPP81172 84 aa1.9□□□□□ -2.11
VPS13B-209ENST00000521559 MEIG1Q5JSS6 88 aa1.9□□□□□ -2.11
VPS13B-209ENST00000521559 PCP2Q8IVA1 136 aa1.9□□□□□ -2.11
VPS13B-209ENST00000521559 MIR7-3HGQ8N6C7 128 aa1.9□□□□□ -2.11
VPS13B-209ENST00000521559 XAGE1AQ9HD64 81 aa1.9□□□□□ -2.11
VPS13B-209ENST00000521559 CSMD3Q7Z407 3707 aa1.9□□□□□ -2.11
VPS13B-209ENST00000521559 LOC107984156A0A0G2JMH3 177 aa1.89□□□□□ -2.11
VPS13B-209ENST00000521559 DLEU1O43261 78 aa1.89□□□□□ -2.11
VPS13B-209ENST00000521559 SMR3BP02814 79 aaPredicted RBP1.89□□□□□ -2.11
VPS13B-209ENST00000521559 COX8AP10176 69 aa1.89□□□□□ -2.11
VPS13B-209ENST00000521559 PYY3Q5JQD4 70 aa1.89□□□□□ -2.11
VPS13B-209ENST00000521559 PHF5AQ7RTV0 110 aaKnown RBP1.89□□□□□ -2.11
VPS13B-209ENST00000521559 ARL17AQ8IVW1 177 aa1.89□□□□□ -2.11
VPS13B-209ENST00000521559 VAMP8Q9BV40 100 aa1.89□□□□□ -2.11
VPS13B-209ENST00000521559 TTTY13Q9BZ97 58 aa1.89□□□□□ -2.11
VPS13B-209ENST00000521559 TP73-AS1Q9UF72 201 aa1.89□□□□□ -2.11
VPS13B-209ENST00000521559 C22orf24Q9Y442 160 aa1.89□□□□□ -2.11
VPS13B-209ENST00000521559 STARD9Q9P2P6 4700 aa1.89□□□□□ -2.11
VPS13B-209ENST00000521559 IGKV2-28A0A075B6P5 120 aa1.88□□□□□ -2.11
VPS13B-209ENST00000521559 LOC105371267A0A1B0GV96 52 aa1.88□□□□□ -2.11
VPS13B-209ENST00000521559 M0QXV9 152 aa1.88□□□□□ -2.11
VPS13B-209ENST00000521559 IGKV2D-28P01615 120 aa1.88□□□□□ -2.11
VPS13B-209ENST00000521559 IFITM1P13164 125 aa1.88□□□□□ -2.11
VPS13B-209ENST00000521559 SPATA45Q537H7 98 aa1.88□□□□□ -2.11
VPS13B-209ENST00000521559 SOSTDC1Q6X4U4 206 aa1.88□□□□□ -2.11
VPS13B-209ENST00000521559 SCGB1D4Q6XE38 83 aa1.88□□□□□ -2.11
VPS13B-209ENST00000521559 FAM19A5Q7Z5A7 132 aaPredicted RBP1.88□□□□□ -2.11
VPS13B-209ENST00000521559 MRPL55Q7Z7F7 128 aaKnown RBP1.88□□□□□ -2.11
VPS13B-209ENST00000521559 BOD1L2Q8IYS8 172 aa1.88□□□□□ -2.11
VPS13B-209ENST00000521559 DAND5Q8N907 189 aa1.88□□□□□ -2.11
VPS13B-209ENST00000521559 SPANXDQ9BXN6 97 aa1.88□□□□□ -2.11
VPS13B-209ENST00000521559 SPANXCQ9NY87 97 aa1.88□□□□□ -2.11
VPS13B-209ENST00000521559 TRBV10-2A0A0K0K1G8 114 aa1.87□□□□□ -2.11
VPS13B-209ENST00000521559 TMEM238C9JI98 176 aa1.87□□□□□ -2.11
VPS13B-209ENST00000521559 M0R378 163 aa1.87□□□□□ -2.11
VPS13B-209ENST00000521559 NDUFC2O95298 119 aa1.87□□□□□ -2.11
VPS13B-209ENST00000521559 TSPAN13O95857 204 aa1.87□□□□□ -2.11
VPS13B-209ENST00000521559 RPL37AP61513 92 aaKnown RBP1.87□□□□□ -2.11
VPS13B-209ENST00000521559 PRR3P79522 188 aaKnown RBP1.87□□□□□ -2.11
VPS13B-209ENST00000521559 S100A12P80511 92 aa1.87□□□□□ -2.11
VPS13B-209ENST00000521559 Q5VSD8 79 aa1.87□□□□□ -2.11
VPS13B-209ENST00000521559 SLC25A34Q6PIV7 304 aa1.87□□□□□ -2.11
VPS13B-209ENST00000521559 Q8NDZ9 215 aa1.87□□□□□ -2.11
VPS13B-209ENST00000521559 LINC00308Q8TCZ7 52 aa1.87□□□□□ -2.11
VPS13B-209ENST00000521559 COPS9Q8WXC6 57 aa1.87□□□□□ -2.11
VPS13B-209ENST00000521559 C14orf144Q96I85 54 aa1.87□□□□□ -2.11
VPS13B-209ENST00000521559 MIEN1Q9BRT3 115 aa1.87□□□□□ -2.11
VPS13B-209ENST00000521559 SPANXB1Q9NS25 103 aaPredicted RBP1.87□□□□□ -2.11
VPS13B-209ENST00000521559 HIGD1BQ9P298 99 aa1.87□□□□□ -2.11
VPS13B-209ENST00000521559 ALMS1Q8TCU4 4167 aa1.87□□□□□ -2.11
VPS13B-209ENST00000521559 DYNC2H1Q8NCM8 4307 aaKnown RBP1.86□□□□□ -2.11
VPS13B-209ENST00000521559 IGLV1-50A0A075B6I6 118 aa1.86□□□□□ -2.11
VPS13B-209ENST00000521559 NCR3O14931 201 aa1.86□□□□□ -2.11
VPS13B-209ENST00000521559 BCE1O60756 84 aa1.86□□□□□ -2.11
VPS13B-209ENST00000521559 IGLV7-43P04211 117 aa1.86□□□□□ -2.11
VPS13B-209ENST00000521559 SMIM6P0DI80 62 aa1.86□□□□□ -2.11
VPS13B-209ENST00000521559 UBE2AP49459 152 aa1.86□□□□□ -2.11
VPS13B-209ENST00000521559 KRTAP10-4P60372 401 aaPredicted RBP1.86□□□□□ -2.11
VPS13B-209ENST00000521559 NPC2P61916 151 aa1.86□□□□□ -2.11
VPS13B-209ENST00000521559 UBE2BP63146 152 aa1.86□□□□□ -2.11
VPS13B-209ENST00000521559 TAL2Q16559 108 aa1.86□□□□□ -2.11
VPS13B-209ENST00000521559 C1orf137Q5JT78 98 aa1.86□□□□□ -2.11
VPS13B-209ENST00000521559 MUSTN1Q8IVN3 82 aa1.86□□□□□ -2.11
VPS13B-209ENST00000521559 KCNQ1DNQ9H478 68 aa1.86□□□□□ -2.11
VPS13B-209ENST00000521559 UQCR10Q9UDW1 63 aa1.86□□□□□ -2.11
VPS13B-209ENST00000521559 PSORS1C2Q9UIG4 136 aa1.86□□□□□ -2.11
VPS13B-209ENST00000521559 DNAH7Q8WXX0 4024 aa1.86□□□□□ -2.11
VPS13B-209ENST00000521559 TRBV10-3A0A0K0K1G6 114 aa1.85□□□□□ -2.11
VPS13B-209ENST00000521559 IGLV6-57P01721 117 aa1.85□□□□□ -2.11
VPS13B-209ENST00000521559 INAFM2P0DMQ5 153 aa1.85□□□□□ -2.11
VPS13B-209ENST00000521559 DDTP30046 118 aa1.85□□□□□ -2.11
VPS13B-209ENST00000521559 S100A7L2Q5SY68 101 aa1.85□□□□□ -2.11
VPS13B-209ENST00000521559 SPINK6Q6UWN8 80 aa1.85□□□□□ -2.11
VPS13B-209ENST00000521559 C2orf91Q6ZV80 131 aa1.85□□□□□ -2.11
VPS13B-209ENST00000521559 OR13C6PQ8NH95 151 aa1.85□□□□□ -2.11
VPS13B-209ENST00000521559 TMEM126AQ9H061 195 aa1.85□□□□□ -2.11
VPS13B-209ENST00000521559 CBY1Q9Y3M2 126 aa1.85□□□□□ -2.11
VPS13B-209ENST00000521559 VPS13DQ5THJ4 4388 aa1.84□□□□□ -2.11
VPS13B-209ENST00000521559 PLECQ15149 4684 aaKnown RBP1.84□□□□□ -2.11
VPS13B-209ENST00000521559 KMT2CQ8NEZ4 4911 aaKnown RBP1.84□□□□□ -2.11
VPS13B-209ENST00000521559 TRAV13-2A0A0B4J235 113 aa1.84□□□□□ -2.11
VPS13B-209ENST00000521559 A6NDN8 102 aa1.84□□□□□ -2.11
VPS13B-209ENST00000521559 SPRR1AP35321 89 aa1.84□□□□□ -2.11
VPS13B-209ENST00000521559 RPL28P46779 137 aaKnown RBP1.84□□□□□ -2.11
VPS13B-209ENST00000521559 KRTAP10-10P60014 251 aa1.84□□□□□ -2.11
VPS13B-209ENST00000521559 HSD52Q0P140 79 aa1.84□□□□□ -2.11
VPS13B-209ENST00000521559 KRTAP13-1Q8IUC0 172 aa1.84□□□□□ -2.11
VPS13B-209ENST00000521559 LINC00337Q8N6G1 96 aa1.84□□□□□ -2.11
VPS13B-209ENST00000521559 DIRC1Q969H9 104 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 225 ms