RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 S100A7L2Q5SY68 101 aa12.36□□□□□ -0.43
HOXA3-204ENST00000521401 Q6ZRX8 168 aa12.36□□□□□ -0.43
HOXA3-204ENST00000521401 SPAG11AQ6PDA7 123 aa12.35□□□□□ -0.43
HOXA3-204ENST00000521401 TTTY13Q9BZ97 58 aa12.35□□□□□ -0.43
HOXA3-204ENST00000521401 TRAV23DV6A0A075B6W5 121 aa12.34□□□□□ -0.43
HOXA3-204ENST00000521401 TIMM17BO60830 172 aa12.34□□□□□ -0.43
HOXA3-204ENST00000521401 GAGE2AQ6NT46 116 aa12.34□□□□□ -0.43
HOXA3-204ENST00000521401 LINC00308Q8TCZ7 52 aa12.34□□□□□ -0.43
HOXA3-204ENST00000521401 Q8NBF4 154 aa12.33□□□□□ -0.44
HOXA3-204ENST00000521401 ZNF815PA8K554 130 aa12.32□□□□□ -0.44
HOXA3-204ENST00000521401 KRTDAPP60985 99 aa12.31□□□□□ -0.44
HOXA3-204ENST00000521401 IGLV7-46A0A075B6I9 117 aa12.3□□□□□ -0.44
HOXA3-204ENST00000521401 ZNF73O43830 326 aaPredicted RBP12.3□□□□□ -0.44
HOXA3-204ENST00000521401 SPANXCQ9NY87 97 aa12.3□□□□□ -0.44
HOXA3-204ENST00000521401 TPRXLQ17RH7 258 aa12.28□□□□□ -0.44
HOXA3-204ENST00000521401 C4orf48Q5BLP8 95 aa12.27□□□□□ -0.45
HOXA3-204ENST00000521401 JOSD1Q15040 202 aaPredicted RBP12.26□□□□□ -0.45
HOXA3-204ENST00000521401 MOBPQ13875 183 aa12.25□□□□□ -0.45
HOXA3-204ENST00000521401 ANKRD39Q53RE8 183 aa12.25□□□□□ -0.45
HOXA3-204ENST00000521401 IGLV9-49A0A0B4J1Y8 123 aa12.24□□□□□ -0.45
HOXA3-204ENST00000521401 SPINK1P00995 79 aa12.23□□□□□ -0.45
HOXA3-204ENST00000521401 SSBP3-AS1Q7Z2R9 100 aa12.23□□□□□ -0.45
HOXA3-204ENST00000521401 ST20-AS1Q8NBB2 130 aa12.23□□□□□ -0.45
HOXA3-204ENST00000521401 OR13C6PQ8NH95 151 aa12.22□□□□□ -0.45
HOXA3-204ENST00000521401 SPANXDQ9BXN6 97 aa12.22□□□□□ -0.45
HOXA3-204ENST00000521401 CBY1Q9Y3M2 126 aa12.22□□□□□ -0.45
HOXA3-204ENST00000521401 C20orf202A1L168 122 aa12.21□□□□□ -0.45
HOXA3-204ENST00000521401 ATOH7Q8N100 152 aa12.21□□□□□ -0.45
HOXA3-204ENST00000521401 FP248Q71RG6 208 aaPredicted RBP12.2□□□□□ -0.46
HOXA3-204ENST00000521401 CDIP1Q9H305 208 aa12.2□□□□□ -0.46
HOXA3-204ENST00000521401 HINT1P49773 126 aaPredicted RBP12.19□□□□□ -0.46
HOXA3-204ENST00000521401 C5orf52A6NGY3 159 aa12.18□□□□□ -0.46
HOXA3-204ENST00000521401 LINC00518Q8N0U6 118 aa12.18□□□□□ -0.46
HOXA3-204ENST00000521401 SCGB1D4Q6XE38 83 aa12.17□□□□□ -0.46
HOXA3-204ENST00000521401 RPS29P62273 56 aaKnown RBP12.16□□□□□ -0.46
HOXA3-204ENST00000521401 PCP2Q8IVA1 136 aa12.16□□□□□ -0.46
HOXA3-204ENST00000521401 FAT4Q6V0I7 4981 aa12.14□□□□□ -0.47
HOXA3-204ENST00000521401 SPRR1BP22528 89 aa12.14□□□□□ -0.47
HOXA3-204ENST00000521401 ELOF1P60002 83 aaKnown RBP12.14□□□□□ -0.47
HOXA3-204ENST00000521401 C6orf99Q4VX62 202 aa12.14□□□□□ -0.47
HOXA3-204ENST00000521401 Q8N377 158 aa12.14□□□□□ -0.47
HOXA3-204ENST00000521401 HIST3H2BBQ8N257 126 aa12.13□□□□□ -0.47
HOXA3-204ENST00000521401 DHRS4-AS1Q9P1J3 65 aa12.13□□□□□ -0.47
HOXA3-204ENST00000521401 IFITM1P13164 125 aa12.12□□□□□ -0.47
HOXA3-204ENST00000521401 KRTAP13-3Q3SY46 172 aa12.12□□□□□ -0.47
HOXA3-204ENST00000521401 C9orf153Q5TBE3 101 aa12.12□□□□□ -0.47
HOXA3-204ENST00000521401 COX7BP24311 80 aa12.11□□□□□ -0.47
HOXA3-204ENST00000521401 AKR1D1P51857 326 aa12.11□□□□□ -0.47
HOXA3-204ENST00000521401 Q6ZVH6 145 aa12.11□□□□□ -0.47
HOXA3-204ENST00000521401 MUSTN1Q8IVN3 82 aa12.11□□□□□ -0.47
HOXA3-204ENST00000521401 HIST1H2BLQ99880 126 aa12.1□□□□□ -0.47
HOXA3-204ENST00000521401 SNRPEP62304 92 aaKnown RBP12.08□□□□□ -0.48
HOXA3-204ENST00000521401 COPS9Q8WXC6 57 aa12.08□□□□□ -0.48
HOXA3-204ENST00000521401 S100A1P23297 94 aa12.07□□□□□ -0.48
HOXA3-204ENST00000521401 TRBV7-6A0A0J9YX20 115 aa12.05□□□□□ -0.48
HOXA3-204ENST00000521401 SLC25A20O43772 301 aa12.05□□□□□ -0.48
HOXA3-204ENST00000521401 A6NDN8 102 aa12.04□□□□□ -0.48
HOXA3-204ENST00000521401 S100A2P29034 98 aa12.04□□□□□ -0.48
HOXA3-204ENST00000521401 A0A0U1RQV1 116 aa12.03□□□□□ -0.48
HOXA3-204ENST00000521401 SLC25A34Q6PIV7 304 aa12.03□□□□□ -0.48
HOXA3-204ENST00000521401 LAMTOR3Q9UHA4 124 aa12.02□□□□□ -0.49
HOXA3-204ENST00000521401 A0A1B0GWB2 263 aa12.01□□□□□ -0.49
HOXA3-204ENST00000521401 TAL2Q16559 108 aa12□□□□□ -0.49
HOXA3-204ENST00000521401 LINC01547P58512 204 aaPredicted RBP11.99□□□□□ -0.49
HOXA3-204ENST00000521401 DEFB105AQ8NG35 78 aa11.99□□□□□ -0.49
HOXA3-204ENST00000521401 TRAV13-2A0A0B4J235 113 aa11.98□□□□□ -0.49
HOXA3-204ENST00000521401 TEX49A0A1B0GTD5 131 aa11.98□□□□□ -0.49
HOXA3-204ENST00000521401 SMIM29Q86T20 159 aa11.98□□□□□ -0.49
HOXA3-204ENST00000521401 SMIM11BQ8TCY0 68 aa11.98□□□□□ -0.49
HOXA3-204ENST00000521401 Q1RN00 199 aa11.97□□□□□ -0.49
HOXA3-204ENST00000521401 IGLV5-48A0A075B6I7 105 aa11.96□□□□□ -0.49
HOXA3-204ENST00000521401 ASB16-AS1Q495Z4 193 aa11.96□□□□□ -0.49
HOXA3-204ENST00000521401 HRCT1Q6UXD1 115 aa11.96□□□□□ -0.49
HOXA3-204ENST00000521401 HSBP1L1C9JCN9 74 aa11.95□□□□□ -0.5
HOXA3-204ENST00000521401 S100A6P06703 90 aa11.95□□□□□ -0.5
HOXA3-204ENST00000521401 LCE2AQ5TA79 106 aaPredicted RBP11.94□□□□□ -0.5
HOXA3-204ENST00000521401 A4D1N5 150 aa11.93□□□□□ -0.5
HOXA3-204ENST00000521401 LIMD2Q9BT23 127 aa11.91□□□□□ -0.5
HOXA3-204ENST00000521401 PRO1933Q9H354 126 aa11.91□□□□□ -0.5
HOXA3-204ENST00000521401 CD164Q04900 197 aa11.9□□□□□ -0.5
HOXA3-204ENST00000521401 XP32Q5T750 250 aa11.89□□□□□ -0.51
HOXA3-204ENST00000521401 KRTAP4-1Q9BYQ7 146 aa11.89□□□□□ -0.51
HOXA3-204ENST00000521401 SCGB1D1O95968 90 aa11.87□□□□□ -0.51
HOXA3-204ENST00000521401 NHP2Q9NX24 153 aaKnown RBP11.87□□□□□ -0.51
HOXA3-204ENST00000521401 SEC61BP60468 96 aaKnown RBP11.86□□□□□ -0.51
HOXA3-204ENST00000521401 A0A0G2JQZ4 141 aa11.85□□□□□ -0.51
HOXA3-204ENST00000521401 LINC00575Q6W349 94 aa11.84□□□□□ -0.51
HOXA3-204ENST00000521401 H7C2G1 150 aa11.83□□□□□ -0.52
HOXA3-204ENST00000521401 COX8AP10176 69 aa11.83□□□□□ -0.52
HOXA3-204ENST00000521401 Q5XG85 94 aa11.83□□□□□ -0.52
HOXA3-204ENST00000521401 VAMP3Q15836 100 aa11.82□□□□□ -0.52
HOXA3-204ENST00000521401 DLEU1O43261 78 aa11.79□□□□□ -0.52
HOXA3-204ENST00000521401 HIST1H4GQ99525 98 aa11.79□□□□□ -0.52
HOXA3-204ENST00000521401 C12orf57Q99622 126 aa11.79□□□□□ -0.52
HOXA3-204ENST00000521401 hADV29S1A0JD25 119 aa11.77□□□□□ -0.53
HOXA3-204ENST00000521401 C1orf195Q5TG92 126 aa11.76□□□□□ -0.53
HOXA3-204ENST00000521401 Q6ZQY7 126 aa11.76□□□□□ -0.53
HOXA3-204ENST00000521401 C9orf92A6NGG3 77 aa11.74□□□□□ -0.53
HOXA3-204ENST00000521401 C14orf144Q96I85 54 aa11.73□□□□□ -0.53
HOXA3-204ENST00000521401 PAM16Q9Y3D7 125 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms