RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 CELSR3Q9NYQ7 3312 aa-0.25□□□□□ -2.45
SKP1-207ENST00000520417 NBPF19A0A087WUL8 3843 aa-0.25□□□□□ -2.45
SKP1-207ENST00000520417 NMSQ5H8A3 153 aa-0.25□□□□□ -2.45
SKP1-207ENST00000520417 LELP1Q5T871 98 aa-0.25□□□□□ -2.45
SKP1-207ENST00000520417 SNHG12Q9BXW3 62 aa-0.25□□□□□ -2.45
SKP1-207ENST00000520417 Q9H521 79 aa-0.25□□□□□ -2.45
SKP1-207ENST00000520417 SLIT1O75093 1534 aa-0.25□□□□□ -2.45
SKP1-207ENST00000520417 PAPPA2Q9BXP8 1791 aa-0.25□□□□□ -2.45
SKP1-207ENST00000520417 SVEP1Q4LDE5 3571 aa-0.25□□□□□ -2.45
SKP1-207ENST00000520417 DNAH7Q8WXX0 4024 aa-0.26□□□□□ -2.45
SKP1-207ENST00000520417 MXRA5Q9NR99 2828 aa-0.26□□□□□ -2.45
SKP1-207ENST00000520417 ITPR1Q14643 2758 aa-0.26□□□□□ -2.45
SKP1-207ENST00000520417 LRRK2Q5S007 2527 aa-0.26□□□□□ -2.45
SKP1-207ENST00000520417 PLGLAQ15195 96 aa-0.26□□□□□ -2.45
SKP1-207ENST00000520417 KRTAP19-7Q3SYF9 63 aa-0.26□□□□□ -2.45
SKP1-207ENST00000520417 UBR3Q6ZT12 1888 aa-0.27□□□□□ -2.45
SKP1-207ENST00000520417 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.27□□□□□ -2.456e-6■□□□□ 9.4
SKP1-207ENST00000520417 KNL1Q8NG31 2342 aa-0.27□□□□□ -2.45
SKP1-207ENST00000520417 A0A1B0GUT8 65 aa-0.27□□□□□ -2.45
SKP1-207ENST00000520417 IQCF6A8MYZ5 107 aa-0.27□□□□□ -2.45
SKP1-207ENST00000520417 H0YGG7 62 aa-0.27□□□□□ -2.45
SKP1-207ENST00000520417 CYB5AP00167 134 aa-0.27□□□□□ -2.45
SKP1-207ENST00000520417 HMGN2P05204 90 aaKnown RBP-0.27□□□□□ -2.45
SKP1-207ENST00000520417 COX7BP24311 80 aa-0.27□□□□□ -2.45
SKP1-207ENST00000520417 RPL38P63173 70 aaKnown RBP-0.27□□□□□ -2.45
SKP1-207ENST00000520417 GAFA1Q96PS6 74 aa-0.27□□□□□ -2.45
SKP1-207ENST00000520417 C20orf78Q9BR46 151 aa-0.27□□□□□ -2.45
SKP1-207ENST00000520417 DNAH1Q9P2D7 4330 aa-0.27□□□□□ -2.45
SKP1-207ENST00000520417 LRRC37AA6NMS7 1700 aa-0.27□□□□□ -2.45
SKP1-207ENST00000520417 LAMA5O15230 3695 aa-0.27□□□□□ -2.45
SKP1-207ENST00000520417 TNRC18O15417 2968 aaPredicted RBP-0.27□□□□□ -2.45
SKP1-207ENST00000520417 TARBP1Q13395 1621 aaKnown RBP-0.27□□□□□ -2.45
SKP1-207ENST00000520417 SAMD9Q5K651 1589 aa-0.28□□□□□ -2.45
SKP1-207ENST00000520417 FLGP20930 4061 aaPredicted RBP-0.28□□□□□ -2.45
SKP1-207ENST00000520417 CEP295Q9C0D2 2601 aa-0.28□□□□□ -2.45
SKP1-207ENST00000520417 KIF20BQ96Q89 1820 aa-0.28□□□□□ -2.45
SKP1-207ENST00000520417 UBE2D4Q9Y2X8 147 aa-0.28□□□□□ -2.45
SKP1-207ENST00000520417 TLN1Q9Y490 2541 aaKnown RBP-0.28□□□□□ -2.45
SKP1-207ENST00000520417 TACC2O95359 2948 aa-0.28□□□□□ -2.45
SKP1-207ENST00000520417 MYH4Q9Y623 1939 aa-0.28□□□□□ -2.46
SKP1-207ENST00000520417 HTTP42858 3142 aa-0.29□□□□□ -2.46
SKP1-207ENST00000520417 ITPR3Q14573 2671 aa-0.29□□□□□ -2.46
SKP1-207ENST00000520417 GCN1Q92616 2671 aaKnown RBP-0.29□□□□□ -2.46
SKP1-207ENST00000520417 DYNC1H1Q14204 4646 aaKnown RBP-0.29□□□□□ -2.46
SKP1-207ENST00000520417 COL14A1Q05707 1796 aaKnown RBP-0.29□□□□□ -2.46
SKP1-207ENST00000520417 MON2Q7Z3U7 1717 aa-0.29□□□□□ -2.46
SKP1-207ENST00000520417 PLECQ15149 4684 aaKnown RBP-0.29□□□□□ -2.46
SKP1-207ENST00000520417 SHPRHQ149N8 1683 aa-0.29□□□□□ -2.46
SKP1-207ENST00000520417 KRTAP19-8Q3LI54 63 aa-0.29□□□□□ -2.46
SKP1-207ENST00000520417 PYY3Q5JQD4 70 aa-0.29□□□□□ -2.46
SKP1-207ENST00000520417 ABCC10Q5T3U5 1492 aa-0.29□□□□□ -2.46
SKP1-207ENST00000520417 PDE4DIPQ5VU43 2346 aa-0.3□□□□□ -2.46
SKP1-207ENST00000520417 CFAP46Q8IYW2 2715 aa-0.3□□□□□ -2.46
SKP1-207ENST00000520417 NDUFA3O95167 84 aa-0.3□□□□□ -2.46
SKP1-207ENST00000520417 CUX1P39880 1505 aa-0.3□□□□□ -2.46
SKP1-207ENST00000520417 SACSQ9NZJ4 4579 aa-0.3□□□□□ -2.46
SKP1-207ENST00000520417 C5P01031 1676 aa-0.3□□□□□ -2.46
SKP1-207ENST00000520417 WDR87Q6ZQQ6 2873 aa-0.31□□□□□ -2.46
SKP1-207ENST00000520417 PKHD1P08F94 4074 aa-0.31□□□□□ -2.46
SKP1-207ENST00000520417 LAMA1P25391 3075 aa-0.31□□□□□ -2.46
SKP1-207ENST00000520417 SPRR2EP22531 72 aa-0.31□□□□□ -2.46
SKP1-207ENST00000520417 SPRR2AP35326 72 aa-0.31□□□□□ -2.46
SKP1-207ENST00000520417 WFDC9Q8NEX5 89 aa-0.31□□□□□ -2.46
SKP1-207ENST00000520417 S100A16Q96FQ6 103 aaKnown RBP-0.31□□□□□ -2.46
SKP1-207ENST00000520417 ATP10BO94823 1461 aa-0.31□□□□□ -2.46
SKP1-207ENST00000520417 NBASA2RRP1 2371 aa-0.31□□□□□ -2.46
SKP1-207ENST00000520417 PKD1P98161 4303 aa-0.31□□□□□ -2.46
SKP1-207ENST00000520417 ITPR2Q14571 2701 aa-0.31□□□□□ -2.46
SKP1-207ENST00000520417 KALRNO60229 2985 aa-0.32□□□□□ -2.46
SKP1-207ENST00000520417 TRAV21A0A0B4J279 112 aa-0.32□□□□□ -2.46
SKP1-207ENST00000520417 MYMXA0A1B0GTQ4 84 aa-0.32□□□□□ -2.46
SKP1-207ENST00000520417 COX6B2Q6YFQ2 88 aa-0.32□□□□□ -2.46
SKP1-207ENST00000520417 V9GYS6 101 aa-0.32□□□□□ -2.46
SKP1-207ENST00000520417 DMXL1Q9Y485 3027 aa-0.32□□□□□ -2.46
SKP1-207ENST00000520417 ZZEF1O43149 2961 aa-0.32□□□□□ -2.46
SKP1-207ENST00000520417 VPS8Q8N3P4 1428 aa-0.32□□□□□ -2.46
SKP1-207ENST00000520417 MUC17Q685J3 4493 aa-0.32□□□□□ -2.46
SKP1-207ENST00000520417 WDFY4Q6ZS81 3184 aa-0.33□□□□□ -2.46
SKP1-207ENST00000520417 TEX15Q9BXT5 2789 aa-0.33□□□□□ -2.46
SKP1-207ENST00000520417 CLTCQ00610 1675 aaKnown RBP-0.33□□□□□ -2.46
SKP1-207ENST00000520417 MAGI2Q86UL8 1455 aa-0.33□□□□□ -2.46
SKP1-207ENST00000520417 KRTAP6-2Q3LI66 62 aa-0.33□□□□□ -2.46
SKP1-207ENST00000520417 DNAH5Q8TE73 4624 aa-0.33□□□□□ -2.46
SKP1-207ENST00000520417 PEG3Q9GZU2 1588 aa-0.33□□□□□ -2.46
SKP1-207ENST00000520417 CRYBG1Q9Y4K1 1723 aa-0.33□□□□□ -2.46
SKP1-207ENST00000520417 FAM186AA6NE01 2351 aa-0.33□□□□□ -2.46
SKP1-207ENST00000520417 EPRSP07814 1512 aaKnown RBP-0.33□□□□□ -2.46
SKP1-207ENST00000520417 VPS13BQ7Z7G8 4022 aa-0.34□□□□□ -2.46
SKP1-207ENST00000520417 SPG11Q96JI7 2443 aa-0.34□□□□□ -2.46
SKP1-207ENST00000520417 MYO9AB2RTY4 2548 aa-0.34□□□□□ -2.46
SKP1-207ENST00000520417 CEBPZOSA8MTT3 80 aa-0.34□□□□□ -2.46
SKP1-207ENST00000520417 SNRPFP62306 86 aaKnown RBP-0.34□□□□□ -2.46
SKP1-207ENST00000520417 DCHS1Q96JQ0 3298 aa-0.34□□□□□ -2.46
SKP1-207ENST00000520417 NEXMIFQ5QGS0 1516 aa-0.34□□□□□ -2.46
SKP1-207ENST00000520417 AKAP9Q99996 3911 aa-0.34□□□□□ -2.46
SKP1-207ENST00000520417 BCORQ6W2J9 1755 aa-0.34□□□□□ -2.46
SKP1-207ENST00000520417 APOBP04114 4563 aaKnown RBP-0.35□□□□□ -2.46
SKP1-207ENST00000520417 UNC80Q8N2C7 3258 aa-0.35□□□□□ -2.46
SKP1-207ENST00000520417 TLN2Q9Y4G6 2542 aa-0.35□□□□□ -2.47
SKP1-207ENST00000520417 LINC00643Q86TS7 51 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms