RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 SERP2Q8N6R1 65 aa3.75□□□□□ -1.81
CTNNA1-220ENST00000520260 ZNF625Q96I27 306 aaPredicted RBP3.75□□□□□ -1.81
CTNNA1-220ENST00000520260 CDKN2A-AS1Q9UH64 79 aa3.75□□□□□ -1.81
CTNNA1-220ENST00000520260 DYNC2H1Q8NCM8 4307 aaKnown RBP3.74□□□□□ -1.81
CTNNA1-220ENST00000520260 NDUFC2-KCTD14E9PQ53 114 aa3.74□□□□□ -1.81
CTNNA1-220ENST00000520260 NPC2P61916 151 aa3.74□□□□□ -1.81
CTNNA1-220ENST00000520260 KMT2CQ8NEZ4 4911 aaKnown RBP3.74□□□□□ -1.81
CTNNA1-220ENST00000520260 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.73□□□□□ -1.81
CTNNA1-220ENST00000520260 GVQW2A0A096LPI5 108 aaPredicted RBP3.73□□□□□ -1.81
CTNNA1-220ENST00000520260 LOC107984640A0A0U1RRK4 108 aa3.73□□□□□ -1.81
CTNNA1-220ENST00000520260 SMIM1B2RUZ4 78 aa3.73□□□□□ -1.81
CTNNA1-220ENST00000520260 H0YGX0 51 aa3.73□□□□□ -1.81
CTNNA1-220ENST00000520260 CDK2AP2O75956 126 aa3.73□□□□□ -1.81
CTNNA1-220ENST00000520260 CNBPP62633 177 aaKnown RBP3.73□□□□□ -1.81
CTNNA1-220ENST00000520260 LINC00242Q5T6M2 205 aa3.73□□□□□ -1.81
CTNNA1-220ENST00000520260 DPH3Q96FX2 82 aa3.73□□□□□ -1.81
CTNNA1-220ENST00000520260 FAM218AQ96MZ4 157 aa3.73□□□□□ -1.81
CTNNA1-220ENST00000520260 CAMK2N2Q96S95 79 aa3.73□□□□□ -1.81
CTNNA1-220ENST00000520260 LYSTQ99698 3801 aa3.72□□□□□ -1.81
CTNNA1-220ENST00000520260 A0A087WZ39 114 aa3.72□□□□□ -1.81
CTNNA1-220ENST00000520260 hADV29S1A0JD25 119 aa3.72□□□□□ -1.81
CTNNA1-220ENST00000520260 LRCOL1A6NCL2 159 aa3.72□□□□□ -1.81
CTNNA1-220ENST00000520260 LECT2O14960 151 aa3.72□□□□□ -1.81
CTNNA1-220ENST00000520260 BCE1O60756 84 aa3.72□□□□□ -1.81
CTNNA1-220ENST00000520260 DNAL4O96015 105 aa3.72□□□□□ -1.81
CTNNA1-220ENST00000520260 COX6A2Q02221 97 aa3.72□□□□□ -1.81
CTNNA1-220ENST00000520260 SPAG11BQ08648 103 aa3.72□□□□□ -1.81
CTNNA1-220ENST00000520260 RNASE13Q5GAN3 156 aaKnown RBP3.72□□□□□ -1.81
CTNNA1-220ENST00000520260 C6orf226Q5I0X4 101 aa3.72□□□□□ -1.81
CTNNA1-220ENST00000520260 S100A7L2Q5SY68 101 aa3.72□□□□□ -1.81
CTNNA1-220ENST00000520260 ATP5EP2Q5VTU8 51 aa3.72□□□□□ -1.81
CTNNA1-220ENST00000520260 A0A1B0GVY2 172 aa3.71□□□□□ -1.82
CTNNA1-220ENST00000520260 NDUFC2O95298 119 aa3.71□□□□□ -1.82
CTNNA1-220ENST00000520260 SYCNQ0VAF6 134 aa3.71□□□□□ -1.82
CTNNA1-220ENST00000520260 C7orf33Q8WU49 177 aa3.71□□□□□ -1.82
CTNNA1-220ENST00000520260 PLECQ15149 4684 aaKnown RBP3.71□□□□□ -1.82
CTNNA1-220ENST00000520260 RYR2Q92736 4967 aa3.7□□□□□ -1.82
CTNNA1-220ENST00000520260 TRBV10-3A0A0K0K1G6 114 aa3.7□□□□□ -1.82
CTNNA1-220ENST00000520260 PLA2G1BP04054 148 aaKnown RBP3.7□□□□□ -1.82
CTNNA1-220ENST00000520260 Q8IZM0 81 aa3.7□□□□□ -1.82
CTNNA1-220ENST00000520260 C9orf163Q8N9P6 203 aa3.7□□□□□ -1.82
CTNNA1-220ENST00000520260 LINC00167Q96N53 147 aa3.7□□□□□ -1.82
CTNNA1-220ENST00000520260 DNAH1Q9P2D7 4330 aa3.7□□□□□ -1.82
CTNNA1-220ENST00000520260 IGKV2-28A0A075B6P5 120 aa3.69□□□□□ -1.82
CTNNA1-220ENST00000520260 IGHV3OR16-9A0A0B4J2B5 98 aa3.69□□□□□ -1.82
CTNNA1-220ENST00000520260 EPM2AB3EWF7 344 aa3.69□□□□□ -1.82
CTNNA1-220ENST00000520260 IGKV2D-28P01615 120 aa3.69□□□□□ -1.82
CTNNA1-220ENST00000520260 CCKP06307 115 aa3.69□□□□□ -1.82
CTNNA1-220ENST00000520260 HIGD2BQ4VC39 106 aa3.69□□□□□ -1.82
CTNNA1-220ENST00000520260 LINC00337Q8N6G1 96 aa3.69□□□□□ -1.82
CTNNA1-220ENST00000520260 SMIM11BQ8TCY0 68 aa3.69□□□□□ -1.82
CTNNA1-220ENST00000520260 CYSTM1Q9H1C7 97 aa3.69□□□□□ -1.82
CTNNA1-220ENST00000520260 SND1-IT1Q9HBX3 110 aa3.69□□□□□ -1.82
CTNNA1-220ENST00000520260 LINC00846Q9NV44 126 aa3.69□□□□□ -1.82
CTNNA1-220ENST00000520260 TOMM7Q9P0U1 55 aa3.69□□□□□ -1.82
CTNNA1-220ENST00000520260 DNAH6Q9C0G6 4158 aa3.69□□□□□ -1.82
CTNNA1-220ENST00000520260 A0A087WYN8 130 aa3.68□□□□□ -1.82
CTNNA1-220ENST00000520260 IGKV3D-7A0A0C4DH55 119 aa3.68□□□□□ -1.82
CTNNA1-220ENST00000520260 JMJD7-PLA2G4BH0Y9G9 81 aa3.68□□□□□ -1.82
CTNNA1-220ENST00000520260 OXTP01178 125 aa3.68□□□□□ -1.82
CTNNA1-220ENST00000520260 Q5XG85 94 aa3.68□□□□□ -1.82
CTNNA1-220ENST00000520260 COX7B2Q8TF08 81 aa3.68□□□□□ -1.82
CTNNA1-220ENST00000520260 C14orf132Q9NPU4 83 aa3.68□□□□□ -1.82
CTNNA1-220ENST00000520260 A0A0U1RRA0 63 aa3.67□□□□□ -1.82
CTNNA1-220ENST00000520260 KRTAP10-2P60368 255 aa3.67□□□□□ -1.82
CTNNA1-220ENST00000520260 COX17Q14061 63 aa3.67□□□□□ -1.82
CTNNA1-220ENST00000520260 C9orf129Q5T035 196 aaKnown RBP3.67□□□□□ -1.82
CTNNA1-220ENST00000520260 MIR7-3HGQ8N6C7 128 aa3.67□□□□□ -1.82
CTNNA1-220ENST00000520260 C15orf56Q8N910 161 aa3.67□□□□□ -1.82
CTNNA1-220ENST00000520260 ORMDL1Q9P0S3 153 aa3.67□□□□□ -1.82
CTNNA1-220ENST00000520260 VPS13DQ5THJ4 4388 aa3.67□□□□□ -1.82
CTNNA1-220ENST00000520260 KRTAP26-1Q6PEX3 210 aa3.66□□□□□ -1.82
CTNNA1-220ENST00000520260 DSCR8Q96T75 97 aa3.66□□□□□ -1.82
CTNNA1-220ENST00000520260 SERP1Q9Y6X1 66 aa3.66□□□□□ -1.82
CTNNA1-220ENST00000520260 SACSQ9NZJ4 4579 aa3.66□□□□□ -1.82
CTNNA1-220ENST00000520260 KMT2AQ03164 3969 aa3.66□□□□□ -1.82
CTNNA1-220ENST00000520260 TRAV7A0A075B6U4 112 aa3.65□□□□□ -1.83
CTNNA1-220ENST00000520260 A0A087WVE0 104 aa3.65□□□□□ -1.83
CTNNA1-220ENST00000520260 TLX1NBP0CAT3 122 aa3.65□□□□□ -1.83
CTNNA1-220ENST00000520260 LINC00158P58513 81 aa3.65□□□□□ -1.83
CTNNA1-220ENST00000520260 RYR3Q15413 4870 aa3.65□□□□□ -1.83
CTNNA1-220ENST00000520260 IGKV2-24A0A0C4DH68 120 aa3.64□□□□□ -1.83
CTNNA1-220ENST00000520260 FAM236DA0A1B0GTK5 79 aa3.64□□□□□ -1.83
CTNNA1-220ENST00000520260 TMEM256-PLSCR3K7ERE1 68 aa3.64□□□□□ -1.83
CTNNA1-220ENST00000520260 NCR3O14931 201 aa3.64□□□□□ -1.83
CTNNA1-220ENST00000520260 FAM236CP0DP71 79 aa3.64□□□□□ -1.83
CTNNA1-220ENST00000520260 C4orf26Q17RF5 130 aa3.64□□□□□ -1.83
CTNNA1-220ENST00000520260 Q6ZRU5 148 aa3.64□□□□□ -1.83
CTNNA1-220ENST00000520260 Q6ZSA8 131 aa3.64□□□□□ -1.83
CTNNA1-220ENST00000520260 LOC110117498A0A087WWA1 95 aa3.63□□□□□ -1.83
CTNNA1-220ENST00000520260 H3BQ85 93 aa3.63□□□□□ -1.83
CTNNA1-220ENST00000520260 KRTAP10-1P60331 282 aa3.63□□□□□ -1.83
CTNNA1-220ENST00000520260 HRCT1Q6UXD1 115 aa3.63□□□□□ -1.83
CTNNA1-220ENST00000520260 Q8N1X5 172 aa3.63□□□□□ -1.83
CTNNA1-220ENST00000520260 NKAPP1Q8N9T2 125 aa3.63□□□□□ -1.83
CTNNA1-220ENST00000520260 SPACA4Q8TDM5 124 aa3.63□□□□□ -1.83
CTNNA1-220ENST00000520260 UBL5Q9BZL1 73 aa3.63□□□□□ -1.83
CTNNA1-220ENST00000520260 HYDINQ4G0P3 5121 aa3.63□□□□□ -1.83
CTNNA1-220ENST00000520260 SMIM26A0A096LP01 95 aa3.62□□□□□ -1.83
CTNNA1-220ENST00000520260 H7BZZ5 65 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms