RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 C20orf202A1L168 122 aa7.73□□□□□ -1.17
VEGFA-219ENST00000518824 S100A7L2Q5SY68 101 aa7.73□□□□□ -1.17
VEGFA-219ENST00000518824 TRAV23DV6A0A075B6W5 121 aa7.71□□□□□ -1.18
VEGFA-219ENST00000518824 PRR4Q16378 134 aa7.71□□□□□ -1.18
VEGFA-219ENST00000518824 Q6ZRX8 168 aa7.71□□□□□ -1.18
VEGFA-219ENST00000518824 LINC00304Q8N9R0 145 aa7.71□□□□□ -1.18
VEGFA-219ENST00000518824 SPANXCQ9NY87 97 aa7.71□□□□□ -1.18
VEGFA-219ENST00000518824 RETNLBQ9BQ08 111 aa7.7□□□□□ -1.18
VEGFA-219ENST00000518824 ZNF73O43830 326 aaPredicted RBP7.69□□□□□ -1.18
VEGFA-219ENST00000518824 S100A2P29034 98 aa7.69□□□□□ -1.18
VEGFA-219ENST00000518824 SNRPEP62304 92 aaKnown RBP7.69□□□□□ -1.18
VEGFA-219ENST00000518824 GAGE2AQ6NT46 116 aa7.69□□□□□ -1.18
VEGFA-219ENST00000518824 SCGB1D4Q6XE38 83 aa7.69□□□□□ -1.18
VEGFA-219ENST00000518824 SPANXDQ9BXN6 97 aa7.69□□□□□ -1.18
VEGFA-219ENST00000518824 S100A12P80511 92 aa7.68□□□□□ -1.18
VEGFA-219ENST00000518824 OR13C6PQ8NH95 151 aa7.68□□□□□ -1.18
VEGFA-219ENST00000518824 LINC00483Q53H64 154 aa7.67□□□□□ -1.18
VEGFA-219ENST00000518824 ST20-AS1Q8NBB2 130 aa7.67□□□□□ -1.18
VEGFA-219ENST00000518824 ZNF706Q9Y5V0 76 aaPredicted RBP7.67□□□□□ -1.18
VEGFA-219ENST00000518824 S100A6P06703 90 aa7.66□□□□□ -1.18
VEGFA-219ENST00000518824 MUSTN1Q8IVN3 82 aa7.66□□□□□ -1.18
VEGFA-219ENST00000518824 C5orf52A6NGY3 159 aa7.64□□□□□ -1.19
VEGFA-219ENST00000518824 Q8NBF4 154 aa7.64□□□□□ -1.19
VEGFA-219ENST00000518824 IGLV9-49A0A0B4J1Y8 123 aa7.63□□□□□ -1.19
VEGFA-219ENST00000518824 MOBPQ13875 183 aa7.62□□□□□ -1.19
VEGFA-219ENST00000518824 C6orf99Q4VX62 202 aa7.62□□□□□ -1.19
VEGFA-219ENST00000518824 IFITM1P13164 125 aa7.61□□□□□ -1.19
VEGFA-219ENST00000518824 LINC00518Q8N0U6 118 aa7.61□□□□□ -1.19
VEGFA-219ENST00000518824 SCGB1D1O95968 90 aa7.6□□□□□ -1.19
VEGFA-219ENST00000518824 AKR1D1P51857 326 aa7.6□□□□□ -1.19
VEGFA-219ENST00000518824 JOSD1Q15040 202 aaPredicted RBP7.6□□□□□ -1.19
VEGFA-219ENST00000518824 ELOF1P60002 83 aaKnown RBP7.59□□□□□ -1.19
VEGFA-219ENST00000518824 A6NDN8 102 aa7.58□□□□□ -1.2
VEGFA-219ENST00000518824 COX7BP24311 80 aa7.58□□□□□ -1.2
VEGFA-219ENST00000518824 Q6ZVH6 145 aa7.58□□□□□ -1.2
VEGFA-219ENST00000518824 HSBP1L1C9JCN9 74 aa7.57□□□□□ -1.2
VEGFA-219ENST00000518824 HINT1P49773 126 aaPredicted RBP7.57□□□□□ -1.2
VEGFA-219ENST00000518824 SPAG11AQ6PDA7 123 aa7.57□□□□□ -1.2
VEGFA-219ENST00000518824 CBY1Q9Y3M2 126 aa7.56□□□□□ -1.2
VEGFA-219ENST00000518824 RNF213Q63HN8 5207 aa7.56□□□□□ -1.2
VEGFA-219ENST00000518824 C4orf48Q5BLP8 95 aa7.55□□□□□ -1.2
VEGFA-219ENST00000518824 SSBP3-AS1Q7Z2R9 100 aa7.55□□□□□ -1.2
VEGFA-219ENST00000518824 SMIM11BQ8TCY0 68 aa7.55□□□□□ -1.2
VEGFA-219ENST00000518824 COPS9Q8WXC6 57 aa7.55□□□□□ -1.2
VEGFA-219ENST00000518824 DHRS4-AS1Q9P1J3 65 aa7.55□□□□□ -1.2
VEGFA-219ENST00000518824 IGLV7-46A0A075B6I9 117 aa7.54□□□□□ -1.2
VEGFA-219ENST00000518824 A4D1N5 150 aa7.54□□□□□ -1.2
VEGFA-219ENST00000518824 SPRR1BP22528 89 aa7.54□□□□□ -1.2
VEGFA-219ENST00000518824 C9orf153Q5TBE3 101 aa7.54□□□□□ -1.2
VEGFA-219ENST00000518824 COX8AP10176 69 aa7.53□□□□□ -1.2
VEGFA-219ENST00000518824 CTAG1AP78358 180 aa7.53□□□□□ -1.2
VEGFA-219ENST00000518824 DEFB105AQ8NG35 78 aa7.53□□□□□ -1.2
VEGFA-219ENST00000518824 LINC01547P58512 204 aaPredicted RBP7.52□□□□□ -1.21
VEGFA-219ENST00000518824 C14orf144Q96I85 54 aa7.52□□□□□ -1.21
VEGFA-219ENST00000518824 C12orf57Q99622 126 aa7.52□□□□□ -1.21
VEGFA-219ENST00000518824 TRAV13-2A0A0B4J235 113 aa7.51□□□□□ -1.21
VEGFA-219ENST00000518824 TRBV7-6A0A0J9YX20 115 aa7.51□□□□□ -1.21
VEGFA-219ENST00000518824 A0A1B0GWB2 263 aa7.51□□□□□ -1.21
VEGFA-219ENST00000518824 SPINK1P00995 79 aa7.51□□□□□ -1.21
VEGFA-219ENST00000518824 Q8N377 158 aa7.51□□□□□ -1.21
VEGFA-219ENST00000518824 PAM16Q9Y3D7 125 aa7.51□□□□□ -1.21
VEGFA-219ENST00000518824 TPRXLQ17RH7 258 aa7.5□□□□□ -1.21
VEGFA-219ENST00000518824 Q1RN00 199 aa7.5□□□□□ -1.21
VEGFA-219ENST00000518824 SMIM29Q86T20 159 aa7.5□□□□□ -1.21
VEGFA-219ENST00000518824 TAL2Q16559 108 aa7.49□□□□□ -1.21
VEGFA-219ENST00000518824 SPATA45Q537H7 98 aa7.49□□□□□ -1.21
VEGFA-219ENST00000518824 A0A0G2JQZ4 141 aa7.48□□□□□ -1.21
VEGFA-219ENST00000518824 DLEU1O43261 78 aa7.48□□□□□ -1.21
VEGFA-219ENST00000518824 HRCT1Q6UXD1 115 aa7.48□□□□□ -1.21
VEGFA-219ENST00000518824 HIST1H4GQ99525 98 aa7.48□□□□□ -1.21
VEGFA-219ENST00000518824 C2orf91Q6ZV80 131 aa7.47□□□□□ -1.21
VEGFA-219ENST00000518824 IGLV5-48A0A075B6I7 105 aa7.46□□□□□ -1.22
VEGFA-219ENST00000518824 TEX49A0A1B0GTD5 131 aa7.46□□□□□ -1.22
VEGFA-219ENST00000518824 CDIP1Q9H305 208 aa7.46□□□□□ -1.22
VEGFA-219ENST00000518824 LAMTOR3Q9UHA4 124 aa7.46□□□□□ -1.22
VEGFA-219ENST00000518824 RPS29P62273 56 aaKnown RBP7.45□□□□□ -1.22
VEGFA-219ENST00000518824 KRTAP13-3Q3SY46 172 aa7.45□□□□□ -1.22
VEGFA-219ENST00000518824 FP248Q71RG6 208 aaPredicted RBP7.45□□□□□ -1.22
VEGFA-219ENST00000518824 VAMP8Q9BV40 100 aa7.45□□□□□ -1.22
VEGFA-219ENST00000518824 LINC00575Q6W349 94 aa7.44□□□□□ -1.22
VEGFA-219ENST00000518824 TMA7Q9Y2S6 64 aaKnown RBP7.44□□□□□ -1.22
VEGFA-219ENST00000518824 MUC17Q685J3 4493 aa7.44□□□□□ -1.22
VEGFA-219ENST00000518824 CFC1BP0CG36 223 aa7.43□□□□□ -1.22
VEGFA-219ENST00000518824 CFC1P0CG37 223 aa7.43□□□□□ -1.22
VEGFA-219ENST00000518824 PYY3Q5JQD4 70 aa7.43□□□□□ -1.22
VEGFA-219ENST00000518824 SLC25A34Q6PIV7 304 aa7.43□□□□□ -1.22
VEGFA-219ENST00000518824 SLC25A20O43772 301 aa7.42□□□□□ -1.22
VEGFA-219ENST00000518824 HIGD1BQ9P298 99 aa7.42□□□□□ -1.22
VEGFA-219ENST00000518824 H7C2G1 150 aa7.41□□□□□ -1.22
VEGFA-219ENST00000518824 Q6ZQY7 126 aa7.4□□□□□ -1.22
VEGFA-219ENST00000518824 MUC2Q02817 5179 aa7.4□□□□□ -1.23
VEGFA-219ENST00000518824 VAMP3Q15836 100 aa7.39□□□□□ -1.23
VEGFA-219ENST00000518824 PRO1933Q9H354 126 aa7.39□□□□□ -1.23
VEGFA-219ENST00000518824 NHP2Q9NX24 153 aaKnown RBP7.39□□□□□ -1.23
VEGFA-219ENST00000518824 hADV29S1A0JD25 119 aa7.38□□□□□ -1.23
VEGFA-219ENST00000518824 FXYD2P54710 66 aa7.37□□□□□ -1.23
VEGFA-219ENST00000518824 CEND1Q8N111 149 aa7.37□□□□□ -1.23
VEGFA-219ENST00000518824 A0A0B4J2C4 111 aa7.35□□□□□ -1.23
VEGFA-219ENST00000518824 CD164Q04900 197 aa7.35□□□□□ -1.23
VEGFA-219ENST00000518824 RAB37Q96AX2 223 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms