RNA–Protein interactions for RNA: ENST00000517924.5

LAPTM4B-202, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 5

Gene LAPTM4B, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-202ENST00000517924 COA6Q5JTJ3 125 aaKnown RBP14.13□□□□□ -0.15
LAPTM4B-202ENST00000517924 Q8NBF4 154 aa14.13□□□□□ -0.15
LAPTM4B-202ENST00000517924 TRAV23DV6A0A075B6W5 121 aa14.12□□□□□ -0.15
LAPTM4B-202ENST00000517924 ZNF815PA8K554 130 aa14.11□□□□□ -0.15
LAPTM4B-202ENST00000517924 KRTDAPP60985 99 aa14.11□□□□□ -0.15
LAPTM4B-202ENST00000517924 LINC00308Q8TCZ7 52 aa14.11□□□□□ -0.15
LAPTM4B-202ENST00000517924 CTAG1AP78358 180 aa14.09□□□□□ -0.15
LAPTM4B-202ENST00000517924 IGLV7-46A0A075B6I9 117 aa14.08□□□□□ -0.16
LAPTM4B-202ENST00000517924 TIMM17BO60830 172 aa14.08□□□□□ -0.16
LAPTM4B-202ENST00000517924 SPAG11AQ6PDA7 123 aa14.08□□□□□ -0.16
LAPTM4B-202ENST00000517924 ZNF73O43830 326 aaPredicted RBP14.07□□□□□ -0.16
LAPTM4B-202ENST00000517924 IGLV9-49A0A0B4J1Y8 123 aa14.06□□□□□ -0.16
LAPTM4B-202ENST00000517924 MOBPQ13875 183 aa14.05□□□□□ -0.16
LAPTM4B-202ENST00000517924 SPANXCQ9NY87 97 aa14.05□□□□□ -0.16
LAPTM4B-202ENST00000517924 C4orf48Q5BLP8 95 aa14.04□□□□□ -0.16
LAPTM4B-202ENST00000517924 TPRXLQ17RH7 258 aa14.03□□□□□ -0.16
LAPTM4B-202ENST00000517924 ATOH7Q8N100 152 aa14.03□□□□□ -0.16
LAPTM4B-202ENST00000517924 MUC2Q02817 5179 aa14.02□□□□□ -0.16
LAPTM4B-202ENST00000517924 ANKRD39Q53RE8 183 aa14.02□□□□□ -0.17
LAPTM4B-202ENST00000517924 ST20-AS1Q8NBB2 130 aa14.02□□□□□ -0.17
LAPTM4B-202ENST00000517924 OR13C6PQ8NH95 151 aa14.02□□□□□ -0.17
LAPTM4B-202ENST00000517924 JOSD1Q15040 202 aaPredicted RBP14□□□□□ -0.17
LAPTM4B-202ENST00000517924 CDIP1Q9H305 208 aa13.98□□□□□ -0.17
LAPTM4B-202ENST00000517924 C20orf202A1L168 122 aa13.96□□□□□ -0.17
LAPTM4B-202ENST00000517924 SPINK1P00995 79 aa13.95□□□□□ -0.18
LAPTM4B-202ENST00000517924 SPANXDQ9BXN6 97 aa13.95□□□□□ -0.18
LAPTM4B-202ENST00000517924 SCGB1D4Q6XE38 83 aa13.94□□□□□ -0.18
LAPTM4B-202ENST00000517924 SSBP3-AS1Q7Z2R9 100 aa13.94□□□□□ -0.18
LAPTM4B-202ENST00000517924 PCP2Q8IVA1 136 aa13.93□□□□□ -0.18
LAPTM4B-202ENST00000517924 HINT1P49773 126 aaPredicted RBP13.92□□□□□ -0.18
LAPTM4B-202ENST00000517924 CBY1Q9Y3M2 126 aa13.92□□□□□ -0.18
LAPTM4B-202ENST00000517924 C9orf153Q5TBE3 101 aa13.91□□□□□ -0.18
LAPTM4B-202ENST00000517924 FP248Q71RG6 208 aaPredicted RBP13.91□□□□□ -0.18
LAPTM4B-202ENST00000517924 C6orf99Q4VX62 202 aa13.89□□□□□ -0.19
LAPTM4B-202ENST00000517924 LINC00518Q8N0U6 118 aa13.89□□□□□ -0.19
LAPTM4B-202ENST00000517924 Q8N377 158 aa13.89□□□□□ -0.19
LAPTM4B-202ENST00000517924 ELOF1P60002 83 aaKnown RBP13.87□□□□□ -0.19
LAPTM4B-202ENST00000517924 COX7BP24311 80 aa13.86□□□□□ -0.19
LAPTM4B-202ENST00000517924 KRTAP13-3Q3SY46 172 aa13.86□□□□□ -0.19
LAPTM4B-202ENST00000517924 HIST3H2BBQ8N257 126 aa13.86□□□□□ -0.19
LAPTM4B-202ENST00000517924 DHRS4-AS1Q9P1J3 65 aa13.86□□□□□ -0.19
LAPTM4B-202ENST00000517924 C5orf52A6NGY3 159 aa13.85□□□□□ -0.19
LAPTM4B-202ENST00000517924 MUSTN1Q8IVN3 82 aa13.85□□□□□ -0.19
LAPTM4B-202ENST00000517924 RPS29P62273 56 aaKnown RBP13.84□□□□□ -0.19
LAPTM4B-202ENST00000517924 HIST1H2BLQ99880 126 aa13.84□□□□□ -0.19
LAPTM4B-202ENST00000517924 IFITM1P13164 125 aa13.83□□□□□ -0.2
LAPTM4B-202ENST00000517924 SPRR1BP22528 89 aa13.83□□□□□ -0.2
LAPTM4B-202ENST00000517924 A6NDN8 102 aa13.79□□□□□ -0.2
LAPTM4B-202ENST00000517924 MUC17Q685J3 4493 aa13.78□□□□□ -0.2
LAPTM4B-202ENST00000517924 SLC25A20O43772 301 aa13.78□□□□□ -0.2
LAPTM4B-202ENST00000517924 Q6ZVH6 145 aa13.78□□□□□ -0.2
LAPTM4B-202ENST00000517924 COPS9Q8WXC6 57 aa13.78□□□□□ -0.2
LAPTM4B-202ENST00000517924 S100A2P29034 98 aa13.77□□□□□ -0.21
LAPTM4B-202ENST00000517924 AKR1D1P51857 326 aa13.77□□□□□ -0.21
LAPTM4B-202ENST00000517924 DEFB105AQ8NG35 78 aa13.77□□□□□ -0.21
LAPTM4B-202ENST00000517924 S100A1P23297 94 aa13.76□□□□□ -0.21
LAPTM4B-202ENST00000517924 A0A0U1RQV1 116 aa13.75□□□□□ -0.21
LAPTM4B-202ENST00000517924 SNRPEP62304 92 aaKnown RBP13.75□□□□□ -0.21
LAPTM4B-202ENST00000517924 HRCT1Q6UXD1 115 aa13.75□□□□□ -0.21
LAPTM4B-202ENST00000517924 TRBV7-6A0A0J9YX20 115 aa13.74□□□□□ -0.21
LAPTM4B-202ENST00000517924 TAL2Q16559 108 aa13.74□□□□□ -0.21
LAPTM4B-202ENST00000517924 Q1RN00 199 aa13.74□□□□□ -0.21
LAPTM4B-202ENST00000517924 LAMTOR3Q9UHA4 124 aa13.74□□□□□ -0.21
LAPTM4B-202ENST00000517924 SLC25A34Q6PIV7 304 aa13.73□□□□□ -0.21
LAPTM4B-202ENST00000517924 A0A1B0GWB2 263 aa13.72□□□□□ -0.21
LAPTM4B-202ENST00000517924 SMIM11BQ8TCY0 68 aa13.71□□□□□ -0.21
LAPTM4B-202ENST00000517924 LINC01547P58512 204 aaPredicted RBP13.7□□□□□ -0.22
LAPTM4B-202ENST00000517924 TEX49A0A1B0GTD5 131 aa13.68□□□□□ -0.22
LAPTM4B-202ENST00000517924 SMIM29Q86T20 159 aa13.68□□□□□ -0.22
LAPTM4B-202ENST00000517924 TRAV13-2A0A0B4J235 113 aa13.67□□□□□ -0.22
LAPTM4B-202ENST00000517924 S100A6P06703 90 aa13.67□□□□□ -0.22
LAPTM4B-202ENST00000517924 HSBP1L1C9JCN9 74 aa13.66□□□□□ -0.22
LAPTM4B-202ENST00000517924 ASB16-AS1Q495Z4 193 aa13.66□□□□□ -0.22
LAPTM4B-202ENST00000517924 FAT4Q6V0I7 4981 aa13.65□□□□□ -0.22
LAPTM4B-202ENST00000517924 LCE2AQ5TA79 106 aaPredicted RBP13.65□□□□□ -0.22
LAPTM4B-202ENST00000517924 IGLV5-48A0A075B6I7 105 aa13.64□□□□□ -0.23
LAPTM4B-202ENST00000517924 A0A0G2JQZ4 141 aa13.64□□□□□ -0.23
LAPTM4B-202ENST00000517924 KRTAP4-1Q9BYQ7 146 aa13.64□□□□□ -0.23
LAPTM4B-202ENST00000517924 A4D1N5 150 aa13.62□□□□□ -0.23
LAPTM4B-202ENST00000517924 LIMD2Q9BT23 127 aa13.61□□□□□ -0.23
LAPTM4B-202ENST00000517924 SCGB1D1O95968 90 aa13.6□□□□□ -0.23
LAPTM4B-202ENST00000517924 PRO1933Q9H354 126 aa13.6□□□□□ -0.23
LAPTM4B-202ENST00000517924 H7C2G1 150 aa13.59□□□□□ -0.23
LAPTM4B-202ENST00000517924 XP32Q5T750 250 aa13.59□□□□□ -0.23
LAPTM4B-202ENST00000517924 SEC61BP60468 96 aaKnown RBP13.56□□□□□ -0.24
LAPTM4B-202ENST00000517924 CD164Q04900 197 aa13.56□□□□□ -0.24
LAPTM4B-202ENST00000517924 C12orf57Q99622 126 aa13.56□□□□□ -0.24
LAPTM4B-202ENST00000517924 NHP2Q9NX24 153 aaKnown RBP13.54□□□□□ -0.24
LAPTM4B-202ENST00000517924 LINC00575Q6W349 94 aa13.53□□□□□ -0.24
LAPTM4B-202ENST00000517924 COX8AP10176 69 aa13.51□□□□□ -0.25
LAPTM4B-202ENST00000517924 C9orf92A6NGG3 77 aa13.5□□□□□ -0.25
LAPTM4B-202ENST00000517924 VAMP3Q15836 100 aa13.5□□□□□ -0.25
LAPTM4B-202ENST00000517924 HIST1H4GQ99525 98 aa13.5□□□□□ -0.25
LAPTM4B-202ENST00000517924 Q6ZQY7 126 aa13.48□□□□□ -0.25
LAPTM4B-202ENST00000517924 hADV29S1A0JD25 119 aa13.46□□□□□ -0.25
LAPTM4B-202ENST00000517924 Q5XG85 94 aa13.46□□□□□ -0.25
LAPTM4B-202ENST00000517924 C1orf195Q5TG92 126 aa13.45□□□□□ -0.26
LAPTM4B-202ENST00000517924 C14orf144Q96I85 54 aa13.45□□□□□ -0.26
LAPTM4B-202ENST00000517924 DLEU1O43261 78 aa13.43□□□□□ -0.26
LAPTM4B-202ENST00000517924 PAM16Q9Y3D7 125 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms