RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
HMGB1P19-201ENST00000517578 LELP1Q5T871 98 aa2.92□□□□□ -1.94
HMGB1P19-201ENST00000517578 CLPSL2Q6UWE3 100 aa2.92□□□□□ -1.94
HMGB1P19-201ENST00000517578 A8MUU9 505 aa2.91□□□□□ -1.94
HMGB1P19-201ENST00000517578 TLX1NBP0CAT3 122 aa2.91□□□□□ -1.94
HMGB1P19-201ENST00000517578 RPL37AP61513 92 aaKnown RBP2.91□□□□□ -1.94
HMGB1P19-201ENST00000517578 LY6EQ16553 131 aa2.91□□□□□ -1.94
HMGB1P19-201ENST00000517578 BRD3OSQ6XYD6 125 aa2.91□□□□□ -1.94
HMGB1P19-201ENST00000517578 KRTAP4-16G5E9R7 235 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 DEFB113Q30KQ7 82 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 KRTAP24-1Q3LI83 254 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 Q5W150 140 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 SPINT4Q6UDR6 99 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 CSNK1G2-AS1Q8NCQ2 148 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 C4orf3Q8WVX3 66 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 MRPL34Q9BQ48 92 aaKnown RBP2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 C8orf17Q9NRJ1 99 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 APC2O95996 2303 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 SRCAPQ6ZRS2 3230 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 WNK1Q9H4A3 2382 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 P0C880 135 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 DNAH10OSP0CZ25 163 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 TMEM105Q8N8V8 129 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 CCL19Q99731 98 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 ANAPC11Q9NYG5 84 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 TPRP12270 2363 aaKnown RBP2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 PKDREJQ9NTG1 2253 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 GOLGB1Q14789 3259 aaKnown RBP2.88□□□□□ -1.95
HMGB1P19-201ENST00000517578 LY6G6CO95867 125 aa2.88□□□□□ -1.95
HMGB1P19-201ENST00000517578 SPRR1BP22528 89 aa2.88□□□□□ -1.95
HMGB1P19-201ENST00000517578 CASC10Q5T4H9 136 aa2.88□□□□□ -1.95
HMGB1P19-201ENST00000517578 KRTAP26-1Q6PEX3 210 aa2.88□□□□□ -1.95
HMGB1P19-201ENST00000517578 C15orf56Q8N910 161 aa2.88□□□□□ -1.95
HMGB1P19-201ENST00000517578 SPTBN2O15020 2390 aa2.88□□□□□ -1.95
HMGB1P19-201ENST00000517578 FAM168BA1KXE4 195 aa2.87□□□□□ -1.95
HMGB1P19-201ENST00000517578 DEFB130BP0DP73 79 aa2.87□□□□□ -1.95
HMGB1P19-201ENST00000517578 DEFB130AP0DP74 79 aa2.87□□□□□ -1.95
HMGB1P19-201ENST00000517578 DEFB132Q7Z7B7 95 aa2.87□□□□□ -1.95
HMGB1P19-201ENST00000517578 CAMK2N1Q7Z7J9 78 aa2.87□□□□□ -1.95
HMGB1P19-201ENST00000517578 CEP350Q5VT06 3117 aa2.87□□□□□ -1.95
HMGB1P19-201ENST00000517578 DNAH12Q6ZR08 3092 aa2.87□□□□□ -1.95
HMGB1P19-201ENST00000517578 CENPFP49454 3210 aa2.86□□□□□ -1.95
HMGB1P19-201ENST00000517578 A0A1W2PNU3 283 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P19-201ENST00000517578 MAP1BP46821 2468 aaKnown RBP2.86□□□□□ -1.95
HMGB1P19-201ENST00000517578 ROS1P08922 2347 aa2.85□□□□□ -1.95
HMGB1P19-201ENST00000517578 A0A1B0GVX0 72 aa2.85□□□□□ -1.95
HMGB1P19-201ENST00000517578 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
HMGB1P19-201ENST00000517578 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
HMGB1P19-201ENST00000517578 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
HMGB1P19-201ENST00000517578 LINC00304Q8N9R0 145 aa2.85□□□□□ -1.95
HMGB1P19-201ENST00000517578 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
HMGB1P19-201ENST00000517578 PCNX1Q96RV3 2341 aa2.84□□□□□ -1.95
HMGB1P19-201ENST00000517578 KRTAP11-1Q8IUC1 163 aa2.84□□□□□ -1.95
HMGB1P19-201ENST00000517578 RP1L1Q8IWN7 2480 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P19-201ENST00000517578 CUL9Q8IWT3 2517 aa2.83□□□□□ -1.96
HMGB1P19-201ENST00000517578 H3BNG1 76 aa2.83□□□□□ -1.96
HMGB1P19-201ENST00000517578 GIG44P09565 113 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P19-201ENST00000517578 SSBP3-AS1Q7Z2R9 100 aa2.83□□□□□ -1.96
HMGB1P19-201ENST00000517578 KMT2BQ9UMN6 2715 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P19-201ENST00000517578 COL6A6A6NMZ7 2263 aa2.82□□□□□ -1.96
HMGB1P19-201ENST00000517578 NOTCH3Q9UM47 2321 aa2.82□□□□□ -1.96
HMGB1P19-201ENST00000517578 PANO1I0J062 215 aa2.82□□□□□ -1.96
HMGB1P19-201ENST00000517578 DEFB136Q30KP8 78 aa2.82□□□□□ -1.96
HMGB1P19-201ENST00000517578 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
HMGB1P19-201ENST00000517578 A0A087WTM6 91 aa2.81□□□□□ -1.96
HMGB1P19-201ENST00000517578 KRTAP10-12P60413 245 aa2.81□□□□□ -1.96
HMGB1P19-201ENST00000517578 COX6B2Q6YFQ2 88 aa2.81□□□□□ -1.96
HMGB1P19-201ENST00000517578 MGAQ8IWI9 3026 aa2.8□□□□□ -1.96
HMGB1P19-201ENST00000517578 CNOT1A5YKK6 2376 aaKnown RBP2.8□□□□□ -1.96
HMGB1P19-201ENST00000517578 AKAP6Q13023 2319 aa2.8□□□□□ -1.96
HMGB1P19-201ENST00000517578 A0A096LPF7 62 aa2.8□□□□□ -1.96
HMGB1P19-201ENST00000517578 SPART-AS1P0CW21 52 aa2.8□□□□□ -1.96
HMGB1P19-201ENST00000517578 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
HMGB1P19-201ENST00000517578 COL6A3P12111 3177 aa2.79□□□□□ -1.96
HMGB1P19-201ENST00000517578 TNRC18O15417 2968 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P19-201ENST00000517578 TRIOBPQ9H2D6 2365 aa2.79□□□□□ -1.96
HMGB1P19-201ENST00000517578 A0A1B0GU33 70 aa2.79□□□□□ -1.96
HMGB1P19-201ENST00000517578 CRIPTQ9P021 101 aa2.78□□□□□ -1.96
HMGB1P19-201ENST00000517578 GPR179Q6PRD1 2367 aa2.78□□□□□ -1.97
HMGB1P19-201ENST00000517578 KRTAP13-3Q3SY46 172 aa2.77□□□□□ -1.97
HMGB1P19-201ENST00000517578 C10orf99Q6UWK7 81 aa2.77□□□□□ -1.97
HMGB1P19-201ENST00000517578 Q96NJ1 140 aa2.77□□□□□ -1.97
HMGB1P19-201ENST00000517578 PTPRZ1P23471 2315 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P19-201ENST00000517578 ACACAQ13085 2346 aa2.77□□□□□ -1.97
HMGB1P19-201ENST00000517578 EP300Q09472 2414 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P19-201ENST00000517578 ZZEF1O43149 2961 aa2.76□□□□□ -1.97
HMGB1P19-201ENST00000517578 UTRNP46939 3433 aa2.75□□□□□ -1.97
HMGB1P19-201ENST00000517578 NBEAQ8NFP9 2946 aa2.75□□□□□ -1.97
HMGB1P19-201ENST00000517578 C14orf177Q52M58 125 aa2.75□□□□□ -1.97
HMGB1P19-201ENST00000517578 LINC01556Q5JQF7 62 aa2.75□□□□□ -1.97
HMGB1P19-201ENST00000517578 CACNA1HO95180 2353 aa2.75□□□□□ -1.97
HMGB1P19-201ENST00000517578 H1FX-AS1Q4G0G2 97 aa2.74□□□□□ -1.97
HMGB1P19-201ENST00000517578 Q6ZSA8 131 aa2.74□□□□□ -1.97
HMGB1P19-201ENST00000517578 PSORS1C2Q9UIG4 136 aa2.74□□□□□ -1.97
HMGB1P19-201ENST00000517578 SPTA1P02549 2419 aa2.73□□□□□ -1.97
HMGB1P19-201ENST00000517578 C2CD3Q4AC94 2353 aa2.73□□□□□ -1.97
HMGB1P19-201ENST00000517578 RANBP2P49792 3224 aaKnown RBP2.73□□□□□ -1.97
HMGB1P19-201ENST00000517578 A0A0G2JQZ4 141 aa2.73□□□□□ -1.97
HMGB1P19-201ENST00000517578 NBDYA0A0U1RRE5 68 aa2.73□□□□□ -1.97
HMGB1P19-201ENST00000517578 CIRBP-AS1Q8TBR5 109 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms