RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 IAPPP10997 89 aa-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 ACYP2P14621 99 aa-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 RPL35P42766 123 aaKnown RBP-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 POLR2KP53803 58 aaKnown RBP-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 NPC2P61916 151 aa-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 SCGB2B2Q4G0G5 96 aa-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 ZNF818PQ6ZRF7 136 aa-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 SREK1IP1Q8N9Q2 155 aaPredicted RBP-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 ARMC1Q9NVT9 282 aa-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 PRNDQ9UKY0 176 aa-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 TRBV7-3A0A075B6L6 115 aa-1.19□□□□□ -2.6
SCARNA1-201ENST00000517138 TRBV6-1A0A0K0K1D8 114 aa-1.19□□□□□ -2.6
SCARNA1-201ENST00000517138 RIIAD1A6NNX1 92 aa-1.19□□□□□ -2.6
SCARNA1-201ENST00000517138 HIGD1CA8MV81 97 aa-1.19□□□□□ -2.6
SCARNA1-201ENST00000517138 G3V2T6 193 aa-1.19□□□□□ -2.6
SCARNA1-201ENST00000517138 AIPO00170 330 aa-1.19□□□□□ -2.6
SCARNA1-201ENST00000517138 PCBD1P61457 104 aa-1.19□□□□□ -2.6
SCARNA1-201ENST00000517138 PSPHP78330 225 aa-1.19□□□□□ -2.6
SCARNA1-201ENST00000517138 SNCBQ16143 134 aa-1.19□□□□□ -2.6
SCARNA1-201ENST00000517138 MIC13Q5XKP0 118 aa-1.19□□□□□ -2.6
SCARNA1-201ENST00000517138 SKA2Q8WVK7 121 aaPredicted RBP-1.19□□□□□ -2.6
SCARNA1-201ENST00000517138 CIB3Q96Q77 187 aaPredicted RBP-1.19□□□□□ -2.6
SCARNA1-201ENST00000517138 PRR15LQ9BU68 103 aa-1.19□□□□□ -2.6
SCARNA1-201ENST00000517138 IGHV1-24A0A0C4DH33 117 aa-1.2□□□□□ -2.6
SCARNA1-201ENST00000517138 M0QY20 66 aa-1.2□□□□□ -2.6
SCARNA1-201ENST00000517138 PGRMC1O00264 195 aaKnown RBP-1.2□□□□□ -2.6
SCARNA1-201ENST00000517138 GNG7O60262 68 aa-1.2□□□□□ -2.6
SCARNA1-201ENST00000517138 SLC25A5P05141 298 aaKnown RBP-1.2□□□□□ -2.6
SCARNA1-201ENST00000517138 SAA1P0DJI8 122 aaPredicted RBP-1.2□□□□□ -2.6
SCARNA1-201ENST00000517138 POLR2HP52434 150 aaKnown RBP-1.2□□□□□ -2.6
SCARNA1-201ENST00000517138 MRPS36P82909 103 aaKnown RBP-1.2□□□□□ -2.6
SCARNA1-201ENST00000517138 SARNPP82979 210 aaKnown RBP-1.2□□□□□ -2.6
SCARNA1-201ENST00000517138 RGS21Q2M5E4 152 aa-1.2□□□□□ -2.6
SCARNA1-201ENST00000517138 CGREF1Q99674 301 aa-1.2□□□□□ -2.6
SCARNA1-201ENST00000517138 BBIP1A8MTZ0 92 aa-1.21□□□□□ -2.6
SCARNA1-201ENST00000517138 H7C1C5 153 aa-1.21□□□□□ -2.6
SCARNA1-201ENST00000517138 E2F6O75461 281 aa-1.21□□□□□ -2.6
SCARNA1-201ENST00000517138 TRACP01848 142 aa-1.21□□□□□ -2.6
SCARNA1-201ENST00000517138 CSN2P05814 226 aa-1.21□□□□□ -2.6
SCARNA1-201ENST00000517138 FGF7P21781 194 aa-1.21□□□□□ -2.6
SCARNA1-201ENST00000517138 CRIP1P50238 77 aa-1.21□□□□□ -2.6
SCARNA1-201ENST00000517138 GNG3P63215 75 aa-1.21□□□□□ -2.6
SCARNA1-201ENST00000517138 Q6AWC8 147 aa-1.21□□□□□ -2.6
SCARNA1-201ENST00000517138 C9orf62Q8N4C0 152 aa-1.21□□□□□ -2.6
SCARNA1-201ENST00000517138 TMEM229BQ8NBD8 167 aa-1.21□□□□□ -2.6
SCARNA1-201ENST00000517138 ARL11Q969Q4 196 aa-1.21□□□□□ -2.6
SCARNA1-201ENST00000517138 BIN3Q9NQY0 253 aa-1.21□□□□□ -2.6
SCARNA1-201ENST00000517138 PNMA8CA0A1B0GUJ8 204 aa-1.22□□□□□ -2.6
SCARNA1-201ENST00000517138 MORN2Q502X0 79 aa-1.22□□□□□ -2.6
SCARNA1-201ENST00000517138 Q6ZUT4 128 aa-1.22□□□□□ -2.6
SCARNA1-201ENST00000517138 DEFB105AQ8NG35 78 aa-1.22□□□□□ -2.6
SCARNA1-201ENST00000517138 MAFIPQ8WZ33 124 aa-1.22□□□□□ -2.6
SCARNA1-201ENST00000517138 AIF1LQ9BQI0 150 aa-1.22□□□□□ -2.6
SCARNA1-201ENST00000517138 KCNQ1DNQ9H478 68 aa-1.22□□□□□ -2.6
SCARNA1-201ENST00000517138 MPC1Q9Y5U8 109 aa-1.22□□□□□ -2.6
SCARNA1-201ENST00000517138 CRYM-AS1A6NIL9 109 aa-1.23□□□□□ -2.61
SCARNA1-201ENST00000517138 F2Z2F3 143 aa-1.23□□□□□ -2.61
SCARNA1-201ENST00000517138 IGKCP01834 107 aa-1.23□□□□□ -2.61
SCARNA1-201ENST00000517138 APOA2P02652 100 aa-1.23□□□□□ -2.61
SCARNA1-201ENST00000517138 IFI6P09912 130 aa-1.23□□□□□ -2.61
SCARNA1-201ENST00000517138 FAM74A4Q5TZK3 123 aa-1.23□□□□□ -2.61
SCARNA1-201ENST00000517138 SLC48A1Q6P1K1 146 aa-1.23□□□□□ -2.61
SCARNA1-201ENST00000517138 Q8IZM0 81 aa-1.23□□□□□ -2.61
SCARNA1-201ENST00000517138 OR8I2Q8N0Y5 310 aa-1.23□□□□□ -2.61
SCARNA1-201ENST00000517138 CEP19Q96LK0 163 aa-1.23□□□□□ -2.61
SCARNA1-201ENST00000517138 PCBD2Q9H0N5 130 aa-1.23□□□□□ -2.61
SCARNA1-201ENST00000517138 ARL2BPQ9Y2Y0 163 aa-1.23□□□□□ -2.61
SCARNA1-201ENST00000517138 ARL2-SNX15V9GYD0 113 aa-1.23□□□□□ -2.61
SCARNA1-201ENST00000517138 UBE2L5PA0A1B0GUS4 154 aa-1.24□□□□□ -2.61
SCARNA1-201ENST00000517138 IFITM5A6NNB3 132 aa-1.24□□□□□ -2.61
SCARNA1-201ENST00000517138 H7BZZ5 65 aa-1.24□□□□□ -2.61
SCARNA1-201ENST00000517138 M0R135 149 aa-1.24□□□□□ -2.61
SCARNA1-201ENST00000517138 SLC25A6P12236 298 aa-1.24□□□□□ -2.61
SCARNA1-201ENST00000517138 GTF2A1P52655 376 aaPredicted RBP-1.24□□□□□ -2.61
SCARNA1-201ENST00000517138 MRPS10P82664 201 aaKnown RBP-1.24□□□□□ -2.61
SCARNA1-201ENST00000517138 AKR1C8PQ5T2L2 129 aa-1.24□□□□□ -2.61
SCARNA1-201ENST00000517138 SSR3Q9UNL2 185 aa-1.24□□□□□ -2.61
SCARNA1-201ENST00000517138 TRAV13-1A0A0B4J241 112 aa-1.25□□□□□ -2.61
SCARNA1-201ENST00000517138 C5orf58C9J3I9 102 aa-1.25□□□□□ -2.61
SCARNA1-201ENST00000517138 TPST1O60507 370 aa-1.25□□□□□ -2.61
SCARNA1-201ENST00000517138 S100A10P60903 97 aa-1.25□□□□□ -2.61
SCARNA1-201ENST00000517138 MUSTN1Q8IVN3 82 aa-1.25□□□□□ -2.61
SCARNA1-201ENST00000517138 MRPL34Q9BQ48 92 aaKnown RBP-1.25□□□□□ -2.61
SCARNA1-201ENST00000517138 BET1LQ9NYM9 111 aa-1.25□□□□□ -2.61
SCARNA1-201ENST00000517138 TEX49A0A1B0GTD5 131 aa-1.26□□□□□ -2.61
SCARNA1-201ENST00000517138 DEGS1O15121 323 aa-1.26□□□□□ -2.61
SCARNA1-201ENST00000517138 MGPP08493 103 aa-1.26□□□□□ -2.61
SCARNA1-201ENST00000517138 IGLC1P0CG04 106 aa-1.26□□□□□ -2.61
SCARNA1-201ENST00000517138 CYP2G1PQ6ZSU1 146 aa-1.26□□□□□ -2.61
SCARNA1-201ENST00000517138 CDC26Q8NHZ8 85 aa-1.26□□□□□ -2.61
SCARNA1-201ENST00000517138 DYDC1Q8WWB3 177 aa-1.26□□□□□ -2.61
SCARNA1-201ENST00000517138 PBDC1Q9BVG4 233 aa-1.26□□□□□ -2.61
SCARNA1-201ENST00000517138 SMIM2Q9BVW6 85 aa-1.26□□□□□ -2.61
SCARNA1-201ENST00000517138 OTORQ9NRC9 128 aa-1.26□□□□□ -2.61
SCARNA1-201ENST00000517138 CDC42SE2Q9NRR3 84 aa-1.26□□□□□ -2.61
SCARNA1-201ENST00000517138 LYRM2Q9NU23 88 aaPredicted RBP-1.26□□□□□ -2.61
SCARNA1-201ENST00000517138 TOMM7Q9P0U1 55 aa-1.26□□□□□ -2.61
SCARNA1-201ENST00000517138 TRAV36DV7A0A075B6V5 113 aa-1.27□□□□□ -2.61
SCARNA1-201ENST00000517138 LOC285095A0A1B0GVY8 99 aa-1.27□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms