RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 TEX43Q6ZNM6 134 aa0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 C11orf52Q96A22 123 aa0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 SEC22CQ9BRL7 303 aa0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 SMIM3Q9BZL3 60 aa0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 ACTR3CQ9C0K3 210 aaPredicted RBP0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 VCX3BQ9H321 246 aa0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 VCX3AQ9NNX9 186 aa0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 BLOC1S6Q9UL45 172 aa0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 TINCRA0A1B0GVN0 87 aa0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 CCDC160A6NGH7 325 aa0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 K7EN84 100 aa0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 PAGE4O60829 102 aa0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 GIPP09681 153 aaPredicted RBP0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 SPINK8P0C7L1 97 aa0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 IFI27P40305 119 aaPredicted RBP0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 H2BFSP57053 126 aa0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 KRTAP19-5Q3LI72 72 aa0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 C5orf47Q569G3 176 aa0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 ADAMTSL4-AS1Q5T5F5 129 aa0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 SLC25A34Q6PIV7 304 aa0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 TOMM5Q8N4H5 51 aa0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 STOML3Q8TAV4 291 aa0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 SCGB1C1Q8TD33 95 aa0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 SMIM12Q96EX1 92 aa0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 SMIM2Q9BVW6 85 aa0.71□□□□□ -2.3
RNU1-48P-201ENST00000516400 TRBV10-2A0A0K0K1G8 114 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 TEX49A0A1B0GTD5 131 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 A0A1B0GWB2 263 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 COLCA2A8K830 154 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 PLA2G10O15496 165 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 ATP5LO75964 103 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 MPC2O95563 127 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 MBP02144 154 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 DDTP30046 118 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 FAUP35544 74 aaKnown RBP0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 CCL20P78556 96 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 JOSD1Q15040 202 aaPredicted RBP0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 CENPWQ5EE01 88 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 FAM104BQ5XKR9 115 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 SOSTDC1Q6X4U4 206 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 PRR15Q8IV56 129 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 VCXQ9H320 206 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 VCX2Q9H322 139 aa0.7□□□□□ -2.3
RNU1-48P-201ENST00000516400 XKRY2A2RUG3 117 aa0.69□□□□□ -2.3
RNU1-48P-201ENST00000516400 LINC00862A6NCI5 91 aa0.69□□□□□ -2.3
RNU1-48P-201ENST00000516400 ZNF73O43830 326 aaPredicted RBP0.69□□□□□ -2.3
RNU1-48P-201ENST00000516400 PPP1R17O96001 155 aa0.69□□□□□ -2.3
RNU1-48P-201ENST00000516400 NPYP01303 97 aa0.69□□□□□ -2.3
RNU1-48P-201ENST00000516400 LINC00313P59037 77 aa0.69□□□□□ -2.3
RNU1-48P-201ENST00000516400 KRTAP6-2Q3LI66 62 aa0.69□□□□□ -2.3
RNU1-48P-201ENST00000516400 LCA10Q71F78 164 aa0.69□□□□□ -2.3
RNU1-48P-201ENST00000516400 BOD1L2Q8IYS8 172 aa0.69□□□□□ -2.3
RNU1-48P-201ENST00000516400 OCC1Q8TAD7 63 aa0.69□□□□□ -2.3
RNU1-48P-201ENST00000516400 ENKURQ8TC29 256 aa0.69□□□□□ -2.3
RNU1-48P-201ENST00000516400 PPP1R1CQ8WVI7 109 aa0.69□□□□□ -2.3
RNU1-48P-201ENST00000516400 MBD3L1Q8WWY6 194 aa0.69□□□□□ -2.3
RNU1-48P-201ENST00000516400 A0A087WXM4 84 aa0.68□□□□□ -2.3
RNU1-48P-201ENST00000516400 MAP1LC3B2A6NCE7 125 aa0.68□□□□□ -2.3
RNU1-48P-201ENST00000516400 NAP1L6A6NFF2 107 aa0.68□□□□□ -2.3
RNU1-48P-201ENST00000516400 LST1O00453 97 aa0.68□□□□□ -2.3
RNU1-48P-201ENST00000516400 RGS5O15539 181 aa0.68□□□□□ -2.3
RNU1-48P-201ENST00000516400 SEC11AP67812 179 aa0.68□□□□□ -2.3
RNU1-48P-201ENST00000516400 KRTAP6-1Q3LI64 71 aa0.68□□□□□ -2.3
RNU1-48P-201ENST00000516400 Q5BKY6 102 aa0.68□□□□□ -2.3
RNU1-48P-201ENST00000516400 CST9LP1Q5W188 147 aa0.68□□□□□ -2.3
RNU1-48P-201ENST00000516400 PLAC4Q8WY50 150 aa0.68□□□□□ -2.3
RNU1-48P-201ENST00000516400 MAP1LC3BQ9GZQ8 125 aa0.68□□□□□ -2.3
RNU1-48P-201ENST00000516400 RPS10P5Q9NQ39 176 aa0.68□□□□□ -2.3
RNU1-48P-201ENST00000516400 PRO0461Q9UI25 63 aa0.68□□□□□ -2.3
RNU1-48P-201ENST00000516400 TRAV23DV6A0A075B6W5 121 aa0.67□□□□□ -2.3
RNU1-48P-201ENST00000516400 A0A1B0GUT8 65 aa0.67□□□□□ -2.3
RNU1-48P-201ENST00000516400 HMSDA8MTL9 139 aa0.67□□□□□ -2.3
RNU1-48P-201ENST00000516400 SMIM13P0DJ93 91 aa0.67□□□□□ -2.3
RNU1-48P-201ENST00000516400 ADCYAP1P18509 176 aa0.67□□□□□ -2.3
RNU1-48P-201ENST00000516400 ELOF1P60002 83 aaKnown RBP0.67□□□□□ -2.3
RNU1-48P-201ENST00000516400 SNRPEP62304 92 aaKnown RBP0.67□□□□□ -2.3
RNU1-48P-201ENST00000516400 SMIM15Q7Z3B0 74 aa0.67□□□□□ -2.3
RNU1-48P-201ENST00000516400 MIR7-3HGQ8N6C7 128 aa0.67□□□□□ -2.3
RNU1-48P-201ENST00000516400 C2orf88Q9BSF0 95 aa0.67□□□□□ -2.3
RNU1-48P-201ENST00000516400 CST9LQ9H4G1 147 aa0.67□□□□□ -2.3
RNU1-48P-201ENST00000516400 DHRS4-AS1Q9P1J3 65 aa0.67□□□□□ -2.3
RNU1-48P-201ENST00000516400 A0A0U1RRA0 63 aa0.66□□□□□ -2.3
RNU1-48P-201ENST00000516400 LOC389332A0A1B0GUA5 103 aa0.66□□□□□ -2.3
RNU1-48P-201ENST00000516400 HIGD1CA8MV81 97 aa0.66□□□□□ -2.3
RNU1-48P-201ENST00000516400 ZNF22P17026 224 aaPredicted RBP0.66□□□□□ -2.3
RNU1-48P-201ENST00000516400 TAL2Q16559 108 aa0.66□□□□□ -2.3
RNU1-48P-201ENST00000516400 CNPY1Q3B7I2 92 aa0.66□□□□□ -2.3
RNU1-48P-201ENST00000516400 LCE1CQ5T751 118 aa0.66□□□□□ -2.3
RNU1-48P-201ENST00000516400 LCE1BQ5T7P3 118 aa0.66□□□□□ -2.3
RNU1-48P-201ENST00000516400 RPL7L1Q6DKI1 246 aaKnown RBP0.66□□□□□ -2.3
RNU1-48P-201ENST00000516400 CSAG1Q6PB30 78 aa0.66□□□□□ -2.3
RNU1-48P-201ENST00000516400 LINC00299Q6ZSB3 139 aa0.66□□□□□ -2.3
RNU1-48P-201ENST00000516400 DEFB105AQ8NG35 78 aa0.66□□□□□ -2.3
RNU1-48P-201ENST00000516400 LINC00472Q9H8W2 130 aa0.66□□□□□ -2.3
RNU1-48P-201ENST00000516400 NDUFC2O95298 119 aa0.65□□□□□ -2.31
RNU1-48P-201ENST00000516400 SCGB1D1O95968 90 aa0.65□□□□□ -2.31
RNU1-48P-201ENST00000516400 IGLC3P0DOY3 106 aa0.65□□□□□ -2.31
RNU1-48P-201ENST00000516400 GNG4P50150 75 aa0.65□□□□□ -2.31
RNU1-48P-201ENST00000516400 LINC00158P58513 81 aa0.65□□□□□ -2.31
RNU1-48P-201ENST00000516400 UBE2V1Q13404 147 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms