RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 C9orf129Q5T035 196 aaKnown RBP7.27□□□□□ -1.25
TRIM41-209ENST00000515834 ANKRD17O75179 2603 aaKnown RBP7.26□□□□□ -1.25
TRIM41-209ENST00000515834 C19orf73Q9NVV2 129 aa7.26□□□□□ -1.25
TRIM41-209ENST00000515834 CENPFP49454 3210 aa7.26□□□□□ -1.25
TRIM41-209ENST00000515834 COA5Q86WW8 74 aa7.26□□□□□ -1.25
TRIM41-209ENST00000515834 C8orf17Q9NRJ1 99 aa7.26□□□□□ -1.25
TRIM41-209ENST00000515834 IGLV7-43P04211 117 aa7.25□□□□□ -1.25
TRIM41-209ENST00000515834 CSNK1G2-AS1Q8NCQ2 148 aa7.25□□□□□ -1.25
TRIM41-209ENST00000515834 C4orf26Q17RF5 130 aa7.25□□□□□ -1.25
TRIM41-209ENST00000515834 A0A1B0GVX0 72 aa7.23□□□□□ -1.25
TRIM41-209ENST00000515834 PSORS1C2Q9UIG4 136 aa7.23□□□□□ -1.25
TRIM41-209ENST00000515834 SMCPP49901 116 aaPredicted RBP7.23□□□□□ -1.25
TRIM41-209ENST00000515834 KCNQ1DNQ9H478 68 aa7.23□□□□□ -1.25
TRIM41-209ENST00000515834 CEP295Q9C0D2 2601 aa7.22□□□□□ -1.25
TRIM41-209ENST00000515834 PCSK5Q92824 1860 aa7.22□□□□□ -1.25
TRIM41-209ENST00000515834 USP24Q9UPU5 2620 aa7.21□□□□□ -1.25
TRIM41-209ENST00000515834 ZNF575Q86XF7 245 aa7.21□□□□□ -1.25
TRIM41-209ENST00000515834 UQCR11O14957 56 aa7.21□□□□□ -1.26
TRIM41-209ENST00000515834 Q6ZSA8 131 aa7.21□□□□□ -1.26
TRIM41-209ENST00000515834 Q8N1X5 172 aa7.21□□□□□ -1.26
TRIM41-209ENST00000515834 C9orf163Q8N9P6 203 aa7.19□□□□□ -1.26
TRIM41-209ENST00000515834 CASC10Q5T4H9 136 aa7.19□□□□□ -1.26
TRIM41-209ENST00000515834 MIR22HGQ0VDD5 57 aa7.18□□□□□ -1.26
TRIM41-209ENST00000515834 PRR15Q8IV56 129 aa7.18□□□□□ -1.26
TRIM41-209ENST00000515834 IGLV5-48A0A075B6I7 105 aa7.18□□□□□ -1.26
TRIM41-209ENST00000515834 PRO0628Q9UI54 55 aa7.17□□□□□ -1.26
TRIM41-209ENST00000515834 A8MUN3 132 aa7.16□□□□□ -1.26
TRIM41-209ENST00000515834 Q8N377 158 aa7.16□□□□□ -1.26
TRIM41-209ENST00000515834 TNP2Q05952 138 aa7.15□□□□□ -1.26
TRIM41-209ENST00000515834 IGLV7-46A0A075B6I9 117 aa7.14□□□□□ -1.27
TRIM41-209ENST00000515834 PRR34Q9NV39 138 aa7.14□□□□□ -1.27
TRIM41-209ENST00000515834 LITAFQ99732 161 aa7.13□□□□□ -1.27
TRIM41-209ENST00000515834 SPRR4Q96PI1 79 aa7.13□□□□□ -1.27
TRIM41-209ENST00000515834 EP400Q96L91 3159 aa7.12□□□□□ -1.27
TRIM41-209ENST00000515834 LINC00612Q8N6U2 182 aa7.11□□□□□ -1.27
TRIM41-209ENST00000515834 GIG44P09565 113 aaPredicted RBP7.11□□□□□ -1.27
TRIM41-209ENST00000515834 PRO0461Q9UI25 63 aa7.1□□□□□ -1.27
TRIM41-209ENST00000515834 CAMK2N1Q7Z7J9 78 aa7.1□□□□□ -1.27
TRIM41-209ENST00000515834 ERC2-IT1O76042 136 aa7.1□□□□□ -1.27
TRIM41-209ENST00000515834 PRR26Q8N8Z3 221 aa7.1□□□□□ -1.27
TRIM41-209ENST00000515834 TLX1NBP0CAT3 122 aa7.09□□□□□ -1.27
TRIM41-209ENST00000515834 A0A096LNT2 108 aa7.09□□□□□ -1.28
TRIM41-209ENST00000515834 FLNBO75369 2602 aaKnown RBP7.08□□□□□ -1.28
TRIM41-209ENST00000515834 MGAM2Q2M2H8 2515 aa7.08□□□□□ -1.28
TRIM41-209ENST00000515834 FAM104AQ969W3 186 aa7.07□□□□□ -1.28
TRIM41-209ENST00000515834 CDC42SE1Q9NRR8 79 aa7.07□□□□□ -1.28
TRIM41-209ENST00000515834 PLA2G2DQ9UNK4 145 aa7.07□□□□□ -1.28
TRIM41-209ENST00000515834 EIF4EBP3O60516 100 aaPredicted RBP7.06□□□□□ -1.28
TRIM41-209ENST00000515834 CNBPP62633 177 aaKnown RBP7.05□□□□□ -1.28
TRIM41-209ENST00000515834 CYP4F30PQ9H0H9 118 aa7.04□□□□□ -1.28
TRIM41-209ENST00000515834 BPTFQ12830 3046 aa7.02□□□□□ -1.29
TRIM41-209ENST00000515834 KLK9Q2XQG4 91 aa7.02□□□□□ -1.29
TRIM41-209ENST00000515834 KRTAP1-3Q8IUG1 177 aa7.02□□□□□ -1.29
TRIM41-209ENST00000515834 EPG5Q9HCE0 2579 aa7.01□□□□□ -1.29
TRIM41-209ENST00000515834 RPS28P62857 69 aaKnown RBP7.01□□□□□ -1.29
TRIM41-209ENST00000515834 ATRQ13535 2644 aa7.01□□□□□ -1.29
TRIM41-209ENST00000515834 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.99□□□□□ -1.29
TRIM41-209ENST00000515834 LUZP6Q538Z0 58 aa6.99□□□□□ -1.29
TRIM41-209ENST00000515834 KRTAP1-1Q07627 177 aa6.98□□□□□ -1.29
TRIM41-209ENST00000515834 LINC00483Q53H64 154 aa6.97□□□□□ -1.29
TRIM41-209ENST00000515834 A0A1W2PNM2 257 aa6.97□□□□□ -1.29
TRIM41-209ENST00000515834 MAST4O15021 2626 aa6.96□□□□□ -1.3
TRIM41-209ENST00000515834 CR1P17927 2039 aa6.93□□□□□ -1.3
TRIM41-209ENST00000515834 HECTD1Q9ULT8 2610 aa6.92□□□□□ -1.3
TRIM41-209ENST00000515834 CD164Q04900 197 aa6.92□□□□□ -1.3
TRIM41-209ENST00000515834 S4R3F8 94 aa6.92□□□□□ -1.3
TRIM41-209ENST00000515834 GOLGB1Q14789 3259 aaKnown RBP6.91□□□□□ -1.3
TRIM41-209ENST00000515834 Q5VSD8 79 aa6.91□□□□□ -1.3
TRIM41-209ENST00000515834 FLG2Q5D862 2391 aaPredicted RBP6.9□□□□□ -1.3
TRIM41-209ENST00000515834 CSAG1Q6PB30 78 aa6.89□□□□□ -1.31
TRIM41-209ENST00000515834 HRES1P13985 223 aa6.88□□□□□ -1.31
TRIM41-209ENST00000515834 KLKP1Q107X0 134 aa6.87□□□□□ -1.31
TRIM41-209ENST00000515834 A0A1B0GU33 70 aa6.87□□□□□ -1.31
TRIM41-209ENST00000515834 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
TRIM41-209ENST00000515834 Q1T7F1 81 aa6.85□□□□□ -1.31
TRIM41-209ENST00000515834 H7BZZ5 65 aa6.84□□□□□ -1.31
TRIM41-209ENST00000515834 ZCCHC13Q8WW36 166 aaKnown RBP6.83□□□□□ -1.32
TRIM41-209ENST00000515834 FAM229BQ4G0N7 80 aa6.83□□□□□ -1.32
TRIM41-209ENST00000515834 SPANXA2-OT1Q8N9U9 137 aa6.83□□□□□ -1.32
TRIM41-209ENST00000515834 R4GN34 69 aa6.82□□□□□ -1.32
TRIM41-209ENST00000515834 PLAC8Q9NZF1 115 aa6.81□□□□□ -1.32
TRIM41-209ENST00000515834 PRRC2CQ9Y520 2896 aaKnown RBP6.8□□□□□ -1.32
TRIM41-209ENST00000515834 LCA10Q71F78 164 aa6.8□□□□□ -1.32
TRIM41-209ENST00000515834 KTN1-AS1Q86SY8 53 aa6.79□□□□□ -1.32
TRIM41-209ENST00000515834 CEP350Q5VT06 3117 aa6.78□□□□□ -1.32
TRIM41-209ENST00000515834 LCE6AA0A183 80 aa6.76□□□□□ -1.33
TRIM41-209ENST00000515834 Q8N9P0 234 aaPredicted RBP6.76□□□□□ -1.33
TRIM41-209ENST00000515834 SPINK7P58062 85 aa6.75□□□□□ -1.33
TRIM41-209ENST00000515834 PLAC4Q8WY50 150 aa6.73□□□□□ -1.33
TRIM41-209ENST00000515834 KRTAP10-1P60331 282 aa6.73□□□□□ -1.33
TRIM41-209ENST00000515834 DMAC1Q96GE9 116 aa6.73□□□□□ -1.33
TRIM41-209ENST00000515834 STAB1Q9NY15 2570 aa6.72□□□□□ -1.33
TRIM41-209ENST00000515834 KRTAP10-2P60368 255 aa6.71□□□□□ -1.34
TRIM41-209ENST00000515834 WIPF1O43516 503 aa6.7□□□□□ -1.34
TRIM41-209ENST00000515834 OCR1Q9BZK8 76 aa6.69□□□□□ -1.34
TRIM41-209ENST00000515834 M0QZ58 72 aa6.69□□□□□ -1.34
TRIM41-209ENST00000515834 Q5W150 140 aa6.68□□□□□ -1.34
TRIM41-209ENST00000515834 MMP24-AS1A0A0U1RRL7 71 aa6.68□□□□□ -1.34
TRIM41-209ENST00000515834 ITPR3Q14573 2671 aa6.66□□□□□ -1.34
TRIM41-209ENST00000515834 KRTAP1-5Q9BYS1 174 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms