RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 HIST1H4GQ99525 98 aa7.21□□□□□ -1.26
SNF8-215ENST00000515572 KRTAP4-16G5E9R7 235 aaPredicted RBP7.2□□□□□ -1.26
SNF8-215ENST00000515572 PRLHP81277 87 aa7.2□□□□□ -1.26
SNF8-215ENST00000515572 J3QL48 77 aa7.19□□□□□ -1.26
SNF8-215ENST00000515572 LINC01600Q96MT4 127 aa7.19□□□□□ -1.26
SNF8-215ENST00000515572 TRAV13-2A0A0B4J235 113 aa7.18□□□□□ -1.26
SNF8-215ENST00000515572 ZNF73O43830 326 aaPredicted RBP7.18□□□□□ -1.26
SNF8-215ENST00000515572 C2orf91Q6ZV80 131 aa7.18□□□□□ -1.26
SNF8-215ENST00000515572 A4D1N5 150 aa7.17□□□□□ -1.26
SNF8-215ENST00000515572 A6NDN8 102 aa7.17□□□□□ -1.26
SNF8-215ENST00000515572 SMIM6P0DI80 62 aa7.17□□□□□ -1.26
SNF8-215ENST00000515572 HINT1P49773 126 aaPredicted RBP7.17□□□□□ -1.26
SNF8-215ENST00000515572 TAL2Q16559 108 aa7.17□□□□□ -1.26
SNF8-215ENST00000515572 B5MCH6 92 aa7.16□□□□□ -1.26
SNF8-215ENST00000515572 Q6ZRX8 168 aa7.16□□□□□ -1.26
SNF8-215ENST00000515572 HIGD2AQ9BW72 106 aa7.16□□□□□ -1.26
SNF8-215ENST00000515572 KRTAP1-4P0C5Y4 121 aa7.15□□□□□ -1.26
SNF8-215ENST00000515572 UQCR10Q9UDW1 63 aa7.15□□□□□ -1.26
SNF8-215ENST00000515572 MYCBP2O75592 4640 aa7.13□□□□□ -1.27
SNF8-215ENST00000515572 LOC105371267A0A1B0GV96 52 aa7.13□□□□□ -1.27
SNF8-215ENST00000515572 C6orf99Q4VX62 202 aa7.13□□□□□ -1.27
SNF8-215ENST00000515572 ZNF706Q9Y5V0 76 aaPredicted RBP7.13□□□□□ -1.27
SNF8-215ENST00000515572 TRBV7-6A0A0J9YX20 115 aa7.12□□□□□ -1.27
SNF8-215ENST00000515572 TMEM238LA0A1B0GVL6 79 aa7.12□□□□□ -1.27
SNF8-215ENST00000515572 A6NJY4 79 aa7.12□□□□□ -1.27
SNF8-215ENST00000515572 MT1HL1P0DM35 61 aa7.12□□□□□ -1.27
SNF8-215ENST00000515572 RPL13AP40429 203 aaKnown RBP7.12□□□□□ -1.27
SNF8-215ENST00000515572 CEND1Q8N111 149 aa7.12□□□□□ -1.27
SNF8-215ENST00000515572 SMCR5Q8TEV8 140 aa7.12□□□□□ -1.27
SNF8-215ENST00000515572 COX7BP24311 80 aa7.11□□□□□ -1.27
SNF8-215ENST00000515572 KRTAP10-8P60410 259 aa7.11□□□□□ -1.27
SNF8-215ENST00000515572 HSD52Q0P140 79 aa7.11□□□□□ -1.27
SNF8-215ENST00000515572 FAM229BQ4G0N7 80 aa7.11□□□□□ -1.27
SNF8-215ENST00000515572 Q9BRP9 147 aa7.11□□□□□ -1.27
SNF8-215ENST00000515572 DMBT1Q9UGM3 2413 aaPredicted RBP7.11□□□□□ -1.27
SNF8-215ENST00000515572 CRYGAP11844 174 aa7.1□□□□□ -1.27
SNF8-215ENST00000515572 ELOF1P60002 83 aaKnown RBP7.1□□□□□ -1.27
SNF8-215ENST00000515572 PRR26Q8N8Z3 221 aa7.1□□□□□ -1.27
SNF8-215ENST00000515572 SMIM11BQ8TCY0 68 aa7.1□□□□□ -1.27
SNF8-215ENST00000515572 SPRR4Q96PI1 79 aa7.1□□□□□ -1.27
SNF8-215ENST00000515572 C12orf57Q99622 126 aa7.1□□□□□ -1.27
SNF8-215ENST00000515572 DHRS4-AS1Q9P1J3 65 aa7.1□□□□□ -1.27
SNF8-215ENST00000515572 A0A0B4J2C4 111 aa7.09□□□□□ -1.27
SNF8-215ENST00000515572 A0A1B0GWB2 263 aa7.09□□□□□ -1.27
SNF8-215ENST00000515572 CFC1BP0CG36 223 aa7.09□□□□□ -1.27
SNF8-215ENST00000515572 CFC1P0CG37 223 aa7.09□□□□□ -1.27
SNF8-215ENST00000515572 RAB37Q96AX2 223 aa7.09□□□□□ -1.27
SNF8-215ENST00000515572 FAT3Q8TDW7 4589 aa7.08□□□□□ -1.28
SNF8-215ENST00000515572 LRP1Q07954 4544 aaKnown RBP7.08□□□□□ -1.28
SNF8-215ENST00000515572 VAMP3Q15836 100 aa7.08□□□□□ -1.28
SNF8-215ENST00000515572 ERC2-IT1O76042 136 aa7.07□□□□□ -1.28
SNF8-215ENST00000515572 A0A087X002 238 aa7.06□□□□□ -1.28
SNF8-215ENST00000515572 FXYD2P54710 66 aa7.06□□□□□ -1.28
SNF8-215ENST00000515572 PRO1933Q9H354 126 aa7.06□□□□□ -1.28
SNF8-215ENST00000515572 ANAPC11Q9NYG5 84 aa7.06□□□□□ -1.28
SNF8-215ENST00000515572 LINC00483Q53H64 154 aa7.05□□□□□ -1.28
SNF8-215ENST00000515572 BVES-AS1Q5T3Y7 98 aa7.05□□□□□ -1.28
SNF8-215ENST00000515572 NHP2Q9NX24 153 aaKnown RBP7.05□□□□□ -1.28
SNF8-215ENST00000515572 PRO1854Q9UHT4 67 aa7.05□□□□□ -1.28
SNF8-215ENST00000515572 TSTD3H0UI37 97 aa7.04□□□□□ -1.28
SNF8-215ENST00000515572 GAGE2AQ6NT46 116 aa7.04□□□□□ -1.28
SNF8-215ENST00000515572 TYMSOSQ8TAI1 123 aa7.04□□□□□ -1.28
SNF8-215ENST00000515572 H7C2G1 150 aa7.03□□□□□ -1.28
SNF8-215ENST00000515572 SLC25A20O43772 301 aa7.03□□□□□ -1.28
SNF8-215ENST00000515572 KRTAP13-2Q52LG2 175 aa7.02□□□□□ -1.29
SNF8-215ENST00000515572 Q1RN00 199 aa7.01□□□□□ -1.29
SNF8-215ENST00000515572 LINC00575Q6W349 94 aa7.01□□□□□ -1.29
SNF8-215ENST00000515572 ST20-AS1Q8NBB2 130 aa7.01□□□□□ -1.29
SNF8-215ENST00000515572 M0R143 59 aa7□□□□□ -1.29
SNF8-215ENST00000515572 SPRR1BP22528 89 aa7□□□□□ -1.29
SNF8-215ENST00000515572 hADV29S1A0JD25 119 aa6.99□□□□□ -1.29
SNF8-215ENST00000515572 H0YGX0 51 aa6.99□□□□□ -1.29
SNF8-215ENST00000515572 IGLV5-48A0A075B6I7 105 aa6.98□□□□□ -1.29
SNF8-215ENST00000515572 TEX49A0A1B0GTD5 131 aa6.98□□□□□ -1.29
SNF8-215ENST00000515572 K7ERJ3 54 aa6.98□□□□□ -1.29
SNF8-215ENST00000515572 CTAG1AP78358 180 aa6.98□□□□□ -1.29
SNF8-215ENST00000515572 C3orf22Q8N5N4 141 aa6.98□□□□□ -1.29
SNF8-215ENST00000515572 TNXBP22105 4242 aa6.98□□□□□ -1.29
SNF8-215ENST00000515572 SNCGO76070 127 aa6.97□□□□□ -1.29
SNF8-215ENST00000515572 IGLV9-49A0A0B4J1Y8 123 aa6.96□□□□□ -1.3
SNF8-215ENST00000515572 SSBP3-AS1Q7Z2R9 100 aa6.96□□□□□ -1.3
SNF8-215ENST00000515572 LINC00304Q8N9R0 145 aa6.96□□□□□ -1.3
SNF8-215ENST00000515572 DEFB105AQ8NG35 78 aa6.96□□□□□ -1.3
SNF8-215ENST00000515572 TRIAP1O43715 76 aa6.95□□□□□ -1.3
SNF8-215ENST00000515572 PSMB2P49721 201 aa6.95□□□□□ -1.3
SNF8-215ENST00000515572 MOBPQ13875 183 aa6.95□□□□□ -1.3
SNF8-215ENST00000515572 SPAG11AQ6PDA7 123 aa6.95□□□□□ -1.3
SNF8-215ENST00000515572 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.95□□□□□ -1.3
SNF8-215ENST00000515572 LAMTOR3Q9UHA4 124 aa6.95□□□□□ -1.3
SNF8-215ENST00000515572 TSPAN13O95857 204 aa6.94□□□□□ -1.3
SNF8-215ENST00000515572 COX6CP09669 75 aa6.94□□□□□ -1.3
SNF8-215ENST00000515572 Q6ZQY7 126 aa6.94□□□□□ -1.3
SNF8-215ENST00000515572 A0A1B0GX51 115 aa6.93□□□□□ -1.3
SNF8-215ENST00000515572 LINC01547P58512 204 aaPredicted RBP6.93□□□□□ -1.3
SNF8-215ENST00000515572 C9orf153Q5TBE3 101 aa6.93□□□□□ -1.3
SNF8-215ENST00000515572 Q8NBF4 154 aa6.93□□□□□ -1.3
SNF8-215ENST00000515572 PPDPFLQ8WWR9 84 aa6.93□□□□□ -1.3
SNF8-215ENST00000515572 HERC1Q15751 4861 aa6.92□□□□□ -1.3
SNF8-215ENST00000515572 OCIAD2Q56VL3 154 aa6.92□□□□□ -1.3
SNF8-215ENST00000515572 C4orf48Q5BLP8 95 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms