RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 MT1BP07438 61 aa6.11□□□□□ -1.43
SMAD1-216ENST00000515527 SPRR1BP22528 89 aa6.11□□□□□ -1.43
SMAD1-216ENST00000515527 IFITM2Q01629 132 aa6.11□□□□□ -1.43
SMAD1-216ENST00000515527 MTURNQ8N3F0 131 aa6.11□□□□□ -1.43
SMAD1-216ENST00000515527 H3BRM9 83 aa6.1□□□□□ -1.43
SMAD1-216ENST00000515527 S100PP25815 95 aa6.1□□□□□ -1.43
SMAD1-216ENST00000515527 AKR1D1P51857 326 aa6.1□□□□□ -1.43
SMAD1-216ENST00000515527 PMVKQ15126 192 aa6.1□□□□□ -1.43
SMAD1-216ENST00000515527 IGFL1Q6UW32 110 aa6.1□□□□□ -1.43
SMAD1-216ENST00000515527 PPBPP02775 128 aa6.09□□□□□ -1.43
SMAD1-216ENST00000515527 C12orf57Q99622 126 aa6.09□□□□□ -1.43
SMAD1-216ENST00000515527 TEX46H3BTG2 121 aa6.08□□□□□ -1.44
SMAD1-216ENST00000515527 DDTP30046 118 aa6.08□□□□□ -1.44
SMAD1-216ENST00000515527 RPL23P62829 140 aaKnown RBP6.08□□□□□ -1.44
SMAD1-216ENST00000515527 Q5VV11 94 aa6.08□□□□□ -1.44
SMAD1-216ENST00000515527 S100ZQ8WXG8 99 aa6.08□□□□□ -1.44
SMAD1-216ENST00000515527 A8MUU9 505 aa6.07□□□□□ -1.44
SMAD1-216ENST00000515527 C21orf62-AS1Q17RA5 79 aa6.07□□□□□ -1.44
SMAD1-216ENST00000515527 PRELID3AQ96N28 172 aa6.07□□□□□ -1.44
SMAD1-216ENST00000515527 ORMDL2Q53FV1 153 aa6.06□□□□□ -1.44
SMAD1-216ENST00000515527 ORMDL3Q8N138 153 aa6.06□□□□□ -1.44
SMAD1-216ENST00000515527 IGLV5-39A0A0G2JS06 123 aa6.05□□□□□ -1.44
SMAD1-216ENST00000515527 S100A8P05109 93 aa6.05□□□□□ -1.44
SMAD1-216ENST00000515527 SMIM6P0DI80 62 aa6.05□□□□□ -1.44
SMAD1-216ENST00000515527 NAT8BQ9UHF3 227 aa6.05□□□□□ -1.44
SMAD1-216ENST00000515527 KRTAP16-1A8MUX0 517 aa6.04□□□□□ -1.44
SMAD1-216ENST00000515527 ARPC5O15511 151 aa6.04□□□□□ -1.44
SMAD1-216ENST00000515527 TMEM136Q6ZRR5 245 aa6.04□□□□□ -1.44
SMAD1-216ENST00000515527 MAP1LC3AQ9H492 121 aa6.03□□□□□ -1.44
SMAD1-216ENST00000515527 A0A1B0GW15 77 aa6.02□□□□□ -1.45
SMAD1-216ENST00000515527 LINC00587B1AMM8 73 aa6.02□□□□□ -1.45
SMAD1-216ENST00000515527 SFTA2Q6UW10 78 aa6.02□□□□□ -1.45
SMAD1-216ENST00000515527 Q8N8P6 123 aa6.02□□□□□ -1.45
SMAD1-216ENST00000515527 OSTCQ9NRP0 149 aa6.02□□□□□ -1.45
SMAD1-216ENST00000515527 AHNAK2Q8IVF2 5795 aa6.02□□□□□ -1.45
SMAD1-216ENST00000515527 NOTCH2NLQ7Z3S9 236 aa6.01□□□□□ -1.45
SMAD1-216ENST00000515527 V9GYV3 84 aa6.01□□□□□ -1.45
SMAD1-216ENST00000515527 CEBPGP53567 150 aa6□□□□□ -1.45
SMAD1-216ENST00000515527 FAM74A3Q4VXF1 159 aa6□□□□□ -1.45
SMAD1-216ENST00000515527 TAL2Q16559 108 aa5.99□□□□□ -1.45
SMAD1-216ENST00000515527 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
SMAD1-216ENST00000515527 DEFB105AQ8NG35 78 aa5.99□□□□□ -1.45
SMAD1-216ENST00000515527 SCGB3A1Q96QR1 104 aa5.99□□□□□ -1.45
SMAD1-216ENST00000515527 CST9LQ9H4G1 147 aa5.99□□□□□ -1.45
SMAD1-216ENST00000515527 SMIM13P0DJ93 91 aa5.98□□□□□ -1.45
SMAD1-216ENST00000515527 MRPL54Q6P161 138 aaKnown RBP5.98□□□□□ -1.45
SMAD1-216ENST00000515527 ERASQ7Z444 233 aa5.98□□□□□ -1.45
SMAD1-216ENST00000515527 TOMM6Q96B49 74 aa5.98□□□□□ -1.45
SMAD1-216ENST00000515527 IMUPQ9GZP8 106 aa5.98□□□□□ -1.45
SMAD1-216ENST00000515527 TRAV23DV6A0A075B6W5 121 aa5.97□□□□□ -1.45
SMAD1-216ENST00000515527 G0S2P27469 103 aa5.97□□□□□ -1.45
SMAD1-216ENST00000515527 MIR7-3HGQ8N6C7 128 aa5.97□□□□□ -1.45
SMAD1-216ENST00000515527 HMCN1Q96RW7 5635 aa5.96□□□□□ -1.45
SMAD1-216ENST00000515527 ZNF73O43830 326 aaPredicted RBP5.96□□□□□ -1.46
SMAD1-216ENST00000515527 LINC00614P0C842 121 aa5.96□□□□□ -1.46
SMAD1-216ENST00000515527 S100A7L2Q5SY68 101 aa5.96□□□□□ -1.46
SMAD1-216ENST00000515527 H0Y8G0 127 aa5.95□□□□□ -1.46
SMAD1-216ENST00000515527 K7EMI3 77 aa5.95□□□□□ -1.46
SMAD1-216ENST00000515527 ADCYAP1P18509 176 aa5.95□□□□□ -1.46
SMAD1-216ENST00000515527 HINT1P49773 126 aaPredicted RBP5.95□□□□□ -1.46
SMAD1-216ENST00000515527 IFITM3Q01628 133 aa5.95□□□□□ -1.46
SMAD1-216ENST00000515527 KRTAP5-10Q6L8G5 202 aa5.95□□□□□ -1.46
SMAD1-216ENST00000515527 NDUFA6P56556 154 aa5.94□□□□□ -1.46
SMAD1-216ENST00000515527 MEIG1Q5JSS6 88 aa5.94□□□□□ -1.46
SMAD1-216ENST00000515527 LAMTOR2Q9Y2Q5 125 aa5.94□□□□□ -1.46
SMAD1-216ENST00000515527 TRBV10-2A0A0K0K1G8 114 aa5.93□□□□□ -1.46
SMAD1-216ENST00000515527 TMEM250H0YL14 139 aa5.93□□□□□ -1.46
SMAD1-216ENST00000515527 ZNF22P17026 224 aaPredicted RBP5.92□□□□□ -1.46
SMAD1-216ENST00000515527 DHRS4-AS1Q9P1J3 65 aa5.92□□□□□ -1.46
SMAD1-216ENST00000515527 TEX49A0A1B0GTD5 131 aa5.91□□□□□ -1.46
SMAD1-216ENST00000515527 SPRR5A0A1B0GTR4 108 aa5.91□□□□□ -1.46
SMAD1-216ENST00000515527 SMIM27A0A1W2PRY6 76 aa5.91□□□□□ -1.46
SMAD1-216ENST00000515527 SMIM7Q9BQ49 75 aa5.91□□□□□ -1.46
SMAD1-216ENST00000515527 KRTAP19-8Q3LI54 63 aa5.9□□□□□ -1.46
SMAD1-216ENST00000515527 FA2HQ7L5A8 372 aa5.9□□□□□ -1.46
SMAD1-216ENST00000515527 TCTE3Q8IZS6 198 aa5.9□□□□□ -1.46
SMAD1-216ENST00000515527 A0A1B0GXF2 115 aa5.89□□□□□ -1.47
SMAD1-216ENST00000515527 KANTRA0A1W2PQU2 76 aa5.89□□□□□ -1.47
SMAD1-216ENST00000515527 IGLC3P0DOY3 106 aa5.89□□□□□ -1.47
SMAD1-216ENST00000515527 CLLU1Q5K131 121 aa5.89□□□□□ -1.47
SMAD1-216ENST00000515527 NXT2Q9NPJ8 142 aaKnown RBP5.89□□□□□ -1.47
SMAD1-216ENST00000515527 SPANXB1Q9NS25 103 aaPredicted RBP5.89□□□□□ -1.47
SMAD1-216ENST00000515527 A0A1B0GV90 55 aa5.88□□□□□ -1.47
SMAD1-216ENST00000515527 ZNF345Q14585 488 aa5.87□□□□□ -1.47
SMAD1-216ENST00000515527 KRTAP5-7Q6L8G8 165 aa5.87□□□□□ -1.47
SMAD1-216ENST00000515527 COMMD7Q86VX2 200 aa5.87□□□□□ -1.47
SMAD1-216ENST00000515527 A0A1W2PNM2 257 aa5.85□□□□□ -1.47
SMAD1-216ENST00000515527 TMEM170BQ5T4T1 132 aa5.84□□□□□ -1.47
SMAD1-216ENST00000515527 TSTD3H0UI37 97 aa5.83□□□□□ -1.48
SMAD1-216ENST00000515527 LCE1DQ5T752 114 aa5.83□□□□□ -1.48
SMAD1-216ENST00000515527 C14orf144Q96I85 54 aa5.83□□□□□ -1.48
SMAD1-216ENST00000515527 FAM218AQ96MZ4 157 aa5.83□□□□□ -1.48
SMAD1-216ENST00000515527 SMLR1H3BR10 107 aa5.82□□□□□ -1.48
SMAD1-216ENST00000515527 BLOC1S1P78537 153 aa5.82□□□□□ -1.48
SMAD1-216ENST00000515527 MAP1LC3CQ9BXW4 147 aa5.82□□□□□ -1.48
SMAD1-216ENST00000515527 TRBV7-7A0A0K0K1E9 115 aa5.81□□□□□ -1.48
SMAD1-216ENST00000515527 LST1O00453 97 aa5.81□□□□□ -1.48
SMAD1-216ENST00000515527 DSCR10P59022 87 aa5.81□□□□□ -1.48
SMAD1-216ENST00000515527 DLEU1O43261 78 aa5.8□□□□□ -1.48
SMAD1-216ENST00000515527 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms