RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 IGLV6-57P01721 117 aa6.66□□□□□ -1.34
VCAN-212ENST00000515397 ANKRD39Q53RE8 183 aa6.66□□□□□ -1.34
VCAN-212ENST00000515397 GAGE2AQ6NT46 116 aa6.66□□□□□ -1.34
VCAN-212ENST00000515397 Q9BRP9 147 aa6.66□□□□□ -1.34
VCAN-212ENST00000515397 NDUFC2O95298 119 aa6.65□□□□□ -1.34
VCAN-212ENST00000515397 S100A12P80511 92 aa6.65□□□□□ -1.34
VCAN-212ENST00000515397 TRAV23DV6A0A075B6W5 121 aa6.64□□□□□ -1.35
VCAN-212ENST00000515397 OR13C6PQ8NH95 151 aa6.64□□□□□ -1.35
VCAN-212ENST00000515397 PCP2Q8IVA1 136 aa6.63□□□□□ -1.35
VCAN-212ENST00000515397 ZNF706Q9Y5V0 76 aaPredicted RBP6.63□□□□□ -1.35
VCAN-212ENST00000515397 C20orf202A1L168 122 aa6.62□□□□□ -1.35
VCAN-212ENST00000515397 ZNF73O43830 326 aaPredicted RBP6.62□□□□□ -1.35
VCAN-212ENST00000515397 TIMM17BO60830 172 aa6.62□□□□□ -1.35
VCAN-212ENST00000515397 Q6ZRX8 168 aa6.62□□□□□ -1.35
VCAN-212ENST00000515397 ST20-AS1Q8NBB2 130 aa6.62□□□□□ -1.35
VCAN-212ENST00000515397 Q8NBF4 154 aa6.62□□□□□ -1.35
VCAN-212ENST00000515397 IGLV9-49A0A0B4J1Y8 123 aa6.61□□□□□ -1.35
VCAN-212ENST00000515397 S100A1P23297 94 aa6.61□□□□□ -1.35
VCAN-212ENST00000515397 SCGB1D4Q6XE38 83 aa6.61□□□□□ -1.35
VCAN-212ENST00000515397 HIST3H2BBQ8N257 126 aa6.61□□□□□ -1.35
VCAN-212ENST00000515397 SPANXCQ9NY87 97 aa6.61□□□□□ -1.35
VCAN-212ENST00000515397 HIST1H2BLQ99880 126 aa6.6□□□□□ -1.35
VCAN-212ENST00000515397 S100A2P29034 98 aa6.59□□□□□ -1.35
VCAN-212ENST00000515397 MOBPQ13875 183 aa6.59□□□□□ -1.35
VCAN-212ENST00000515397 LINC00483Q53H64 154 aa6.59□□□□□ -1.35
VCAN-212ENST00000515397 C4orf48Q5BLP8 95 aa6.58□□□□□ -1.36
VCAN-212ENST00000515397 MUSTN1Q8IVN3 82 aa6.58□□□□□ -1.36
VCAN-212ENST00000515397 JOSD1Q15040 202 aaPredicted RBP6.57□□□□□ -1.36
VCAN-212ENST00000515397 SPANXDQ9BXN6 97 aa6.57□□□□□ -1.36
VCAN-212ENST00000515397 IGLV7-46A0A075B6I9 117 aa6.56□□□□□ -1.36
VCAN-212ENST00000515397 S100A6P06703 90 aa6.56□□□□□ -1.36
VCAN-212ENST00000515397 HINT1P49773 126 aaPredicted RBP6.56□□□□□ -1.36
VCAN-212ENST00000515397 SNRPEP62304 92 aaKnown RBP6.56□□□□□ -1.36
VCAN-212ENST00000515397 C6orf99Q4VX62 202 aa6.55□□□□□ -1.36
VCAN-212ENST00000515397 LINC00518Q8N0U6 118 aa6.55□□□□□ -1.36
VCAN-212ENST00000515397 MUC2Q02817 5179 aa6.54□□□□□ -1.36
VCAN-212ENST00000515397 A6NDN8 102 aa6.54□□□□□ -1.36
VCAN-212ENST00000515397 COX7BP24311 80 aa6.54□□□□□ -1.36
VCAN-212ENST00000515397 C9orf153Q5TBE3 101 aa6.54□□□□□ -1.36
VCAN-212ENST00000515397 SPAG11AQ6PDA7 123 aa6.54□□□□□ -1.36
VCAN-212ENST00000515397 DEFB105AQ8NG35 78 aa6.53□□□□□ -1.36
VCAN-212ENST00000515397 SCGB1D1O95968 90 aa6.52□□□□□ -1.37
VCAN-212ENST00000515397 IFITM1P13164 125 aa6.52□□□□□ -1.37
VCAN-212ENST00000515397 SSBP3-AS1Q7Z2R9 100 aa6.52□□□□□ -1.37
VCAN-212ENST00000515397 ELOF1P60002 83 aaKnown RBP6.51□□□□□ -1.37
VCAN-212ENST00000515397 CDIP1Q9H305 208 aa6.51□□□□□ -1.37
VCAN-212ENST00000515397 DHRS4-AS1Q9P1J3 65 aa6.51□□□□□ -1.37
VCAN-212ENST00000515397 CBY1Q9Y3M2 126 aa6.51□□□□□ -1.37
VCAN-212ENST00000515397 HSBP1L1C9JCN9 74 aa6.5□□□□□ -1.37
VCAN-212ENST00000515397 SPINK1P00995 79 aa6.5□□□□□ -1.37
VCAN-212ENST00000515397 HRCT1Q6UXD1 115 aa6.5□□□□□ -1.37
VCAN-212ENST00000515397 C5orf52A6NGY3 159 aa6.49□□□□□ -1.37
VCAN-212ENST00000515397 AKR1D1P51857 326 aa6.49□□□□□ -1.37
VCAN-212ENST00000515397 TAL2Q16559 108 aa6.49□□□□□ -1.37
VCAN-212ENST00000515397 Q6ZVH6 145 aa6.49□□□□□ -1.37
VCAN-212ENST00000515397 COPS9Q8WXC6 57 aa6.49□□□□□ -1.37
VCAN-212ENST00000515397 CTAG1AP78358 180 aa6.48□□□□□ -1.37
VCAN-212ENST00000515397 Q1RN00 199 aa6.48□□□□□ -1.37
VCAN-212ENST00000515397 SMIM11BQ8TCY0 68 aa6.48□□□□□ -1.37
VCAN-212ENST00000515397 SPRR1BP22528 89 aa6.47□□□□□ -1.37
VCAN-212ENST00000515397 TPRXLQ17RH7 258 aa6.47□□□□□ -1.37
VCAN-212ENST00000515397 Q8N377 158 aa6.47□□□□□ -1.37
VCAN-212ENST00000515397 TRAV13-2A0A0B4J235 113 aa6.46□□□□□ -1.38
VCAN-212ENST00000515397 A0A0G2JQZ4 141 aa6.46□□□□□ -1.38
VCAN-212ENST00000515397 A4D1N5 150 aa6.46□□□□□ -1.38
VCAN-212ENST00000515397 C12orf57Q99622 126 aa6.46□□□□□ -1.38
VCAN-212ENST00000515397 LAMTOR3Q9UHA4 124 aa6.45□□□□□ -1.38
VCAN-212ENST00000515397 TRBV7-6A0A0J9YX20 115 aa6.44□□□□□ -1.38
VCAN-212ENST00000515397 A0A1B0GWB2 263 aa6.44□□□□□ -1.38
VCAN-212ENST00000515397 LINC01547P58512 204 aaPredicted RBP6.44□□□□□ -1.38
VCAN-212ENST00000515397 KRTAP13-3Q3SY46 172 aa6.44□□□□□ -1.38
VCAN-212ENST00000515397 FP248Q71RG6 208 aaPredicted RBP6.44□□□□□ -1.38
VCAN-212ENST00000515397 SMIM29Q86T20 159 aa6.44□□□□□ -1.38
VCAN-212ENST00000515397 C14orf144Q96I85 54 aa6.44□□□□□ -1.38
VCAN-212ENST00000515397 MUC17Q685J3 4493 aa6.43□□□□□ -1.38
VCAN-212ENST00000515397 TEX49A0A1B0GTD5 131 aa6.43□□□□□ -1.38
VCAN-212ENST00000515397 HIST1H4GQ99525 98 aa6.43□□□□□ -1.38
VCAN-212ENST00000515397 KRTAP9-2Q9BYQ4 174 aa6.43□□□□□ -1.38
VCAN-212ENST00000515397 H7C2G1 150 aa6.42□□□□□ -1.38
VCAN-212ENST00000515397 SLC25A20O43772 301 aa6.42□□□□□ -1.38
VCAN-212ENST00000515397 COX8AP10176 69 aa6.42□□□□□ -1.38
VCAN-212ENST00000515397 SLC25A34Q6PIV7 304 aa6.42□□□□□ -1.38
VCAN-212ENST00000515397 PAM16Q9Y3D7 125 aa6.42□□□□□ -1.38
VCAN-212ENST00000515397 RPS29P62273 56 aaKnown RBP6.4□□□□□ -1.38
VCAN-212ENST00000515397 SPATA45Q537H7 98 aa6.4□□□□□ -1.38
VCAN-212ENST00000515397 IGLV5-48A0A075B6I7 105 aa6.38□□□□□ -1.39
VCAN-212ENST00000515397 VAMP3Q15836 100 aa6.38□□□□□ -1.39
VCAN-212ENST00000515397 LINC00575Q6W349 94 aa6.38□□□□□ -1.39
VCAN-212ENST00000515397 PRO1933Q9H354 126 aa6.38□□□□□ -1.39
VCAN-212ENST00000515397 DLEU1O43261 78 aa6.36□□□□□ -1.39
VCAN-212ENST00000515397 CFC1BP0CG36 223 aa6.36□□□□□ -1.39
VCAN-212ENST00000515397 CFC1P0CG37 223 aa6.36□□□□□ -1.39
VCAN-212ENST00000515397 Q6ZQY7 126 aa6.36□□□□□ -1.39
VCAN-212ENST00000515397 C2orf91Q6ZV80 131 aa6.36□□□□□ -1.39
VCAN-212ENST00000515397 VAMP8Q9BV40 100 aa6.36□□□□□ -1.39
VCAN-212ENST00000515397 NHP2Q9NX24 153 aaKnown RBP6.36□□□□□ -1.39
VCAN-212ENST00000515397 hADV29S1A0JD25 119 aa6.35□□□□□ -1.39
VCAN-212ENST00000515397 C9orf92A6NGG3 77 aa6.35□□□□□ -1.39
VCAN-212ENST00000515397 KRTAP4-1Q9BYQ7 146 aa6.35□□□□□ -1.39
VCAN-212ENST00000515397 LIMD2Q9BT23 127 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms