RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 TIMM17BO60830 172 aa14.13□□□□□ -0.15
SNF8-213ENST00000514929 GAGE2AQ6NT46 116 aa14.13□□□□□ -0.15
SNF8-213ENST00000514929 ERC2-IT1O76042 136 aa14.12□□□□□ -0.15
SNF8-213ENST00000514929 C4orf48Q5BLP8 95 aa14.12□□□□□ -0.15
SNF8-213ENST00000514929 LINC00308Q8TCZ7 52 aa14.12□□□□□ -0.15
SNF8-213ENST00000514929 LITAFQ99732 161 aa14.12□□□□□ -0.15
SNF8-213ENST00000514929 LINC00483Q53H64 154 aa14.11□□□□□ -0.15
SNF8-213ENST00000514929 Q9BRP9 147 aa14.11□□□□□ -0.15
SNF8-213ENST00000514929 TTTY13Q9BZ97 58 aa14.1□□□□□ -0.15
SNF8-213ENST00000514929 SPANXCQ9NY87 97 aa14.1□□□□□ -0.15
SNF8-213ENST00000514929 C20orf202A1L168 122 aa14.09□□□□□ -0.15
SNF8-213ENST00000514929 ZNF73O43830 326 aaPredicted RBP14.09□□□□□ -0.15
SNF8-213ENST00000514929 JOSD1Q15040 202 aaPredicted RBP14.09□□□□□ -0.15
SNF8-213ENST00000514929 CBY1Q9Y3M2 126 aa14.09□□□□□ -0.15
SNF8-213ENST00000514929 Q8NBF4 154 aa14.08□□□□□ -0.16
SNF8-213ENST00000514929 OR13C6PQ8NH95 151 aa14.07□□□□□ -0.16
SNF8-213ENST00000514929 HINT1P49773 126 aaPredicted RBP14.05□□□□□ -0.16
SNF8-213ENST00000514929 IGLV7-46A0A075B6I9 117 aa14.04□□□□□ -0.16
SNF8-213ENST00000514929 IGLV9-49A0A0B4J1Y8 123 aa14.03□□□□□ -0.16
SNF8-213ENST00000514929 MOBPQ13875 183 aa14.02□□□□□ -0.17
SNF8-213ENST00000514929 SCGB1D4Q6XE38 83 aa14.02□□□□□ -0.17
SNF8-213ENST00000514929 ATOH7Q8N100 152 aa14.01□□□□□ -0.17
SNF8-213ENST00000514929 ANKRD39Q53RE8 183 aa14□□□□□ -0.17
SNF8-213ENST00000514929 SPANXDQ9BXN6 97 aa14□□□□□ -0.17
SNF8-213ENST00000514929 SPINK1P00995 79 aa13.99□□□□□ -0.17
SNF8-213ENST00000514929 TPRXLQ17RH7 258 aa13.99□□□□□ -0.17
SNF8-213ENST00000514929 CDIP1Q9H305 208 aa13.99□□□□□ -0.17
SNF8-213ENST00000514929 AKR1D1P51857 326 aa13.98□□□□□ -0.17
SNF8-213ENST00000514929 SSBP3-AS1Q7Z2R9 100 aa13.98□□□□□ -0.17
SNF8-213ENST00000514929 LINC00518Q8N0U6 118 aa13.98□□□□□ -0.17
SNF8-213ENST00000514929 ST20-AS1Q8NBB2 130 aa13.95□□□□□ -0.18
SNF8-213ENST00000514929 COPS9Q8WXC6 57 aa13.94□□□□□ -0.18
SNF8-213ENST00000514929 C5orf52A6NGY3 159 aa13.93□□□□□ -0.18
SNF8-213ENST00000514929 C9orf153Q5TBE3 101 aa13.93□□□□□ -0.18
SNF8-213ENST00000514929 FP248Q71RG6 208 aaPredicted RBP13.93□□□□□ -0.18
SNF8-213ENST00000514929 PCP2Q8IVA1 136 aa13.91□□□□□ -0.18
SNF8-213ENST00000514929 DHRS4-AS1Q9P1J3 65 aa13.91□□□□□ -0.18
SNF8-213ENST00000514929 IFITM1P13164 125 aa13.9□□□□□ -0.18
SNF8-213ENST00000514929 C6orf99Q4VX62 202 aa13.9□□□□□ -0.18
SNF8-213ENST00000514929 S100A1P23297 94 aa13.89□□□□□ -0.19
SNF8-213ENST00000514929 COX7BP24311 80 aa13.89□□□□□ -0.19
SNF8-213ENST00000514929 S100A2P29034 98 aa13.89□□□□□ -0.19
SNF8-213ENST00000514929 Q6ZVH6 145 aa13.89□□□□□ -0.19
SNF8-213ENST00000514929 MUC2Q02817 5179 aa13.89□□□□□ -0.19
SNF8-213ENST00000514929 SNRPEP62304 92 aaKnown RBP13.88□□□□□ -0.19
SNF8-213ENST00000514929 HIST3H2BBQ8N257 126 aa13.88□□□□□ -0.19
SNF8-213ENST00000514929 ELOF1P60002 83 aaKnown RBP13.87□□□□□ -0.19
SNF8-213ENST00000514929 RPS29P62273 56 aaKnown RBP13.87□□□□□ -0.19
SNF8-213ENST00000514929 HIST1H2BLQ99880 126 aa13.86□□□□□ -0.19
SNF8-213ENST00000514929 A6NDN8 102 aa13.85□□□□□ -0.19
SNF8-213ENST00000514929 MUSTN1Q8IVN3 82 aa13.85□□□□□ -0.19
SNF8-213ENST00000514929 SLC25A34Q6PIV7 304 aa13.84□□□□□ -0.19
SNF8-213ENST00000514929 SPRR1BP22528 89 aa13.83□□□□□ -0.2
SNF8-213ENST00000514929 Q8N377 158 aa13.83□□□□□ -0.2
SNF8-213ENST00000514929 S100A6P06703 90 aa13.82□□□□□ -0.2
SNF8-213ENST00000514929 A0A0U1RQV1 116 aa13.81□□□□□ -0.2
SNF8-213ENST00000514929 SLC25A20O43772 301 aa13.81□□□□□ -0.2
SNF8-213ENST00000514929 TRBV7-6A0A0J9YX20 115 aa13.8□□□□□ -0.2
SNF8-213ENST00000514929 HSBP1L1C9JCN9 74 aa13.8□□□□□ -0.2
SNF8-213ENST00000514929 LAMTOR3Q9UHA4 124 aa13.8□□□□□ -0.2
SNF8-213ENST00000514929 TAL2Q16559 108 aa13.79□□□□□ -0.2
SNF8-213ENST00000514929 A0A1B0GWB2 263 aa13.78□□□□□ -0.2
SNF8-213ENST00000514929 KRTAP13-3Q3SY46 172 aa13.78□□□□□ -0.2
SNF8-213ENST00000514929 DEFB105AQ8NG35 78 aa13.77□□□□□ -0.21
SNF8-213ENST00000514929 TRAV13-2A0A0B4J235 113 aa13.75□□□□□ -0.21
SNF8-213ENST00000514929 TEX49A0A1B0GTD5 131 aa13.72□□□□□ -0.21
SNF8-213ENST00000514929 Q1RN00 199 aa13.72□□□□□ -0.21
SNF8-213ENST00000514929 MUC17Q685J3 4493 aa13.71□□□□□ -0.21
SNF8-213ENST00000514929 A4D1N5 150 aa13.7□□□□□ -0.22
SNF8-213ENST00000514929 HRCT1Q6UXD1 115 aa13.7□□□□□ -0.22
SNF8-213ENST00000514929 SMIM11BQ8TCY0 68 aa13.7□□□□□ -0.22
SNF8-213ENST00000514929 LIMD2Q9BT23 127 aa13.68□□□□□ -0.22
SNF8-213ENST00000514929 SCGB1D1O95968 90 aa13.67□□□□□ -0.22
SNF8-213ENST00000514929 NHP2Q9NX24 153 aaKnown RBP13.67□□□□□ -0.22
SNF8-213ENST00000514929 PRO1933Q9H354 126 aa13.65□□□□□ -0.22
SNF8-213ENST00000514929 IGLV5-48A0A075B6I7 105 aa13.64□□□□□ -0.23
SNF8-213ENST00000514929 LINC01547P58512 204 aaPredicted RBP13.63□□□□□ -0.23
SNF8-213ENST00000514929 VAMP3Q15836 100 aa13.62□□□□□ -0.23
SNF8-213ENST00000514929 SMIM29Q86T20 159 aa13.62□□□□□ -0.23
SNF8-213ENST00000514929 CD164Q04900 197 aa13.6□□□□□ -0.23
SNF8-213ENST00000514929 ASB16-AS1Q495Z4 193 aa13.6□□□□□ -0.23
SNF8-213ENST00000514929 H7C2G1 150 aa13.58□□□□□ -0.24
SNF8-213ENST00000514929 SEC61BP60468 96 aaKnown RBP13.58□□□□□ -0.24
SNF8-213ENST00000514929 HIST1H4GQ99525 98 aa13.57□□□□□ -0.24
SNF8-213ENST00000514929 COX8AP10176 69 aa13.56□□□□□ -0.24
SNF8-213ENST00000514929 LINC00575Q6W349 94 aa13.54□□□□□ -0.24
SNF8-213ENST00000514929 C12orf57Q99622 126 aa13.53□□□□□ -0.24
SNF8-213ENST00000514929 XP32Q5T750 250 aa13.52□□□□□ -0.25
SNF8-213ENST00000514929 FAT4Q6V0I7 4981 aa13.52□□□□□ -0.25
SNF8-213ENST00000514929 A0A0G2JQZ4 141 aa13.51□□□□□ -0.25
SNF8-213ENST00000514929 hADV29S1A0JD25 119 aa13.5□□□□□ -0.25
SNF8-213ENST00000514929 F8WEM9 126 aa13.49□□□□□ -0.25
SNF8-213ENST00000514929 DLEU1O43261 78 aa13.49□□□□□ -0.25
SNF8-213ENST00000514929 Q6ZQY7 126 aa13.48□□□□□ -0.25
SNF8-213ENST00000514929 Q5XG85 94 aa13.47□□□□□ -0.25
SNF8-213ENST00000514929 C14orf144Q96I85 54 aa13.47□□□□□ -0.25
SNF8-213ENST00000514929 LCE2AQ5TA79 106 aaPredicted RBP13.46□□□□□ -0.25
SNF8-213ENST00000514929 PAM16Q9Y3D7 125 aa13.46□□□□□ -0.25
SNF8-213ENST00000514929 BVES-AS1Q5T3Y7 98 aa13.45□□□□□ -0.26
SNF8-213ENST00000514929 C9orf92A6NGG3 77 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms