RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 FAM229AH3BQW9 127 aa5.31□□□□□ -1.56
CCL28-204ENST00000514421 H7C2G1 150 aa5.31□□□□□ -1.56
CCL28-204ENST00000514421 K7ERU9 68 aa5.31□□□□□ -1.56
CCL28-204ENST00000514421 RNF151Q2KHN1 245 aa5.31□□□□□ -1.56
CCL28-204ENST00000514421 SCXQ7RTU7 201 aa5.31□□□□□ -1.56
CCL28-204ENST00000514421 CARD19Q96LW7 228 aa5.31□□□□□ -1.56
CCL28-204ENST00000514421 C6orf48Q9UBA6 75 aa5.31□□□□□ -1.56
CCL28-204ENST00000514421 PKIGQ9Y2B9 76 aa5.31□□□□□ -1.56
CCL28-204ENST00000514421 TRBV10-2A0A0K0K1G8 114 aa5.3□□□□□ -1.56
CCL28-204ENST00000514421 C9orf116Q5BN46 136 aaPredicted RBP5.3□□□□□ -1.56
CCL28-204ENST00000514421 Q6ZRU5 148 aa5.3□□□□□ -1.56
CCL28-204ENST00000514421 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
CCL28-204ENST00000514421 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.3□□□□□ -1.56
CCL28-204ENST00000514421 H3BT86 120 aa5.29□□□□□ -1.56
CCL28-204ENST00000514421 PANO1I0J062 215 aa5.29□□□□□ -1.56
CCL28-204ENST00000514421 TRACP01848 142 aa5.29□□□□□ -1.56
CCL28-204ENST00000514421 TEN1Q86WV5 123 aa5.29□□□□□ -1.56
CCL28-204ENST00000514421 SMIM11BQ8TCY0 68 aa5.29□□□□□ -1.56
CCL28-204ENST00000514421 LOC107984640A0A0U1RRK4 108 aa5.28□□□□□ -1.56
CCL28-204ENST00000514421 C9JAW5 83 aa5.28□□□□□ -1.56
CCL28-204ENST00000514421 H0YGX0 51 aa5.28□□□□□ -1.56
CCL28-204ENST00000514421 SLC25A20O43772 301 aa5.28□□□□□ -1.56
CCL28-204ENST00000514421 TLX1NBP0CAT3 122 aa5.28□□□□□ -1.56
CCL28-204ENST00000514421 CHTF8P0CG12 524 aa5.28□□□□□ -1.56
CCL28-204ENST00000514421 ETDBQ3ZM63 59 aa5.28□□□□□ -1.56
CCL28-204ENST00000514421 Q5VSD8 79 aa5.28□□□□□ -1.56
CCL28-204ENST00000514421 ANKRD29Q8N6D5 301 aa5.28□□□□□ -1.56
CCL28-204ENST00000514421 Q8NDZ9 215 aa5.28□□□□□ -1.56
CCL28-204ENST00000514421 TMEM126AQ9H061 195 aa5.28□□□□□ -1.56
CCL28-204ENST00000514421 LINC00474Q9P2X8 69 aa5.28□□□□□ -1.56
CCL28-204ENST00000514421 A0A087WYN8 130 aa5.27□□□□□ -1.57
CCL28-204ENST00000514421 IGKV2-24A0A0C4DH68 120 aa5.27□□□□□ -1.57
CCL28-204ENST00000514421 NDUFC2-KCTD14E9PQ53 114 aa5.27□□□□□ -1.57
CCL28-204ENST00000514421 IGLV6-57P01721 117 aa5.27□□□□□ -1.57
CCL28-204ENST00000514421 SPACA4Q8TDM5 124 aa5.27□□□□□ -1.57
CCL28-204ENST00000514421 CLEC2BQ92478 149 aa5.27□□□□□ -1.57
CCL28-204ENST00000514421 VPS13BQ7Z7G8 4022 aa5.26□□□□□ -1.57
CCL28-204ENST00000514421 A0A096LNI7 61 aa5.26□□□□□ -1.57
CCL28-204ENST00000514421 A0A1B0GX51 115 aa5.26□□□□□ -1.57
CCL28-204ENST00000514421 PLA2G1BP04054 148 aaKnown RBP5.26□□□□□ -1.57
CCL28-204ENST00000514421 GAGE2BQ13066 116 aa5.26□□□□□ -1.57
CCL28-204ENST00000514421 MTURNQ8N3F0 131 aa5.26□□□□□ -1.57
CCL28-204ENST00000514421 PPDPFLQ8WWR9 84 aa5.26□□□□□ -1.57
CCL28-204ENST00000514421 KRTAP4-9Q9BYQ8 210 aa5.26□□□□□ -1.57
CCL28-204ENST00000514421 PLAC8Q9NZF1 115 aa5.26□□□□□ -1.57
CCL28-204ENST00000514421 ABCA13Q86UQ4 5058 aa5.25□□□□□ -1.57
CCL28-204ENST00000514421 FAM218AQ96MZ4 157 aa5.25□□□□□ -1.57
CCL28-204ENST00000514421 LINC00167Q96N53 147 aa5.25□□□□□ -1.57
CCL28-204ENST00000514421 PLA2G2DQ9UNK4 145 aa5.25□□□□□ -1.57
CCL28-204ENST00000514421 J3QR89 54 aa5.24□□□□□ -1.57
CCL28-204ENST00000514421 INAFM2P0DMQ5 153 aa5.24□□□□□ -1.57
CCL28-204ENST00000514421 VPREB1P12018 145 aa5.24□□□□□ -1.57
CCL28-204ENST00000514421 PRR3P79522 188 aaKnown RBP5.24□□□□□ -1.57
CCL28-204ENST00000514421 TRBV7-6A0A0J9YX20 115 aa5.23□□□□□ -1.57
CCL28-204ENST00000514421 RPL18AQ02543 176 aaKnown RBP5.23□□□□□ -1.57
CCL28-204ENST00000514421 Q6ZRP5 223 aa5.23□□□□□ -1.57
CCL28-204ENST00000514421 C22orf24Q9Y442 160 aa5.23□□□□□ -1.57
CCL28-204ENST00000514421 SRRM2Q9UQ35 2752 aaKnown RBP5.23□□□□□ -1.57
CCL28-204ENST00000514421 PCLOQ9Y6V0 5065 aa5.23□□□□□ -1.57
CCL28-204ENST00000514421 FLG2Q5D862 2391 aaPredicted RBP5.22□□□□□ -1.57
CCL28-204ENST00000514421 IGLV5-37A0A075B6J1 123 aa5.22□□□□□ -1.57
CCL28-204ENST00000514421 A0A1W2PNN7 141 aa5.22□□□□□ -1.57
CCL28-204ENST00000514421 RPL37AP61513 92 aaKnown RBP5.22□□□□□ -1.57
CCL28-204ENST00000514421 GAGE2EQ4V326 116 aa5.22□□□□□ -1.57
CCL28-204ENST00000514421 OR13C6PQ8NH95 151 aa5.22□□□□□ -1.57
CCL28-204ENST00000514421 C7orf33Q8WU49 177 aa5.22□□□□□ -1.57
CCL28-204ENST00000514421 GAGE2DQ9UEU5 116 aa5.22□□□□□ -1.57
CCL28-204ENST00000514421 M0R378 163 aa5.21□□□□□ -1.58
CCL28-204ENST00000514421 NCR3O14931 201 aa5.21□□□□□ -1.58
CCL28-204ENST00000514421 C9orf129Q5T035 196 aaKnown RBP5.21□□□□□ -1.58
CCL28-204ENST00000514421 XAGE1AQ9HD64 81 aa5.21□□□□□ -1.58
CCL28-204ENST00000514421 CBY1Q9Y3M2 126 aa5.21□□□□□ -1.58
CCL28-204ENST00000514421 BAALC-AS2P0C853 105 aa5.2□□□□□ -1.58
CCL28-204ENST00000514421 KRTAP10-4P60372 401 aaPredicted RBP5.2□□□□□ -1.58
CCL28-204ENST00000514421 S100A7L2Q5SY68 101 aa5.2□□□□□ -1.58
CCL28-204ENST00000514421 OBSCN-AS1Q96MR7 158 aa5.2□□□□□ -1.58
CCL28-204ENST00000514421 KRTAP4-2Q9BYR5 136 aa5.2□□□□□ -1.58
CCL28-204ENST00000514421 TRBV10-3A0A0K0K1G6 114 aa5.19□□□□□ -1.58
CCL28-204ENST00000514421 TEX49A0A1B0GTD5 131 aa5.19□□□□□ -1.58
CCL28-204ENST00000514421 C6orf99Q4VX62 202 aa5.19□□□□□ -1.58
CCL28-204ENST00000514421 LINC00575Q6W349 94 aa5.19□□□□□ -1.58
CCL28-204ENST00000514421 TRAV23DV6A0A075B6W5 121 aa5.18□□□□□ -1.58
CCL28-204ENST00000514421 FAM240AA0A1B0GVK7 77 aa5.18□□□□□ -1.58
CCL28-204ENST00000514421 FAM168BA1KXE4 195 aa5.17□□□□□ -1.58
CCL28-204ENST00000514421 H3BQ85 93 aa5.17□□□□□ -1.58
CCL28-204ENST00000514421 ZNF73O43830 326 aaPredicted RBP5.17□□□□□ -1.58
CCL28-204ENST00000514421 DNAL4O96015 105 aa5.17□□□□□ -1.58
CCL28-204ENST00000514421 ELOF1P60002 83 aaKnown RBP5.17□□□□□ -1.58
CCL28-204ENST00000514421 PHF5AQ7RTV0 110 aaKnown RBP5.17□□□□□ -1.58
CCL28-204ENST00000514421 VPS25Q9BRG1 176 aa5.17□□□□□ -1.58
CCL28-204ENST00000514421 CDIP1Q9H305 208 aa5.17□□□□□ -1.58
CCL28-204ENST00000514421 KCNQ1DNQ9H478 68 aa5.17□□□□□ -1.58
CCL28-204ENST00000514421 SNCGO76070 127 aa5.16□□□□□ -1.58
CCL28-204ENST00000514421 SERTAD4-AS1Q5TG53 156 aa5.16□□□□□ -1.58
CCL28-204ENST00000514421 KRTAP7-1Q8IUC3 87 aa5.16□□□□□ -1.58
CCL28-204ENST00000514421 DIRC1Q969H9 104 aa5.16□□□□□ -1.58
CCL28-204ENST00000514421 ORMDL1Q9P0S3 153 aa5.16□□□□□ -1.58
CCL28-204ENST00000514421 hADV29S1A0JD25 119 aa5.15□□□□□ -1.59
CCL28-204ENST00000514421 KRTAP4-16G5E9R7 235 aaPredicted RBP5.15□□□□□ -1.59
CCL28-204ENST00000514421 TMEM256-PLSCR3K7ERE1 68 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms