RNA–Protein interactions for RNA: ENST00000513664.1

PDGFC-209, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-209ENST00000513664 LINC01600Q96MT4 127 aa5.75□□□□□ -1.49
PDGFC-209ENST00000513664 FLG2Q5D862 2391 aaPredicted RBP5.75□□□□□ -1.49
PDGFC-209ENST00000513664 C14orf144Q96I85 54 aa5.74□□□□□ -1.49
PDGFC-209ENST00000513664 HIST1H4GQ99525 98 aa5.74□□□□□ -1.49
PDGFC-209ENST00000513664 HIGD1BQ9P298 99 aa5.74□□□□□ -1.49
PDGFC-209ENST00000513664 TRAV13-2A0A0B4J235 113 aa5.73□□□□□ -1.49
PDGFC-209ENST00000513664 PRLHP81277 87 aa5.73□□□□□ -1.49
PDGFC-209ENST00000513664 DMBT1Q9UGM3 2413 aaPredicted RBP5.73□□□□□ -1.49
PDGFC-209ENST00000513664 A6NDN8 102 aa5.72□□□□□ -1.49
PDGFC-209ENST00000513664 KRTAP4-16G5E9R7 235 aaPredicted RBP5.72□□□□□ -1.49
PDGFC-209ENST00000513664 ZNF73O43830 326 aaPredicted RBP5.72□□□□□ -1.49
PDGFC-209ENST00000513664 ZNF706Q9Y5V0 76 aaPredicted RBP5.72□□□□□ -1.49
PDGFC-209ENST00000513664 RPL13AP40429 203 aaKnown RBP5.71□□□□□ -1.5
PDGFC-209ENST00000513664 TAL2Q16559 108 aa5.71□□□□□ -1.5
PDGFC-209ENST00000513664 A4D1N5 150 aa5.7□□□□□ -1.5
PDGFC-209ENST00000513664 B5MCH6 92 aa5.7□□□□□ -1.5
PDGFC-209ENST00000513664 Q6ZRX8 168 aa5.7□□□□□ -1.5
PDGFC-209ENST00000513664 HIGD2AQ9BW72 106 aa5.7□□□□□ -1.5
PDGFC-209ENST00000513664 TRBV7-6A0A0J9YX20 115 aa5.69□□□□□ -1.5
PDGFC-209ENST00000513664 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
PDGFC-209ENST00000513664 TMEM238LA0A1B0GVL6 79 aa5.68□□□□□ -1.5
PDGFC-209ENST00000513664 A6NJY4 79 aa5.68□□□□□ -1.5
PDGFC-209ENST00000513664 KRTAP1-4P0C5Y4 121 aa5.68□□□□□ -1.5
PDGFC-209ENST00000513664 SMIM6P0DI80 62 aa5.68□□□□□ -1.5
PDGFC-209ENST00000513664 KRTAP10-8P60410 259 aa5.68□□□□□ -1.5
PDGFC-209ENST00000513664 FAM229BQ4G0N7 80 aa5.68□□□□□ -1.5
PDGFC-209ENST00000513664 C2orf91Q6ZV80 131 aa5.68□□□□□ -1.5
PDGFC-209ENST00000513664 UQCR10Q9UDW1 63 aa5.68□□□□□ -1.5
PDGFC-209ENST00000513664 FAT3Q8TDW7 4589 aa5.67□□□□□ -1.5
PDGFC-209ENST00000513664 MT1HL1P0DM35 61 aa5.67□□□□□ -1.5
PDGFC-209ENST00000513664 CRYGAP11844 174 aa5.67□□□□□ -1.5
PDGFC-209ENST00000513664 SMCR5Q8TEV8 140 aa5.67□□□□□ -1.5
PDGFC-209ENST00000513664 DHRS4-AS1Q9P1J3 65 aa5.67□□□□□ -1.5
PDGFC-209ENST00000513664 A0A1B0GWB2 263 aa5.66□□□□□ -1.5
PDGFC-209ENST00000513664 COX7BP24311 80 aa5.66□□□□□ -1.5
PDGFC-209ENST00000513664 ELOF1P60002 83 aaKnown RBP5.66□□□□□ -1.5
PDGFC-209ENST00000513664 VAMP3Q15836 100 aa5.66□□□□□ -1.5
PDGFC-209ENST00000513664 C6orf99Q4VX62 202 aa5.66□□□□□ -1.5
PDGFC-209ENST00000513664 CEND1Q8N111 149 aa5.66□□□□□ -1.5
PDGFC-209ENST00000513664 HSD52Q0P140 79 aa5.65□□□□□ -1.5
PDGFC-209ENST00000513664 PRR26Q8N8Z3 221 aa5.65□□□□□ -1.5
PDGFC-209ENST00000513664 SMIM11BQ8TCY0 68 aa5.65□□□□□ -1.5
PDGFC-209ENST00000513664 RAB37Q96AX2 223 aa5.65□□□□□ -1.5
PDGFC-209ENST00000513664 SPRR4Q96PI1 79 aa5.65□□□□□ -1.5
PDGFC-209ENST00000513664 Q9BRP9 147 aa5.65□□□□□ -1.5
PDGFC-209ENST00000513664 NHP2Q9NX24 153 aaKnown RBP5.65□□□□□ -1.5
PDGFC-209ENST00000513664 A0A0B4J2C4 111 aa5.64□□□□□ -1.51
PDGFC-209ENST00000513664 CFC1BP0CG36 223 aa5.63□□□□□ -1.51
PDGFC-209ENST00000513664 CFC1P0CG37 223 aa5.63□□□□□ -1.51
PDGFC-209ENST00000513664 LINC00483Q53H64 154 aa5.63□□□□□ -1.51
PDGFC-209ENST00000513664 TYMSOSQ8TAI1 123 aa5.63□□□□□ -1.51
PDGFC-209ENST00000513664 C12orf57Q99622 126 aa5.63□□□□□ -1.51
PDGFC-209ENST00000513664 TNXBP22105 4242 aa5.63□□□□□ -1.51
PDGFC-209ENST00000513664 SLC25A20O43772 301 aa5.62□□□□□ -1.51
PDGFC-209ENST00000513664 BVES-AS1Q5T3Y7 98 aa5.62□□□□□ -1.51
PDGFC-209ENST00000513664 LCE2DQ5TA82 110 aaPredicted RBP5.62□□□□□ -1.51
PDGFC-209ENST00000513664 A0A087X002 238 aa5.61□□□□□ -1.51
PDGFC-209ENST00000513664 LOC105371267A0A1B0GV96 52 aa5.61□□□□□ -1.51
PDGFC-209ENST00000513664 ERC2-IT1O76042 136 aa5.61□□□□□ -1.51
PDGFC-209ENST00000513664 ANAPC11Q9NYG5 84 aa5.61□□□□□ -1.51
PDGFC-209ENST00000513664 PRO1854Q9UHT4 67 aa5.61□□□□□ -1.51
PDGFC-209ENST00000513664 SNCGO76070 127 aa5.6□□□□□ -1.51
PDGFC-209ENST00000513664 CTAG1AP78358 180 aa5.6□□□□□ -1.51
PDGFC-209ENST00000513664 GAGE2AQ6NT46 116 aa5.6□□□□□ -1.51
PDGFC-209ENST00000513664 TSTD3H0UI37 97 aa5.59□□□□□ -1.51
PDGFC-209ENST00000513664 FXYD2P54710 66 aa5.59□□□□□ -1.51
PDGFC-209ENST00000513664 HERC1Q15751 4861 aa5.59□□□□□ -1.52
PDGFC-209ENST00000513664 H0YGX0 51 aa5.58□□□□□ -1.52
PDGFC-209ENST00000513664 H7C2G1 150 aa5.58□□□□□ -1.52
PDGFC-209ENST00000513664 SPRR1BP22528 89 aa5.58□□□□□ -1.52
PDGFC-209ENST00000513664 Q1RN00 199 aa5.58□□□□□ -1.52
PDGFC-209ENST00000513664 KRTAP13-2Q52LG2 175 aa5.58□□□□□ -1.52
PDGFC-209ENST00000513664 PRO1933Q9H354 126 aa5.58□□□□□ -1.52
PDGFC-209ENST00000513664 TEX49A0A1B0GTD5 131 aa5.57□□□□□ -1.52
PDGFC-209ENST00000513664 hADV29S1A0JD25 119 aa5.57□□□□□ -1.52
PDGFC-209ENST00000513664 M0R143 59 aa5.57□□□□□ -1.52
PDGFC-209ENST00000513664 SPAG11AQ6PDA7 123 aa5.57□□□□□ -1.52
PDGFC-209ENST00000513664 LINC00575Q6W349 94 aa5.57□□□□□ -1.52
PDGFC-209ENST00000513664 SSBP3-AS1Q7Z2R9 100 aa5.56□□□□□ -1.52
PDGFC-209ENST00000513664 LINC00304Q8N9R0 145 aa5.56□□□□□ -1.52
PDGFC-209ENST00000513664 ST20-AS1Q8NBB2 130 aa5.56□□□□□ -1.52
PDGFC-209ENST00000513664 LAMTOR3Q9UHA4 124 aa5.56□□□□□ -1.52
PDGFC-209ENST00000513664 IGLV5-48A0A075B6I7 105 aa5.55□□□□□ -1.52
PDGFC-209ENST00000513664 GHRHP01286 108 aa5.55□□□□□ -1.52
PDGFC-209ENST00000513664 C4orf48Q5BLP8 95 aa5.55□□□□□ -1.52
PDGFC-209ENST00000513664 C3orf22Q8N5N4 141 aa5.55□□□□□ -1.52
PDGFC-209ENST00000513664 IGLV9-49A0A0B4J1Y8 123 aa5.54□□□□□ -1.52
PDGFC-209ENST00000513664 A0A1B0GX51 115 aa5.54□□□□□ -1.52
PDGFC-209ENST00000513664 COX6CP09669 75 aa5.54□□□□□ -1.52
PDGFC-209ENST00000513664 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.54□□□□□ -1.52
PDGFC-209ENST00000513664 DEFB105AQ8NG35 78 aa5.54□□□□□ -1.52
PDGFC-209ENST00000513664 PPDPFLQ8WWR9 84 aa5.54□□□□□ -1.52
PDGFC-209ENST00000513664 PSMB2P49721 201 aa5.53□□□□□ -1.52
PDGFC-209ENST00000513664 MOBPQ13875 183 aa5.53□□□□□ -1.52
PDGFC-209ENST00000513664 OCIAD2Q56VL3 154 aa5.53□□□□□ -1.52
PDGFC-209ENST00000513664 C9orf153Q5TBE3 101 aa5.53□□□□□ -1.52
PDGFC-209ENST00000513664 Q8NBF4 154 aa5.53□□□□□ -1.52
PDGFC-209ENST00000513664 K7ERJ3 54 aa5.52□□□□□ -1.53
PDGFC-209ENST00000513664 SPINK1P00995 79 aa5.52□□□□□ -1.53
PDGFC-209ENST00000513664 Q6ZQY7 126 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms