RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 S100A12P80511 92 aa3.18□□□□□ -1.9
MSH3-202ENST00000512258 PHF5AQ7RTV0 110 aaKnown RBP3.18□□□□□ -1.9
MSH3-202ENST00000512258 MUSTN1Q8IVN3 82 aa3.18□□□□□ -1.9
MSH3-202ENST00000512258 LINC00308Q8TCZ7 52 aa3.18□□□□□ -1.9
MSH3-202ENST00000512258 PLAC8Q9NZF1 115 aa3.18□□□□□ -1.9
MSH3-202ENST00000512258 APOBP04114 4563 aaKnown RBP3.18□□□□□ -1.9
MSH3-202ENST00000512258 RYR1P21817 5038 aa3.17□□□□□ -1.9
MSH3-202ENST00000512258 GAGE10A6NGK3 116 aa3.17□□□□□ -1.9
MSH3-202ENST00000512258 LINC00587B1AMM8 73 aa3.17□□□□□ -1.9
MSH3-202ENST00000512258 EPM2AB3EWF7 344 aa3.17□□□□□ -1.9
MSH3-202ENST00000512258 TMEM238C9JI98 176 aa3.17□□□□□ -1.9
MSH3-202ENST00000512258 M0QXV9 152 aa3.17□□□□□ -1.9
MSH3-202ENST00000512258 CFC1BP0CG36 223 aa3.17□□□□□ -1.9
MSH3-202ENST00000512258 CFC1P0CG37 223 aa3.17□□□□□ -1.9
MSH3-202ENST00000512258 SPANXDQ9BXN6 97 aa3.17□□□□□ -1.9
MSH3-202ENST00000512258 SPANXCQ9NY87 97 aa3.17□□□□□ -1.9
MSH3-202ENST00000512258 LINC00474Q9P2X8 69 aa3.17□□□□□ -1.9
MSH3-202ENST00000512258 C22orf24Q9Y442 160 aa3.17□□□□□ -1.9
MSH3-202ENST00000512258 IGLV5-37A0A075B6J1 123 aa3.16□□□□□ -1.9
MSH3-202ENST00000512258 IGKV2-28A0A075B6P5 120 aa3.16□□□□□ -1.9
MSH3-202ENST00000512258 LOC107984156A0A0G2JMH3 177 aa3.16□□□□□ -1.9
MSH3-202ENST00000512258 RPL37AP8A6NKH3 93 aa3.16□□□□□ -1.9
MSH3-202ENST00000512258 CDK2AP2O75956 126 aa3.16□□□□□ -1.9
MSH3-202ENST00000512258 IGKV2D-28P01615 120 aa3.16□□□□□ -1.9
MSH3-202ENST00000512258 SRSF9Q13242 221 aaKnown RBP eCLIP3.16□□□□□ -1.9
MSH3-202ENST00000512258 ARL17AQ8IVW1 177 aa3.16□□□□□ -1.9
MSH3-202ENST00000512258 C7orf33Q8WU49 177 aa3.16□□□□□ -1.9
MSH3-202ENST00000512258 LINC00167Q96N53 147 aa3.16□□□□□ -1.9
MSH3-202ENST00000512258 HIST1H4GQ99525 98 aa3.16□□□□□ -1.9
MSH3-202ENST00000512258 MIEN1Q9BRT3 115 aa3.16□□□□□ -1.9
MSH3-202ENST00000512258 SPANXB1Q9NS25 103 aaPredicted RBP3.16□□□□□ -1.9
MSH3-202ENST00000512258 HIGD1BQ9P298 99 aa3.16□□□□□ -1.9
MSH3-202ENST00000512258 UQCR10Q9UDW1 63 aa3.16□□□□□ -1.9
MSH3-202ENST00000512258 PKIGQ9Y2B9 76 aa3.16□□□□□ -1.9
MSH3-202ENST00000512258 HNRNPA3P51991 378 aaKnown RBP3.15□□□□□ -1.91
MSH3-202ENST00000512258 MRPL55Q7Z7F7 128 aaKnown RBP3.15□□□□□ -1.91
MSH3-202ENST00000512258 NKAPP1Q8N9T2 125 aa3.15□□□□□ -1.91
MSH3-202ENST00000512258 TRBV10-3A0A0K0K1G6 114 aa3.14□□□□□ -1.91
MSH3-202ENST00000512258 A4D1N5 150 aa3.14□□□□□ -1.91
MSH3-202ENST00000512258 IFITM1P13164 125 aa3.14□□□□□ -1.91
MSH3-202ENST00000512258 FXYD2P54710 66 aa3.14□□□□□ -1.91
MSH3-202ENST00000512258 CTAG1AP78358 180 aa3.14□□□□□ -1.91
MSH3-202ENST00000512258 RPL24P83731 157 aaKnown RBP3.14□□□□□ -1.91
MSH3-202ENST00000512258 LINC00337Q8N6G1 96 aa3.14□□□□□ -1.91
MSH3-202ENST00000512258 HSPG2P98160 4391 aa3.13□□□□□ -1.91
MSH3-202ENST00000512258 IGLV1-50A0A075B6I6 118 aa3.13□□□□□ -1.91
MSH3-202ENST00000512258 M0R378 163 aa3.13□□□□□ -1.91
MSH3-202ENST00000512258 NDUFC2O95298 119 aa3.13□□□□□ -1.91
MSH3-202ENST00000512258 KRTAP10-4P60372 401 aaPredicted RBP3.13□□□□□ -1.91
MSH3-202ENST00000512258 UBE2BP63146 152 aa3.13□□□□□ -1.91
MSH3-202ENST00000512258 HSD52Q0P140 79 aa3.13□□□□□ -1.91
MSH3-202ENST00000512258 Q6ZVH6 145 aa3.13□□□□□ -1.91
MSH3-202ENST00000512258 CEND1Q8N111 149 aa3.13□□□□□ -1.91
MSH3-202ENST00000512258 PSORS1C2Q9UIG4 136 aa3.13□□□□□ -1.91
MSH3-202ENST00000512258 TRBV10-2A0A0K0K1G8 114 aa3.12□□□□□ -1.91
MSH3-202ENST00000512258 TSTD3H0UI37 97 aa3.12□□□□□ -1.91
MSH3-202ENST00000512258 K7ERJ3 54 aa3.12□□□□□ -1.91
MSH3-202ENST00000512258 IGLV6-57P01721 117 aa3.12□□□□□ -1.91
MSH3-202ENST00000512258 DDTP30046 118 aa3.12□□□□□ -1.91
MSH3-202ENST00000512258 HINT1P49773 126 aaPredicted RBP3.12□□□□□ -1.91
MSH3-202ENST00000512258 TAL2Q16559 108 aa3.12□□□□□ -1.91
MSH3-202ENST00000512258 LBHQ53QV2 105 aaPredicted RBP3.12□□□□□ -1.91
MSH3-202ENST00000512258 BVES-AS1Q5T3Y7 98 aa3.12□□□□□ -1.91
MSH3-202ENST00000512258 Q5VSD8 79 aa3.12□□□□□ -1.91
MSH3-202ENST00000512258 OR13C6PQ8NH95 151 aa3.12□□□□□ -1.91
MSH3-202ENST00000512258 PPDPFQ9H3Y8 114 aa3.12□□□□□ -1.91
MSH3-202ENST00000512258 HERC2O95714 4834 aa3.12□□□□□ -1.91
MSH3-202ENST00000512258 FAT1Q14517 4588 aa3.11□□□□□ -1.91
MSH3-202ENST00000512258 A6NDN8 102 aa3.11□□□□□ -1.91
MSH3-202ENST00000512258 RPL37AP61513 92 aaKnown RBP3.11□□□□□ -1.91
MSH3-202ENST00000512258 C1orf137Q5JT78 98 aa3.11□□□□□ -1.91
MSH3-202ENST00000512258 S100A7L2Q5SY68 101 aa3.11□□□□□ -1.91
MSH3-202ENST00000512258 COPS9Q8WXC6 57 aa3.11□□□□□ -1.91
MSH3-202ENST00000512258 TMEM126AQ9H061 195 aa3.11□□□□□ -1.91
MSH3-202ENST00000512258 KCNQ1DNQ9H478 68 aa3.11□□□□□ -1.91
MSH3-202ENST00000512258 SRRM2Q9UQ35 2752 aaKnown RBP3.1□□□□□ -1.91
MSH3-202ENST00000512258 TRAV23DV6A0A075B6W5 121 aa3.1□□□□□ -1.91
MSH3-202ENST00000512258 PCP4L1A6NKN8 68 aa3.1□□□□□ -1.91
MSH3-202ENST00000512258 KRTAP4-16G5E9R7 235 aaPredicted RBP3.1□□□□□ -1.91
MSH3-202ENST00000512258 H7C2G1 150 aa3.1□□□□□ -1.91
MSH3-202ENST00000512258 RPL13AP40429 203 aaKnown RBP3.1□□□□□ -1.91
MSH3-202ENST00000512258 PRLHP81277 87 aa3.1□□□□□ -1.91
MSH3-202ENST00000512258 BATFQ16520 125 aa3.1□□□□□ -1.91
MSH3-202ENST00000512258 REG3GQ6UW15 175 aa3.1□□□□□ -1.91
MSH3-202ENST00000512258 SMIM11BQ8TCY0 68 aa3.1□□□□□ -1.91
MSH3-202ENST00000512258 NHP2Q9NX24 153 aaKnown RBP3.1□□□□□ -1.91
MSH3-202ENST00000512258 TRAV13-2A0A0B4J235 113 aa3.09□□□□□ -1.91
MSH3-202ENST00000512258 A0A0B4J2C4 111 aa3.09□□□□□ -1.91
MSH3-202ENST00000512258 A0A1B0GWB2 263 aa3.09□□□□□ -1.91
MSH3-202ENST00000512258 ZNF73O43830 326 aaPredicted RBP3.09□□□□□ -1.91
MSH3-202ENST00000512258 BCE1O60756 84 aa3.09□□□□□ -1.91
MSH3-202ENST00000512258 IGLV7-43P04211 117 aa3.09□□□□□ -1.91
MSH3-202ENST00000512258 SPRR1AP35321 89 aa3.09□□□□□ -1.91
MSH3-202ENST00000512258 FAM19A1Q7Z5A9 133 aa3.09□□□□□ -1.91
MSH3-202ENST00000512258 KRTAP13-1Q8IUC0 172 aa3.09□□□□□ -1.91
MSH3-202ENST00000512258 RAB37Q96AX2 223 aa3.09□□□□□ -1.91
MSH3-202ENST00000512258 VPS13BQ7Z7G8 4022 aa3.09□□□□□ -1.92
MSH3-202ENST00000512258 ABCA13Q86UQ4 5058 aa3.08□□□□□ -1.92
MSH3-202ENST00000512258 C6orf99Q4VX62 202 aa3.08□□□□□ -1.92
MSH3-202ENST00000512258 NAA38Q9BRA0 125 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms