RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 DMXL1Q9Y485 3027 aa7.57□□□□□ -1.2
CPNE4-209ENST00000512055 DMDP11532 3685 aa7.57□□□□□ -1.2
CPNE4-209ENST00000512055 NHLRC4P0CG21 123 aaPredicted RBP7.57□□□□□ -1.2
CPNE4-209ENST00000512055 LINC00337Q8N6G1 96 aa7.56□□□□□ -1.2
CPNE4-209ENST00000512055 MIR22HGQ0VDD5 57 aa7.56□□□□□ -1.2
CPNE4-209ENST00000512055 APLNQ9ULZ1 77 aa7.56□□□□□ -1.2
CPNE4-209ENST00000512055 COA5Q86WW8 74 aa7.55□□□□□ -1.2
CPNE4-209ENST00000512055 TRAV22A0A0B4J277 110 aa7.54□□□□□ -1.2
CPNE4-209ENST00000512055 WIPF1O43516 503 aa7.54□□□□□ -1.2
CPNE4-209ENST00000512055 FHL3Q13643 280 aa7.54□□□□□ -1.2
CPNE4-209ENST00000512055 H3BPC8 53 aa7.54□□□□□ -1.2
CPNE4-209ENST00000512055 A0A096LNT2 108 aa7.53□□□□□ -1.2
CPNE4-209ENST00000512055 HELZ2Q9BYK8 2649 aaKnown RBP7.53□□□□□ -1.2
CPNE4-209ENST00000512055 C9orf129Q5T035 196 aaKnown RBP7.52□□□□□ -1.21
CPNE4-209ENST00000512055 PRO0461Q9UI25 63 aa7.52□□□□□ -1.21
CPNE4-209ENST00000512055 J3QL48 77 aa7.52□□□□□ -1.21
CPNE4-209ENST00000512055 KIAA0087Q14695 138 aa7.52□□□□□ -1.21
CPNE4-209ENST00000512055 KALRNO60229 2985 aa7.52□□□□□ -1.21
CPNE4-209ENST00000512055 USP24Q9UPU5 2620 aa7.51□□□□□ -1.21
CPNE4-209ENST00000512055 ERC2-IT1O76042 136 aa7.51□□□□□ -1.21
CPNE4-209ENST00000512055 LINC01556Q5JQF7 62 aa7.51□□□□□ -1.21
CPNE4-209ENST00000512055 IGSF10Q6WRI0 2623 aa7.51□□□□□ -1.21
CPNE4-209ENST00000512055 LRBAP50851 2863 aa7.5□□□□□ -1.21
CPNE4-209ENST00000512055 WDFY3Q8IZQ1 3526 aa7.5□□□□□ -1.21
CPNE4-209ENST00000512055 CFAP47Q6ZTR5 3102 aa7.5□□□□□ -1.21
CPNE4-209ENST00000512055 ZZEF1O43149 2961 aa7.49□□□□□ -1.21
CPNE4-209ENST00000512055 COL12A1Q99715 3063 aa7.49□□□□□ -1.21
CPNE4-209ENST00000512055 RBM12B-AS1Q9P1G2 102 aa7.49□□□□□ -1.21
CPNE4-209ENST00000512055 ATRQ13535 2644 aa7.48□□□□□ -1.21
CPNE4-209ENST00000512055 FLNCQ14315 2725 aa7.48□□□□□ -1.21
CPNE4-209ENST00000512055 SMCR5Q8TEV8 140 aa7.46□□□□□ -1.22
CPNE4-209ENST00000512055 FAM218AQ96MZ4 157 aa7.46□□□□□ -1.22
CPNE4-209ENST00000512055 TACC2O95359 2948 aa7.45□□□□□ -1.22
CPNE4-209ENST00000512055 Q6ZQT0 140 aa7.44□□□□□ -1.22
CPNE4-209ENST00000512055 RPL37AP61513 92 aaKnown RBP7.44□□□□□ -1.22
CPNE4-209ENST00000512055 A0A1B0GUV1 79 aa7.43□□□□□ -1.22
CPNE4-209ENST00000512055 SPACA4Q8TDM5 124 aa7.43□□□□□ -1.22
CPNE4-209ENST00000512055 IGLV5-39A0A0G2JS06 123 aa7.43□□□□□ -1.22
CPNE4-209ENST00000512055 ZNF575Q86XF7 245 aa7.43□□□□□ -1.22
CPNE4-209ENST00000512055 ASPMQ8IZT6 3477 aa7.42□□□□□ -1.22
CPNE4-209ENST00000512055 A0A0A0MQY5 61 aa7.42□□□□□ -1.22
CPNE4-209ENST00000512055 ELOF1P60002 83 aaKnown RBP7.42□□□□□ -1.22
CPNE4-209ENST00000512055 CDC42SE1Q9NRR8 79 aa7.42□□□□□ -1.22
CPNE4-209ENST00000512055 IGHV3OR16-9A0A0B4J2B5 98 aa7.42□□□□□ -1.22
CPNE4-209ENST00000512055 PRR15Q8IV56 129 aa7.42□□□□□ -1.22
CPNE4-209ENST00000512055 MGAM2Q2M2H8 2515 aa7.41□□□□□ -1.22
CPNE4-209ENST00000512055 TRBV7-4A0A0J9YYF1 115 aa7.41□□□□□ -1.22
CPNE4-209ENST00000512055 CSNK1G2-AS1Q8NCQ2 148 aa7.41□□□□□ -1.22
CPNE4-209ENST00000512055 CHD6Q8TD26 2715 aa7.41□□□□□ -1.22
CPNE4-209ENST00000512055 LYPD5Q6UWN5 251 aa7.4□□□□□ -1.22
CPNE4-209ENST00000512055 KRTAP1-3Q8IUG1 177 aa7.4□□□□□ -1.22
CPNE4-209ENST00000512055 IGLV5-52A0A0A0MRZ9 124 aa7.4□□□□□ -1.23
CPNE4-209ENST00000512055 C1orf134Q5TEV5 83 aa7.39□□□□□ -1.23
CPNE4-209ENST00000512055 Q6ZRU5 148 aa7.39□□□□□ -1.23
CPNE4-209ENST00000512055 Q8NBF4 154 aa7.39□□□□□ -1.23
CPNE4-209ENST00000512055 IGLV5-45A0A087WSX0 123 aa7.38□□□□□ -1.23
CPNE4-209ENST00000512055 EPM2AB3EWF7 344 aa7.38□□□□□ -1.23
CPNE4-209ENST00000512055 KLKP1Q107X0 134 aa7.38□□□□□ -1.23
CPNE4-209ENST00000512055 MOBPQ13875 183 aa7.38□□□□□ -1.23
CPNE4-209ENST00000512055 C22orf24Q9Y442 160 aa7.38□□□□□ -1.23
CPNE4-209ENST00000512055 MAST4O15021 2626 aa7.38□□□□□ -1.23
CPNE4-209ENST00000512055 TEX15Q9BXT5 2789 aa7.38□□□□□ -1.23
CPNE4-209ENST00000512055 LOC110117498A0A087WWA1 95 aa7.37□□□□□ -1.23
CPNE4-209ENST00000512055 H7BZZ5 65 aa7.37□□□□□ -1.23
CPNE4-209ENST00000512055 FAM229AH3BQW9 127 aa7.36□□□□□ -1.23
CPNE4-209ENST00000512055 A0A1B0GW54 56 aa7.36□□□□□ -1.23
CPNE4-209ENST00000512055 LINC00313P59037 77 aa7.36□□□□□ -1.23
CPNE4-209ENST00000512055 LINC00476Q8WZB0 136 aa7.36□□□□□ -1.23
CPNE4-209ENST00000512055 LAMA5O15230 3695 aa7.36□□□□□ -1.23
CPNE4-209ENST00000512055 GIG44P09565 113 aaPredicted RBP7.35□□□□□ -1.23
CPNE4-209ENST00000512055 TEP1Q99973 2627 aaKnown RBP7.35□□□□□ -1.23
CPNE4-209ENST00000512055 K7EQZ3 153 aa7.34□□□□□ -1.23
CPNE4-209ENST00000512055 A0A0D9SG42 100 aa7.34□□□□□ -1.24
CPNE4-209ENST00000512055 KRTAP24-1Q3LI83 254 aa7.34□□□□□ -1.24
CPNE4-209ENST00000512055 IGLV6-57P01721 117 aa7.33□□□□□ -1.24
CPNE4-209ENST00000512055 KRTAP10-3P60369 221 aa7.33□□□□□ -1.24
CPNE4-209ENST00000512055 LITAFQ99732 161 aa7.33□□□□□ -1.24
CPNE4-209ENST00000512055 C19orf73Q9NVV2 129 aa7.33□□□□□ -1.24
CPNE4-209ENST00000512055 A8MWP4 228 aa7.32□□□□□ -1.24
CPNE4-209ENST00000512055 EIF4EBP3O60516 100 aaPredicted RBP7.32□□□□□ -1.24
CPNE4-209ENST00000512055 KRTAP1-1Q07627 177 aa7.32□□□□□ -1.24
CPNE4-209ENST00000512055 Q8NAQ8 132 aa7.32□□□□□ -1.24
CPNE4-209ENST00000512055 PLA2G2DQ9UNK4 145 aa7.32□□□□□ -1.24
CPNE4-209ENST00000512055 DCHS1Q96JQ0 3298 aa7.31□□□□□ -1.24
CPNE4-209ENST00000512055 Q1T7F1 81 aa7.31□□□□□ -1.24
CPNE4-209ENST00000512055 PRAC1Q96KF2 57 aa7.31□□□□□ -1.24
CPNE4-209ENST00000512055 ITPR1Q14643 2758 aa7.31□□□□□ -1.24
CPNE4-209ENST00000512055 UNC79Q9P2D8 2635 aa7.3□□□□□ -1.24
CPNE4-209ENST00000512055 LINC00167Q96N53 147 aa7.3□□□□□ -1.24
CPNE4-209ENST00000512055 COX6B2Q6YFQ2 88 aa7.29□□□□□ -1.24
CPNE4-209ENST00000512055 GCN1Q92616 2671 aaKnown RBP7.28□□□□□ -1.24
CPNE4-209ENST00000512055 MRPL34Q9BQ48 92 aaKnown RBP7.28□□□□□ -1.24
CPNE4-209ENST00000512055 ST20-AS1Q8NBB2 130 aa7.28□□□□□ -1.24
CPNE4-209ENST00000512055 Q96NJ1 140 aa7.28□□□□□ -1.24
CPNE4-209ENST00000512055 CR1P17927 2039 aa7.28□□□□□ -1.24
CPNE4-209ENST00000512055 NBEAL2Q6ZNJ1 2754 aa7.25□□□□□ -1.25
CPNE4-209ENST00000512055 SETXQ7Z333 2677 aaKnown RBP7.24□□□□□ -1.25
CPNE4-209ENST00000512055 C16orf90A8MZG2 172 aa7.23□□□□□ -1.25
CPNE4-209ENST00000512055 Q6ZRX8 168 aa7.23□□□□□ -1.25
CPNE4-209ENST00000512055 C8orf17Q9NRJ1 99 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms