RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 Q9BRP9 147 aa7.69□□□□□ -1.18
RNF4-215ENST00000511843 ZNF706Q9Y5V0 76 aaPredicted RBP7.69□□□□□ -1.18
RNF4-215ENST00000511843 TRAV23DV6A0A075B6W5 121 aa7.67□□□□□ -1.18
RNF4-215ENST00000511843 ANKRD39Q53RE8 183 aa7.67□□□□□ -1.18
RNF4-215ENST00000511843 GAGE2AQ6NT46 116 aa7.67□□□□□ -1.18
RNF4-215ENST00000511843 Q6ZRX8 168 aa7.67□□□□□ -1.18
RNF4-215ENST00000511843 TIMM17BO60830 172 aa7.66□□□□□ -1.18
RNF4-215ENST00000511843 Q8NBF4 154 aa7.65□□□□□ -1.18
RNF4-215ENST00000511843 C20orf202A1L168 122 aa7.64□□□□□ -1.19
RNF4-215ENST00000511843 ZNF73O43830 326 aaPredicted RBP7.64□□□□□ -1.19
RNF4-215ENST00000511843 OR13C6PQ8NH95 151 aa7.64□□□□□ -1.19
RNF4-215ENST00000511843 SPANXCQ9NY87 97 aa7.64□□□□□ -1.19
RNF4-215ENST00000511843 IGLV9-49A0A0B4J1Y8 123 aa7.63□□□□□ -1.19
RNF4-215ENST00000511843 LINC00483Q53H64 154 aa7.63□□□□□ -1.19
RNF4-215ENST00000511843 MOBPQ13875 183 aa7.62□□□□□ -1.19
RNF4-215ENST00000511843 SCGB1D4Q6XE38 83 aa7.62□□□□□ -1.19
RNF4-215ENST00000511843 PCP2Q8IVA1 136 aa7.62□□□□□ -1.19
RNF4-215ENST00000511843 ST20-AS1Q8NBB2 130 aa7.62□□□□□ -1.19
RNF4-215ENST00000511843 HIST3H2BBQ8N257 126 aa7.61□□□□□ -1.19
RNF4-215ENST00000511843 S100A1P23297 94 aa7.6□□□□□ -1.19
RNF4-215ENST00000511843 HIST1H2BLQ99880 126 aa7.6□□□□□ -1.19
RNF4-215ENST00000511843 JOSD1Q15040 202 aaPredicted RBP7.59□□□□□ -1.19
RNF4-215ENST00000511843 C4orf48Q5BLP8 95 aa7.59□□□□□ -1.19
RNF4-215ENST00000511843 SPANXDQ9BXN6 97 aa7.59□□□□□ -1.19
RNF4-215ENST00000511843 IGLV7-46A0A075B6I9 117 aa7.58□□□□□ -1.2
RNF4-215ENST00000511843 SPAG11AQ6PDA7 123 aa7.58□□□□□ -1.2
RNF4-215ENST00000511843 S100A2P29034 98 aa7.57□□□□□ -1.2
RNF4-215ENST00000511843 HINT1P49773 126 aaPredicted RBP7.56□□□□□ -1.2
RNF4-215ENST00000511843 C6orf99Q4VX62 202 aa7.56□□□□□ -1.2
RNF4-215ENST00000511843 MUSTN1Q8IVN3 82 aa7.56□□□□□ -1.2
RNF4-215ENST00000511843 C9orf153Q5TBE3 101 aa7.55□□□□□ -1.2
RNF4-215ENST00000511843 LINC00518Q8N0U6 118 aa7.55□□□□□ -1.2
RNF4-215ENST00000511843 CBY1Q9Y3M2 126 aa7.55□□□□□ -1.2
RNF4-215ENST00000511843 COX7BP24311 80 aa7.54□□□□□ -1.2
RNF4-215ENST00000511843 CTAG1AP78358 180 aa7.54□□□□□ -1.2
RNF4-215ENST00000511843 S100A6P06703 90 aa7.53□□□□□ -1.2
RNF4-215ENST00000511843 IFITM1P13164 125 aa7.53□□□□□ -1.2
RNF4-215ENST00000511843 ELOF1P60002 83 aaKnown RBP7.53□□□□□ -1.2
RNF4-215ENST00000511843 TPRXLQ17RH7 258 aa7.53□□□□□ -1.2
RNF4-215ENST00000511843 A6NDN8 102 aa7.52□□□□□ -1.21
RNF4-215ENST00000511843 SPINK1P00995 79 aa7.52□□□□□ -1.21
RNF4-215ENST00000511843 AKR1D1P51857 326 aa7.52□□□□□ -1.21
RNF4-215ENST00000511843 SNRPEP62304 92 aaKnown RBP7.52□□□□□ -1.21
RNF4-215ENST00000511843 SSBP3-AS1Q7Z2R9 100 aa7.52□□□□□ -1.21
RNF4-215ENST00000511843 CDIP1Q9H305 208 aa7.52□□□□□ -1.21
RNF4-215ENST00000511843 DHRS4-AS1Q9P1J3 65 aa7.52□□□□□ -1.21
RNF4-215ENST00000511843 MUC2Q02817 5179 aa7.51□□□□□ -1.21
RNF4-215ENST00000511843 Q6ZVH6 145 aa7.5□□□□□ -1.21
RNF4-215ENST00000511843 DEFB105AQ8NG35 78 aa7.5□□□□□ -1.21
RNF4-215ENST00000511843 COPS9Q8WXC6 57 aa7.5□□□□□ -1.21
RNF4-215ENST00000511843 HSBP1L1C9JCN9 74 aa7.49□□□□□ -1.21
RNF4-215ENST00000511843 SPRR1BP22528 89 aa7.49□□□□□ -1.21
RNF4-215ENST00000511843 Q8N377 158 aa7.49□□□□□ -1.21
RNF4-215ENST00000511843 C5orf52A6NGY3 159 aa7.48□□□□□ -1.21
RNF4-215ENST00000511843 Q1RN00 199 aa7.48□□□□□ -1.21
RNF4-215ENST00000511843 FP248Q71RG6 208 aaPredicted RBP7.48□□□□□ -1.21
RNF4-215ENST00000511843 SCGB1D1O95968 90 aa7.47□□□□□ -1.21
RNF4-215ENST00000511843 TAL2Q16559 108 aa7.47□□□□□ -1.21
RNF4-215ENST00000511843 HRCT1Q6UXD1 115 aa7.47□□□□□ -1.21
RNF4-215ENST00000511843 SMIM11BQ8TCY0 68 aa7.47□□□□□ -1.21
RNF4-215ENST00000511843 KRTAP13-3Q3SY46 172 aa7.46□□□□□ -1.22
RNF4-215ENST00000511843 TRAV13-2A0A0B4J235 113 aa7.45□□□□□ -1.22
RNF4-215ENST00000511843 TRBV7-6A0A0J9YX20 115 aa7.45□□□□□ -1.22
RNF4-215ENST00000511843 A0A1B0GWB2 263 aa7.45□□□□□ -1.22
RNF4-215ENST00000511843 RPS29P62273 56 aaKnown RBP7.45□□□□□ -1.22
RNF4-215ENST00000511843 A4D1N5 150 aa7.44□□□□□ -1.22
RNF4-215ENST00000511843 LAMTOR3Q9UHA4 124 aa7.44□□□□□ -1.22
RNF4-215ENST00000511843 SLC25A20O43772 301 aa7.43□□□□□ -1.22
RNF4-215ENST00000511843 LINC01547P58512 204 aaPredicted RBP7.43□□□□□ -1.22
RNF4-215ENST00000511843 SLC25A34Q6PIV7 304 aa7.43□□□□□ -1.22
RNF4-215ENST00000511843 C12orf57Q99622 126 aa7.43□□□□□ -1.22
RNF4-215ENST00000511843 A0A0G2JQZ4 141 aa7.42□□□□□ -1.22
RNF4-215ENST00000511843 TEX49A0A1B0GTD5 131 aa7.42□□□□□ -1.22
RNF4-215ENST00000511843 SMIM29Q86T20 159 aa7.42□□□□□ -1.22
RNF4-215ENST00000511843 MUC17Q685J3 4493 aa7.41□□□□□ -1.22
RNF4-215ENST00000511843 IGLV5-48A0A075B6I7 105 aa7.4□□□□□ -1.22
RNF4-215ENST00000511843 COX8AP10176 69 aa7.4□□□□□ -1.22
RNF4-215ENST00000511843 H7C2G1 150 aa7.39□□□□□ -1.23
RNF4-215ENST00000511843 HIST1H4GQ99525 98 aa7.39□□□□□ -1.23
RNF4-215ENST00000511843 C14orf144Q96I85 54 aa7.38□□□□□ -1.23
RNF4-215ENST00000511843 PAM16Q9Y3D7 125 aa7.38□□□□□ -1.23
RNF4-215ENST00000511843 PRO1933Q9H354 126 aa7.37□□□□□ -1.23
RNF4-215ENST00000511843 LINC00575Q6W349 94 aa7.36□□□□□ -1.23
RNF4-215ENST00000511843 LIMD2Q9BT23 127 aa7.36□□□□□ -1.23
RNF4-215ENST00000511843 NHP2Q9NX24 153 aaKnown RBP7.36□□□□□ -1.23
RNF4-215ENST00000511843 FAT4Q6V0I7 4981 aa7.35□□□□□ -1.23
RNF4-215ENST00000511843 VAMP3Q15836 100 aa7.35□□□□□ -1.23
RNF4-215ENST00000511843 SPATA45Q537H7 98 aa7.35□□□□□ -1.23
RNF4-215ENST00000511843 A0A0U1RQV1 116 aa7.34□□□□□ -1.23
RNF4-215ENST00000511843 DLEU1O43261 78 aa7.34□□□□□ -1.23
RNF4-215ENST00000511843 Q6ZQY7 126 aa7.34□□□□□ -1.23
RNF4-215ENST00000511843 hADV29S1A0JD25 119 aa7.33□□□□□ -1.24
RNF4-215ENST00000511843 VAMP8Q9BV40 100 aa7.33□□□□□ -1.24
RNF4-215ENST00000511843 KRTAP4-1Q9BYQ7 146 aa7.33□□□□□ -1.24
RNF4-215ENST00000511843 CD164Q04900 197 aa7.32□□□□□ -1.24
RNF4-215ENST00000511843 ASB16-AS1Q495Z4 193 aa7.32□□□□□ -1.24
RNF4-215ENST00000511843 XP32Q5T750 250 aa7.32□□□□□ -1.24
RNF4-215ENST00000511843 C2orf91Q6ZV80 131 aa7.32□□□□□ -1.24
RNF4-215ENST00000511843 C9orf92A6NGG3 77 aa7.31□□□□□ -1.24
RNF4-215ENST00000511843 CFC1BP0CG36 223 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms