RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 SRSF9Q13242 221 aaKnown RBP eCLIP3.36□□□□□ -1.87
PROM1-211ENST00000511153 MUSTN1Q8IVN3 82 aa3.36□□□□□ -1.87
PROM1-211ENST00000511153 LINC00308Q8TCZ7 52 aa3.36□□□□□ -1.87
PROM1-211ENST00000511153 LINC00474Q9P2X8 69 aa3.36□□□□□ -1.87
PROM1-211ENST00000511153 HNRNPA3P51991 378 aaKnown RBP3.35□□□□□ -1.87
PROM1-211ENST00000511153 COX17Q14061 63 aa3.35□□□□□ -1.87
PROM1-211ENST00000511153 C1orf137Q5JT78 98 aa3.35□□□□□ -1.87
PROM1-211ENST00000511153 SLC25A34Q6PIV7 304 aa3.35□□□□□ -1.87
PROM1-211ENST00000511153 SFTA2Q6UW10 78 aa3.35□□□□□ -1.87
PROM1-211ENST00000511153 C2orf91Q6ZV80 131 aa3.35□□□□□ -1.87
PROM1-211ENST00000511153 MRPL55Q7Z7F7 128 aaKnown RBP3.35□□□□□ -1.87
PROM1-211ENST00000511153 HIST1H4GQ99525 98 aa3.35□□□□□ -1.87
PROM1-211ENST00000511153 PSORS1C2Q9UIG4 136 aa3.35□□□□□ -1.87
PROM1-211ENST00000511153 PKIGQ9Y2B9 76 aa3.35□□□□□ -1.87
PROM1-211ENST00000511153 TRBV10-3A0A0K0K1G6 114 aa3.34□□□□□ -1.87
PROM1-211ENST00000511153 EPM2AB3EWF7 344 aa3.34□□□□□ -1.87
PROM1-211ENST00000511153 OR13C6PQ8NH95 151 aa3.34□□□□□ -1.87
PROM1-211ENST00000511153 PKHD1L1Q86WI1 4243 aa3.34□□□□□ -1.87
PROM1-211ENST00000511153 FLG2Q5D862 2391 aaPredicted RBP3.34□□□□□ -1.88
PROM1-211ENST00000511153 H7C2G1 150 aa3.34□□□□□ -1.88
PROM1-211ENST00000511153 TIMM17BO60830 172 aa3.34□□□□□ -1.88
PROM1-211ENST00000511153 RPL24P83731 157 aaKnown RBP3.34□□□□□ -1.88
PROM1-211ENST00000511153 SPANXDQ9BXN6 97 aa3.34□□□□□ -1.88
PROM1-211ENST00000511153 SPANXCQ9NY87 97 aa3.34□□□□□ -1.88
PROM1-211ENST00000511153 A6NDN8 102 aa3.33□□□□□ -1.88
PROM1-211ENST00000511153 M0R378 163 aa3.33□□□□□ -1.88
PROM1-211ENST00000511153 PRLHP81277 87 aa3.33□□□□□ -1.88
PROM1-211ENST00000511153 S100A7L2Q5SY68 101 aa3.33□□□□□ -1.88
PROM1-211ENST00000511153 SRRM2Q9UQ35 2752 aaKnown RBP3.33□□□□□ -1.88
PROM1-211ENST00000511153 IGLV5-37A0A075B6J1 123 aa3.32□□□□□ -1.88
PROM1-211ENST00000511153 DDTP30046 118 aa3.32□□□□□ -1.88
PROM1-211ENST00000511153 FAM19A1Q7Z5A9 133 aa3.32□□□□□ -1.88
PROM1-211ENST00000511153 LINC00337Q8N6G1 96 aa3.32□□□□□ -1.88
PROM1-211ENST00000511153 UQCR10Q9UDW1 63 aa3.32□□□□□ -1.88
PROM1-211ENST00000511153 IGLV1-50A0A075B6I6 118 aa3.31□□□□□ -1.88
PROM1-211ENST00000511153 K7ERJ3 54 aa3.31□□□□□ -1.88
PROM1-211ENST00000511153 UBE2AP49459 152 aa3.31□□□□□ -1.88
PROM1-211ENST00000511153 KRTAP10-4P60372 401 aaPredicted RBP3.31□□□□□ -1.88
PROM1-211ENST00000511153 Q75L30 129 aa3.31□□□□□ -1.88
PROM1-211ENST00000511153 SPANXB1Q9NS25 103 aaPredicted RBP3.31□□□□□ -1.88
PROM1-211ENST00000511153 LRP1Q07954 4544 aaKnown RBP3.31□□□□□ -1.88
PROM1-211ENST00000511153 TSTD3H0UI37 97 aa3.3□□□□□ -1.88
PROM1-211ENST00000511153 DLEU1O43261 78 aa3.3□□□□□ -1.88
PROM1-211ENST00000511153 INAFM2P0DMQ5 153 aa3.3□□□□□ -1.88
PROM1-211ENST00000511153 HINT1P49773 126 aaPredicted RBP3.3□□□□□ -1.88
PROM1-211ENST00000511153 FXYD2P54710 66 aa3.3□□□□□ -1.88
PROM1-211ENST00000511153 BATFQ16520 125 aa3.3□□□□□ -1.88
PROM1-211ENST00000511153 REG3GQ6UW15 175 aa3.3□□□□□ -1.88
PROM1-211ENST00000511153 TMEM126AQ9H061 195 aa3.3□□□□□ -1.88
PROM1-211ENST00000511153 ANAPC11Q9NYG5 84 aa3.3□□□□□ -1.88
PROM1-211ENST00000511153 TRAV23DV6A0A075B6W5 121 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 ETDCA0A1B0GVM5 59 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 BCE1O60756 84 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 IGLV7-43P04211 117 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 IFITM1P13164 125 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 RPL13AP40429 203 aaKnown RBP3.29□□□□□ -1.88
PROM1-211ENST00000511153 SEC61GP60059 68 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 CEND1Q8N111 149 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 HIGD2AQ9BW72 106 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 NHP2Q9NX24 153 aaKnown RBP3.29□□□□□ -1.88
PROM1-211ENST00000511153 FAT3Q8TDW7 4589 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 HERC1Q15751 4861 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 LOC107984156A0A0G2JMH3 177 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 NDUFC2O95298 119 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 CFC1BP0CG36 223 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 CFC1P0CG37 223 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 C6orf99Q4VX62 202 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 ARL17AQ8IVW1 177 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 RAB37Q96AX2 223 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 NAA38Q9BRA0 125 aaKnown RBP3.29□□□□□ -1.88
PROM1-211ENST00000511153 HIGD1BQ9P298 99 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 MYCBP2O75592 4640 aa3.29□□□□□ -1.88
PROM1-211ENST00000511153 ERC2-IT1O76042 136 aa3.28□□□□□ -1.88
PROM1-211ENST00000511153 IGLV6-57P01721 117 aa3.28□□□□□ -1.88
PROM1-211ENST00000511153 SEC61BP60468 96 aaKnown RBP3.28□□□□□ -1.88
PROM1-211ENST00000511153 HSD52Q0P140 79 aa3.28□□□□□ -1.88
PROM1-211ENST00000511153 Q1RN00 199 aa3.28□□□□□ -1.88
PROM1-211ENST00000511153 Q6ZVH6 145 aa3.28□□□□□ -1.88
PROM1-211ENST00000511153 SMIM11BQ8TCY0 68 aa3.28□□□□□ -1.88
PROM1-211ENST00000511153 PPDPFQ9H3Y8 114 aa3.28□□□□□ -1.88
PROM1-211ENST00000511153 TRBV10-2A0A0K0K1G8 114 aa3.27□□□□□ -1.89
PROM1-211ENST00000511153 ZNF73O43830 326 aaPredicted RBP3.27□□□□□ -1.89
PROM1-211ENST00000511153 BVES-AS1Q5T3Y7 98 aa3.27□□□□□ -1.89
PROM1-211ENST00000511153 ST20-AS1Q8NBB2 130 aa3.27□□□□□ -1.89
PROM1-211ENST00000511153 SMCR5Q8TEV8 140 aa3.27□□□□□ -1.89
PROM1-211ENST00000511153 COPS9Q8WXC6 57 aa3.27□□□□□ -1.89
PROM1-211ENST00000511153 KCNQ1DNQ9H478 68 aa3.27□□□□□ -1.89
PROM1-211ENST00000511153 TRAV13-2A0A0B4J235 113 aa3.26□□□□□ -1.89
PROM1-211ENST00000511153 A0A1B0GV90 55 aa3.26□□□□□ -1.89
PROM1-211ENST00000511153 DEFB105AQ8NG35 78 aa3.26□□□□□ -1.89
PROM1-211ENST00000511153 DIRC1Q969H9 104 aa3.26□□□□□ -1.89
PROM1-211ENST00000511153 Q9BRP9 147 aa3.26□□□□□ -1.89
PROM1-211ENST00000511153 ZNF861PO60384 105 aa3.25□□□□□ -1.89
PROM1-211ENST00000511153 COX7BP24311 80 aa3.25□□□□□ -1.89
PROM1-211ENST00000511153 RPL28P46779 137 aaKnown RBP3.25□□□□□ -1.89
PROM1-211ENST00000511153 TAL2Q16559 108 aa3.25□□□□□ -1.89
PROM1-211ENST00000511153 KRTAP13-1Q8IUC0 172 aa3.25□□□□□ -1.89
PROM1-211ENST00000511153 KRTAP4-16G5E9R7 235 aaPredicted RBP3.25□□□□□ -1.89
PROM1-211ENST00000511153 H0Y9J4 135 aa3.25□□□□□ -1.89
PROM1-211ENST00000511153 SPRR1AP35321 89 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms