RNA–Protein interactions for RNA: ENST00000510500.5

CAST-232, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-232ENST00000510500 SMIM11BQ8TCY0 68 aa5.04□□□□□ -1.6
CAST-232ENST00000510500 DIDO1Q9BTC0 2240 aaKnown RBP5.03□□□□□ -1.6
CAST-232ENST00000510500 IGLV11-55A0A075B6I3 123 aa5.03□□□□□ -1.6
CAST-232ENST00000510500 IGHV1-3A0A0C4DH29 117 aa5.03□□□□□ -1.6
CAST-232ENST00000510500 NTM-AS1Q6ZSK4 140 aa5.03□□□□□ -1.6
CAST-232ENST00000510500 KCNQ1DNQ9H478 68 aa5.03□□□□□ -1.6
CAST-232ENST00000510500 AKAP9Q99996 3911 aa5.02□□□□□ -1.61
CAST-232ENST00000510500 IGLV4-60A0A075B6I1 120 aa5.02□□□□□ -1.61
CAST-232ENST00000510500 IGHV3-64A0A075B6Q5 118 aa5.02□□□□□ -1.61
CAST-232ENST00000510500 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.02□□□□□ -1.61
CAST-232ENST00000510500 TLX1NBP0CAT3 122 aa5.02□□□□□ -1.61
CAST-232ENST00000510500 DNAH10OSP0CZ25 163 aa5.02□□□□□ -1.61
CAST-232ENST00000510500 ERHP84090 104 aaKnown RBP5.02□□□□□ -1.61
CAST-232ENST00000510500 KRTAP25-1Q3LHN0 102 aa5.02□□□□□ -1.61
CAST-232ENST00000510500 C9orf47Q6ZRZ4 202 aa5.02□□□□□ -1.61
CAST-232ENST00000510500 GAFA1Q96PS6 74 aa5.02□□□□□ -1.61
CAST-232ENST00000510500 CR1P17927 2039 aa5.02□□□□□ -1.61
CAST-232ENST00000510500 SDK2Q58EX2 2172 aa5.02□□□□□ -1.61
CAST-232ENST00000510500 TRGV2A0A075B6R0 118 aa5.02□□□□□ -1.61
CAST-232ENST00000510500 PROK1P58294 105 aa5.01□□□□□ -1.61
CAST-232ENST00000510500 SPATA8Q6RVD6 105 aa5.01□□□□□ -1.61
CAST-232ENST00000510500 TNCP24821 2201 aa5.01□□□□□ -1.61
CAST-232ENST00000510500 UNC13CQ8NB66 2214 aa5.01□□□□□ -1.61
CAST-232ENST00000510500 COL27A1Q8IZC6 1860 aaPredicted RBP5□□□□□ -1.61
CAST-232ENST00000510500 STATHP02808 62 aa5□□□□□ -1.61
CAST-232ENST00000510500 C1orf137Q5JT78 98 aa5□□□□□ -1.61
CAST-232ENST00000510500 IGFL4Q6B9Z1 124 aa5□□□□□ -1.61
CAST-232ENST00000510500 SMIM29Q86T20 159 aa5□□□□□ -1.61
CAST-232ENST00000510500 COA5Q86WW8 74 aa5□□□□□ -1.61
CAST-232ENST00000510500 RPL39LQ96EH5 51 aaKnown RBP5□□□□□ -1.61
CAST-232ENST00000510500 IGKV3D-11A0A0A0MRZ8 115 aa4.99□□□□□ -1.61
CAST-232ENST00000510500 RPL39P62891 51 aaKnown RBP4.99□□□□□ -1.61
CAST-232ENST00000510500 H3BRN7 92 aa4.98□□□□□ -1.61
CAST-232ENST00000510500 DEFB113Q30KQ7 82 aa4.98□□□□□ -1.61
CAST-232ENST00000510500 KRTAP26-1Q6PEX3 210 aa4.98□□□□□ -1.61
CAST-232ENST00000510500 SPRR4Q96PI1 79 aa4.98□□□□□ -1.61
CAST-232ENST00000510500 PRRC2CQ9Y520 2896 aaKnown RBP4.98□□□□□ -1.61
CAST-232ENST00000510500 NBEAL1Q6ZS30 2694 aa4.98□□□□□ -1.61
CAST-232ENST00000510500 LINC00959A0A1B0GUT2 108 aa4.97□□□□□ -1.61
CAST-232ENST00000510500 A0A1W2PNU3 283 aaPredicted RBP4.97□□□□□ -1.61
CAST-232ENST00000510500 IGKV3-20P01619 116 aa4.97□□□□□ -1.61
CAST-232ENST00000510500 SLPIP03973 132 aa4.97□□□□□ -1.61
CAST-232ENST00000510500 TACC2O95359 2948 aa4.96□□□□□ -1.62
CAST-232ENST00000510500 IGKV2-28A0A075B6P5 120 aa4.96□□□□□ -1.62
CAST-232ENST00000510500 IGHV3-64DA0A0J9YX35 117 aa4.96□□□□□ -1.62
CAST-232ENST00000510500 INSP01308 110 aa4.96□□□□□ -1.62
CAST-232ENST00000510500 IGKV2D-28P01615 120 aa4.96□□□□□ -1.62
CAST-232ENST00000510500 LYZP61626 148 aa4.96□□□□□ -1.62
CAST-232ENST00000510500 LINC00612Q8N6U2 182 aa4.96□□□□□ -1.62
CAST-232ENST00000510500 RP1P56715 2156 aa4.96□□□□□ -1.62
CAST-232ENST00000510500 FN1P02751 2386 aaKnown RBP4.96□□□□□ -1.62
CAST-232ENST00000510500 TRGV4A0A0C4DH28 118 aa4.95□□□□□ -1.62
CAST-232ENST00000510500 A8MUU9 505 aa4.95□□□□□ -1.62
CAST-232ENST00000510500 CCL18P55774 89 aa4.95□□□□□ -1.62
CAST-232ENST00000510500 DEFB112Q30KQ8 113 aa4.95□□□□□ -1.62
CAST-232ENST00000510500 DMAC1Q96GE9 116 aa4.95□□□□□ -1.62
CAST-232ENST00000510500 CSMD2Q7Z408 3487 aa4.95□□□□□ -1.62
CAST-232ENST00000510500 ATRQ13535 2644 aa4.95□□□□□ -1.62
CAST-232ENST00000510500 ODF3BA8MYP8 253 aa4.95□□□□□ -1.62
CAST-232ENST00000510500 MGPP08493 103 aa4.95□□□□□ -1.62
CAST-232ENST00000510500 DEFB134Q4QY38 66 aa4.95□□□□□ -1.62
CAST-232ENST00000510500 COX14Q96I36 57 aa4.95□□□□□ -1.62
CAST-232ENST00000510500 USF3Q68DE3 2245 aa4.94□□□□□ -1.62
CAST-232ENST00000510500 SPINK14Q6IE38 97 aa4.94□□□□□ -1.62
CAST-232ENST00000510500 STAB1Q9NY15 2570 aa4.94□□□□□ -1.62
CAST-232ENST00000510500 ALPK2Q86TB3 2170 aa4.93□□□□□ -1.62
CAST-232ENST00000510500 IGLV7-46A0A075B6I9 117 aa4.93□□□□□ -1.62
CAST-232ENST00000510500 M0R2N4 97 aa4.93□□□□□ -1.62
CAST-232ENST00000510500 NDUFAF8A1L188 74 aa4.93□□□□□ -1.62
CAST-232ENST00000510500 KRTAP9-7A8MTY7 169 aa4.93□□□□□ -1.62
CAST-232ENST00000510500 UQCR11O14957 56 aa4.93□□□□□ -1.62
CAST-232ENST00000510500 ZNF861PO60384 105 aa4.93□□□□□ -1.62
CAST-232ENST00000510500 CSPG4Q6UVK1 2322 aa4.92□□□□□ -1.62
CAST-232ENST00000510500 RTTNQ86VV8 2226 aa4.92□□□□□ -1.62
CAST-232ENST00000510500 C9orf163Q8N9P6 203 aa4.92□□□□□ -1.62
CAST-232ENST00000510500 DEFB126Q9BYW3 111 aa4.92□□□□□ -1.62
CAST-232ENST00000510500 IGKV2-40A0A087WW87 121 aaPredicted RBP4.91□□□□□ -1.62
CAST-232ENST00000510500 TRBV6-4A0A1B0GX49 114 aa4.91□□□□□ -1.62
CAST-232ENST00000510500 NUPR2A6NF83 97 aa4.91□□□□□ -1.62
CAST-232ENST00000510500 IGKV2D-40P01614 121 aaPredicted RBP4.91□□□□□ -1.62
CAST-232ENST00000510500 U3KQA8 63 aa4.91□□□□□ -1.62
CAST-232ENST00000510500 JMJD1CQ15652 2540 aa4.91□□□□□ -1.62
CAST-232ENST00000510500 COL6A5A8TX70 2615 aa4.91□□□□□ -1.62
CAST-232ENST00000510500 PKDREJQ9NTG1 2253 aa4.91□□□□□ -1.62
CAST-232ENST00000510500 COX7BP24311 80 aa4.9□□□□□ -1.62
CAST-232ENST00000510500 LINC00315P59091 139 aa4.9□□□□□ -1.62
CAST-232ENST00000510500 ZNRD1Q9P1U0 126 aa4.9□□□□□ -1.62
CAST-232ENST00000510500 MALRD1Q5VYJ5 2156 aa4.9□□□□□ -1.62
CAST-232ENST00000510500 IGKV3-7A0A075B6H7 116 aa4.9□□□□□ -1.63
CAST-232ENST00000510500 DCHS2Q6V1P9 2916 aa4.89□□□□□ -1.63
CAST-232ENST00000510500 RNASE3P12724 160 aaKnown RBP4.89□□□□□ -1.63
CAST-232ENST00000510500 ST20-AS1Q8NBB2 130 aa4.89□□□□□ -1.63
CAST-232ENST00000510500 FBN1P35555 2871 aaKnown RBP4.89□□□□□ -1.63
CAST-232ENST00000510500 NSD1Q96L73 2696 aaPredicted RBP4.88□□□□□ -1.63
CAST-232ENST00000510500 CADP27708 2225 aa4.88□□□□□ -1.63
CAST-232ENST00000510500 CCL3L1P16619 93 aa4.88□□□□□ -1.63
CAST-232ENST00000510500 LINC00158P58513 81 aa4.88□□□□□ -1.63
CAST-232ENST00000510500 Q8N1X5 172 aa4.88□□□□□ -1.63
CAST-232ENST00000510500 TMEM167AQ8TBQ9 72 aa4.88□□□□□ -1.63
CAST-232ENST00000510500 ACANP16112 2415 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms