RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 LAMTOR3Q9UHA4 124 aa10.57□□□□□ -0.72
SQSTM1-213ENST00000510187 M0R378 163 aa10.56□□□□□ -0.72
SQSTM1-213ENST00000510187 CRYGAP11844 174 aa10.56□□□□□ -0.72
SQSTM1-213ENST00000510187 COX7BP24311 80 aa10.56□□□□□ -0.72
SQSTM1-213ENST00000510187 ELOF1P60002 83 aaKnown RBP10.56□□□□□ -0.72
SQSTM1-213ENST00000510187 HIGD2BQ4VC39 106 aa10.56□□□□□ -0.72
SQSTM1-213ENST00000510187 Q6ZQY7 126 aa10.56□□□□□ -0.72
SQSTM1-213ENST00000510187 C15orf56Q8N910 161 aa10.56□□□□□ -0.72
SQSTM1-213ENST00000510187 NDUFC2-KCTD14E9PQ53 114 aa10.55□□□□□ -0.72
SQSTM1-213ENST00000510187 TENM2Q9NT68 2774 aa10.55□□□□□ -0.72
SQSTM1-213ENST00000510187 USP17L23D6RBM5 183 aa10.55□□□□□ -0.72
SQSTM1-213ENST00000510187 SERP2Q8N6R1 65 aa10.55□□□□□ -0.72
SQSTM1-213ENST00000510187 Q6ZRU5 148 aa10.54□□□□□ -0.72
SQSTM1-213ENST00000510187 DSCR8Q96T75 97 aa10.54□□□□□ -0.72
SQSTM1-213ENST00000510187 C1orf43Q9BWL3 253 aa10.54□□□□□ -0.72
SQSTM1-213ENST00000510187 A0A087WVE0 104 aa10.53□□□□□ -0.72
SQSTM1-213ENST00000510187 TRBV7-4A0A0J9YYF1 115 aa10.48□□□□□ -0.73
SQSTM1-213ENST00000510187 BCE1O60756 84 aa10.47□□□□□ -0.73
SQSTM1-213ENST00000510187 LINC00528Q8N1L1 170 aa10.47□□□□□ -0.73
SQSTM1-213ENST00000510187 KRTAP1-5Q9BYS1 174 aa10.47□□□□□ -0.73
SQSTM1-213ENST00000510187 LY6G6CO95867 125 aa10.47□□□□□ -0.73
SQSTM1-213ENST00000510187 SYCNQ0VAF6 134 aa10.47□□□□□ -0.73
SQSTM1-213ENST00000510187 IGKV2D-24A0A075B6R9 120 aa10.46□□□□□ -0.74
SQSTM1-213ENST00000510187 SMIM20Q8N5G0 67 aa10.46□□□□□ -0.74
SQSTM1-213ENST00000510187 NBDYA0A0U1RRE5 68 aa10.45□□□□□ -0.74
SQSTM1-213ENST00000510187 Q6ZVQ6 151 aa10.45□□□□□ -0.74
SQSTM1-213ENST00000510187 FAM19A1Q7Z5A9 133 aa10.45□□□□□ -0.74
SQSTM1-213ENST00000510187 LINC00476Q8WZB0 136 aa10.45□□□□□ -0.74
SQSTM1-213ENST00000510187 CXCL6P80162 114 aa10.44□□□□□ -0.74
SQSTM1-213ENST00000510187 Q6ZRP5 223 aa10.44□□□□□ -0.74
SQSTM1-213ENST00000510187 TLX1NBP0CAT3 122 aa10.44□□□□□ -0.74
SQSTM1-213ENST00000510187 LINC01547P58512 204 aaPredicted RBP10.44□□□□□ -0.74
SQSTM1-213ENST00000510187 DNAH1Q9P2D7 4330 aa10.43□□□□□ -0.74
SQSTM1-213ENST00000510187 M0R2N4 97 aa10.43□□□□□ -0.74
SQSTM1-213ENST00000510187 RMI2Q96E14 147 aa10.42□□□□□ -0.74
SQSTM1-213ENST00000510187 PLA2G2DQ9UNK4 145 aa10.42□□□□□ -0.74
SQSTM1-213ENST00000510187 KCNQ1DNQ9H478 68 aa10.41□□□□□ -0.74
SQSTM1-213ENST00000510187 TMEM258P61165 79 aa10.41□□□□□ -0.74
SQSTM1-213ENST00000510187 VPS13DQ5THJ4 4388 aa10.41□□□□□ -0.74
SQSTM1-213ENST00000510187 NKAPP1Q8N9T2 125 aa10.4□□□□□ -0.74
SQSTM1-213ENST00000510187 SVIPQ8NHG7 77 aa10.38□□□□□ -0.75
SQSTM1-213ENST00000510187 IGLV5-37A0A075B6J1 123 aa10.38□□□□□ -0.75
SQSTM1-213ENST00000510187 HAMPP81172 84 aa10.38□□□□□ -0.75
SQSTM1-213ENST00000510187 Q6ZR54 194 aa10.36□□□□□ -0.75
SQSTM1-213ENST00000510187 C7orf33Q8WU49 177 aa10.36□□□□□ -0.75
SQSTM1-213ENST00000510187 KMT2AQ03164 3969 aa10.35□□□□□ -0.75
SQSTM1-213ENST00000510187 J3KT08 172 aa10.35□□□□□ -0.75
SQSTM1-213ENST00000510187 PSCAO43653 123 aa10.35□□□□□ -0.75
SQSTM1-213ENST00000510187 RPS28P62857 69 aaKnown RBP10.35□□□□□ -0.75
SQSTM1-213ENST00000510187 SERTAD4-AS1Q5TG53 156 aa10.35□□□□□ -0.75
SQSTM1-213ENST00000510187 CYSTM1Q9H1C7 97 aa10.35□□□□□ -0.75
SQSTM1-213ENST00000510187 TRAV7A0A075B6U4 112 aa10.34□□□□□ -0.75
SQSTM1-213ENST00000510187 PRYO14603 147 aa10.34□□□□□ -0.75
SQSTM1-213ENST00000510187 DHRS4-AS1Q9P1J3 65 aa10.33□□□□□ -0.76
SQSTM1-213ENST00000510187 ALMS1Q8TCU4 4167 aa10.33□□□□□ -0.76
SQSTM1-213ENST00000510187 LOC107984640A0A0U1RRK4 108 aa10.31□□□□□ -0.76
SQSTM1-213ENST00000510187 Q6ZRN7 208 aaPredicted RBP10.3□□□□□ -0.76
SQSTM1-213ENST00000510187 A0A1B0GW54 56 aa10.3□□□□□ -0.76
SQSTM1-213ENST00000510187 SPRR1AP35321 89 aa10.3□□□□□ -0.76
SQSTM1-213ENST00000510187 Q6ZRX8 168 aa10.3□□□□□ -0.76
SQSTM1-213ENST00000510187 IGLV1-50A0A075B6I6 118 aa10.29□□□□□ -0.76
SQSTM1-213ENST00000510187 IGLV5-48A0A075B6I7 105 aa10.29□□□□□ -0.76
SQSTM1-213ENST00000510187 KRTAP4-16G5E9R7 235 aaPredicted RBP10.29□□□□□ -0.76
SQSTM1-213ENST00000510187 C1orf134Q5TEV5 83 aa10.29□□□□□ -0.76
SQSTM1-213ENST00000510187 LCE6AA0A183 80 aa10.28□□□□□ -0.76
SQSTM1-213ENST00000510187 Q8N377 158 aa10.28□□□□□ -0.76
SQSTM1-213ENST00000510187 DNAH10Q8IVF4 4471 aa10.26□□□□□ -0.77
SQSTM1-213ENST00000510187 ETDCA0A1B0GVM5 59 aa10.26□□□□□ -0.77
SQSTM1-213ENST00000510187 C20orf197Q8N268 126 aa10.25□□□□□ -0.77
SQSTM1-213ENST00000510187 DPH3Q96FX2 82 aa10.25□□□□□ -0.77
SQSTM1-213ENST00000510187 DNAH6Q9C0G6 4158 aa10.24□□□□□ -0.77
SQSTM1-213ENST00000510187 NREPQ16612 68 aa10.24□□□□□ -0.77
SQSTM1-213ENST00000510187 LRCOL1A6NCL2 159 aa10.23□□□□□ -0.77
SQSTM1-213ENST00000510187 KLKP1Q107X0 134 aa10.23□□□□□ -0.77
SQSTM1-213ENST00000510187 Q9BRP9 147 aa10.23□□□□□ -0.77
SQSTM1-213ENST00000510187 SCXQ7RTU7 201 aa10.22□□□□□ -0.77
SQSTM1-213ENST00000510187 MRPL55Q7Z7F7 128 aaKnown RBP10.22□□□□□ -0.77
SQSTM1-213ENST00000510187 DEFB105AQ8NG35 78 aa10.22□□□□□ -0.77
SQSTM1-213ENST00000510187 FAM168BA1KXE4 195 aa10.21□□□□□ -0.77
SQSTM1-213ENST00000510187 RPL37AP8A6NKH3 93 aa10.21□□□□□ -0.77
SQSTM1-213ENST00000510187 TNP2Q05952 138 aa10.21□□□□□ -0.77
SQSTM1-213ENST00000510187 C14orf177Q52M58 125 aa10.21□□□□□ -0.77
SQSTM1-213ENST00000510187 KRTAP7-1Q8IUC3 87 aa10.21□□□□□ -0.77
SQSTM1-213ENST00000510187 FUSP35637 526 aaKnown RBP eCLIP10.21□□□□□ -0.784e-7■■■□□ 15.3
SQSTM1-213ENST00000510187 DNAH2Q9P225 4427 aa10.19□□□□□ -0.78
SQSTM1-213ENST00000510187 HYDINQ4G0P3 5121 aa10.19□□□□□ -0.78
SQSTM1-213ENST00000510187 IGKV4-1P06312 121 aa10.19□□□□□ -0.78
SQSTM1-213ENST00000510187 SACSQ9NZJ4 4579 aa10.19□□□□□ -0.78
SQSTM1-213ENST00000510187 A0A087WTM6 91 aa10.19□□□□□ -0.78
SQSTM1-213ENST00000510187 BPY2O14599 106 aa10.19□□□□□ -0.78
SQSTM1-213ENST00000510187 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.18□□□□□ -0.78
SQSTM1-213ENST00000510187 RTL8CO15255 209 aa10.18□□□□□ -0.78
SQSTM1-213ENST00000510187 ERC2-IT1O76042 136 aa10.18□□□□□ -0.78
SQSTM1-213ENST00000510187 H7BZZ5 65 aa10.17□□□□□ -0.78
SQSTM1-213ENST00000510187 FAM19A5Q7Z5A7 132 aaPredicted RBP10.17□□□□□ -0.78
SQSTM1-213ENST00000510187 FAM236DA0A1B0GTK5 79 aa10.16□□□□□ -0.78
SQSTM1-213ENST00000510187 FAM236CP0DP71 79 aa10.16□□□□□ -0.78
SQSTM1-213ENST00000510187 NDUFC1O43677 76 aa10.16□□□□□ -0.78
SQSTM1-213ENST00000510187 C1orf137Q5JT78 98 aa10.16□□□□□ -0.78
SQSTM1-213ENST00000510187 REG3GQ6UW15 175 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms