RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 HINT1P49773 126 aaPredicted RBP9.11□□□□□ -0.95
RNF4-213ENST00000509388 INAFM2P0DMQ5 153 aa9.1□□□□□ -0.95
RNF4-213ENST00000509388 SPINK6Q6UWN8 80 aa9.1□□□□□ -0.95
RNF4-213ENST00000509388 RAB37Q96AX2 223 aa9.1□□□□□ -0.95
RNF4-213ENST00000509388 ZNF73O43830 326 aaPredicted RBP9.09□□□□□ -0.95
RNF4-213ENST00000509388 ZNF861PO60384 105 aa9.09□□□□□ -0.95
RNF4-213ENST00000509388 KRTAP4-5Q9BYR2 181 aa9.09□□□□□ -0.95
RNF4-213ENST00000509388 SPRR1AP35321 89 aa9.07□□□□□ -0.96
RNF4-213ENST00000509388 PRLHP81277 87 aa9.07□□□□□ -0.96
RNF4-213ENST00000509388 DIRC1Q969H9 104 aa9.07□□□□□ -0.96
RNF4-213ENST00000509388 CFC1BP0CG36 223 aa9.06□□□□□ -0.96
RNF4-213ENST00000509388 CFC1P0CG37 223 aa9.06□□□□□ -0.96
RNF4-213ENST00000509388 FXYD2P54710 66 aa9.06□□□□□ -0.96
RNF4-213ENST00000509388 VPS13BQ7Z7G8 4022 aa9.06□□□□□ -0.96
RNF4-213ENST00000509388 RPL13AP40429 203 aaKnown RBP9.05□□□□□ -0.96
RNF4-213ENST00000509388 CTAG1AP78358 180 aa9.05□□□□□ -0.96
RNF4-213ENST00000509388 A0A0B4J2C4 111 aa9.04□□□□□ -0.96
RNF4-213ENST00000509388 C6orf99Q4VX62 202 aa9.04□□□□□ -0.96
RNF4-213ENST00000509388 HIGD2AQ9BW72 106 aa9.04□□□□□ -0.96
RNF4-213ENST00000509388 H0Y9J4 135 aa9.03□□□□□ -0.96
RNF4-213ENST00000509388 H7C2G1 150 aa9.03□□□□□ -0.96
RNF4-213ENST00000509388 M0R143 59 aa9.03□□□□□ -0.96
RNF4-213ENST00000509388 SMIM11BQ8TCY0 68 aa9.03□□□□□ -0.96
RNF4-213ENST00000509388 NHP2Q9NX24 153 aaKnown RBP9.03□□□□□ -0.96
RNF4-213ENST00000509388 B5MCH6 92 aa9.02□□□□□ -0.97
RNF4-213ENST00000509388 KRTAP4-16G5E9R7 235 aaPredicted RBP9.02□□□□□ -0.97
RNF4-213ENST00000509388 VAMP3Q15836 100 aa9.02□□□□□ -0.97
RNF4-213ENST00000509388 Q1RN00 199 aa9.02□□□□□ -0.97
RNF4-213ENST00000509388 PRO1854Q9UHT4 67 aa9.02□□□□□ -0.97
RNF4-213ENST00000509388 COX7BP24311 80 aa9.01□□□□□ -0.97
RNF4-213ENST00000509388 BVES-AS1Q5T3Y7 98 aa9.01□□□□□ -0.97
RNF4-213ENST00000509388 Q6ZRX8 168 aa9.01□□□□□ -0.97
RNF4-213ENST00000509388 KRTAP13-1Q8IUC0 172 aa9.01□□□□□ -0.97
RNF4-213ENST00000509388 SRRM2Q9UQ35 2752 aaKnown RBP9□□□□□ -0.97
RNF4-213ENST00000509388 TRBV7-6A0A0J9YX20 115 aa8.99□□□□□ -0.97
RNF4-213ENST00000509388 A0A1B0GWB2 263 aa8.99□□□□□ -0.97
RNF4-213ENST00000509388 SMCR5Q8TEV8 140 aa8.99□□□□□ -0.97
RNF4-213ENST00000509388 PCLOQ9Y6V0 5065 aa8.98□□□□□ -0.97
RNF4-213ENST00000509388 K7ERJ3 54 aa8.97□□□□□ -0.97
RNF4-213ENST00000509388 ELOF1P60002 83 aaKnown RBP8.97□□□□□ -0.97
RNF4-213ENST00000509388 DHRS4-AS1Q9P1J3 65 aa8.97□□□□□ -0.97
RNF4-213ENST00000509388 ABCA13Q86UQ4 5058 aa8.96□□□□□ -0.97
RNF4-213ENST00000509388 ZNF706Q9Y5V0 76 aaPredicted RBP8.96□□□□□ -0.98
RNF4-213ENST00000509388 SLC25A20O43772 301 aa8.95□□□□□ -0.98
RNF4-213ENST00000509388 BATFQ16520 125 aa8.94□□□□□ -0.98
RNF4-213ENST00000509388 Q9BRP9 147 aa8.94□□□□□ -0.98
RNF4-213ENST00000509388 PSMB2P49721 201 aa8.93□□□□□ -0.98
RNF4-213ENST00000509388 OXTP01178 125 aa8.92□□□□□ -0.98
RNF4-213ENST00000509388 H0YGX0 51 aa8.91□□□□□ -0.98
RNF4-213ENST00000509388 ERC2-IT1O76042 136 aa8.91□□□□□ -0.98
RNF4-213ENST00000509388 SNCGO76070 127 aa8.91□□□□□ -0.98
RNF4-213ENST00000509388 PKHD1L1Q86WI1 4243 aa8.91□□□□□ -0.98
RNF4-213ENST00000509388 COX6CP09669 75 aa8.9□□□□□ -0.98
RNF4-213ENST00000509388 SPRR4Q96PI1 79 aa8.9□□□□□ -0.98
RNF4-213ENST00000509388 TSPAN13O95857 204 aa8.89□□□□□ -0.99
RNF4-213ENST00000509388 GAGE2AQ6NT46 116 aa8.89□□□□□ -0.99
RNF4-213ENST00000509388 LINC00575Q6W349 94 aa8.89□□□□□ -0.99
RNF4-213ENST00000509388 LINC01600Q96MT4 127 aa8.89□□□□□ -0.99
RNF4-213ENST00000509388 hADV29S1A0JD25 119 aa8.88□□□□□ -0.99
RNF4-213ENST00000509388 PCP4L1A6NKN8 68 aa8.88□□□□□ -0.99
RNF4-213ENST00000509388 KRTAP29-1A8MX34 341 aaPredicted RBP8.88□□□□□ -0.99
RNF4-213ENST00000509388 J3QL48 77 aa8.88□□□□□ -0.99
RNF4-213ENST00000509388 KRTAP1-4P0C5Y4 121 aa8.88□□□□□ -0.99
RNF4-213ENST00000509388 CRYGAP11844 174 aa8.88□□□□□ -0.99
RNF4-213ENST00000509388 ANAPC11Q9NYG5 84 aa8.88□□□□□ -0.99
RNF4-213ENST00000509388 TRIAP1O43715 76 aa8.87□□□□□ -0.99
RNF4-213ENST00000509388 SCGB1C2P0DMR2 95 aa8.87□□□□□ -0.99
RNF4-213ENST00000509388 ST20-AS1Q8NBB2 130 aa8.87□□□□□ -0.99
RNF4-213ENST00000509388 FLG2Q5D862 2391 aaPredicted RBP8.87□□□□□ -0.99
RNF4-213ENST00000509388 FAM229BQ4G0N7 80 aa8.86□□□□□ -0.99
RNF4-213ENST00000509388 PRR26Q8N8Z3 221 aa8.86□□□□□ -0.99
RNF4-213ENST00000509388 DEFB105AQ8NG35 78 aa8.86□□□□□ -0.99
RNF4-213ENST00000509388 TEX49A0A1B0GTD5 131 aa8.82□□□□□ -1
RNF4-213ENST00000509388 LINC00483Q53H64 154 aa8.82□□□□□ -1
RNF4-213ENST00000509388 Q6ZQY7 126 aa8.82□□□□□ -1
RNF4-213ENST00000509388 A0A087X002 238 aa8.81□□□□□ -1
RNF4-213ENST00000509388 A0A1B0GX51 115 aa8.81□□□□□ -1
RNF4-213ENST00000509388 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.81□□□□□ -1
RNF4-213ENST00000509388 TYMSOSQ8TAI1 123 aa8.81□□□□□ -1
RNF4-213ENST00000509388 CLEC2BQ92478 149 aa8.8□□□□□ -1
RNF4-213ENST00000509388 FAM218AQ96MZ4 157 aa8.8□□□□□ -1
RNF4-213ENST00000509388 LAMTOR3Q9UHA4 124 aa8.8□□□□□ -1
RNF4-213ENST00000509388 FAT3Q8TDW7 4589 aa8.79□□□□□ -1
RNF4-213ENST00000509388 DNAL4O96015 105 aa8.79□□□□□ -1
RNF4-213ENST00000509388 GHRHP01286 108 aa8.79□□□□□ -1
RNF4-213ENST00000509388 KRTAP10-8P60410 259 aa8.79□□□□□ -1
RNF4-213ENST00000509388 NAA38Q9BRA0 125 aaKnown RBP8.79□□□□□ -1
RNF4-213ENST00000509388 SNHG12Q9BXW3 62 aa8.79□□□□□ -1
RNF4-213ENST00000509388 IGLV9-49A0A0B4J1Y8 123 aa8.78□□□□□ -1
RNF4-213ENST00000509388 SPRR1BP22528 89 aa8.78□□□□□ -1
RNF4-213ENST00000509388 LYRM7Q5U5X0 104 aa8.78□□□□□ -1
RNF4-213ENST00000509388 LRP1Q07954 4544 aaKnown RBP8.78□□□□□ -1
RNF4-213ENST00000509388 MYCBP2O75592 4640 aa8.77□□□□□ -1.01
RNF4-213ENST00000509388 IGLV5-48A0A075B6I7 105 aa8.77□□□□□ -1.01
RNF4-213ENST00000509388 H3BUT2 72 aa8.77□□□□□ -1.01
RNF4-213ENST00000509388 OCIAD2Q56VL3 154 aa8.77□□□□□ -1.01
RNF4-213ENST00000509388 MT1HL1P0DM35 61 aa8.76□□□□□ -1.01
RNF4-213ENST00000509388 KRTAP13-2Q52LG2 175 aa8.76□□□□□ -1.01
RNF4-213ENST00000509388 COL5A1-AS1Q5SY13 56 aa8.76□□□□□ -1.01
RNF4-213ENST00000509388 C9orf153Q5TBE3 101 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms