RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 PRR26Q8N8Z3 221 aa12.07□□□□□ -0.48
HOXC6-204ENST00000509328 CBY1Q9Y3M2 126 aa12.07□□□□□ -0.48
HOXC6-204ENST00000509328 TRAV23DV6A0A075B6W5 121 aa12.06□□□□□ -0.48
HOXC6-204ENST00000509328 MUSTN1Q8IVN3 82 aa12.06□□□□□ -0.48
HOXC6-204ENST00000509328 HIGD2AQ9BW72 106 aa12.06□□□□□ -0.48
HOXC6-204ENST00000509328 COX8AP10176 69 aa12.05□□□□□ -0.48
HOXC6-204ENST00000509328 OR13C6PQ8NH95 151 aa12.05□□□□□ -0.48
HOXC6-204ENST00000509328 VAMP8Q9BV40 100 aa12.04□□□□□ -0.48
HOXC6-204ENST00000509328 B5MCH6 92 aa12.03□□□□□ -0.48
HOXC6-204ENST00000509328 RPL13AP40429 203 aaKnown RBP12.03□□□□□ -0.48
HOXC6-204ENST00000509328 PAM16Q9Y3D7 125 aa12.03□□□□□ -0.48
HOXC6-204ENST00000509328 DLEU1O43261 78 aa12.02□□□□□ -0.49
HOXC6-204ENST00000509328 SPATA45Q537H7 98 aa12.02□□□□□ -0.49
HOXC6-204ENST00000509328 ZNF73O43830 326 aaPredicted RBP12.01□□□□□ -0.49
HOXC6-204ENST00000509328 CRYGAP11844 174 aa11.99□□□□□ -0.49
HOXC6-204ENST00000509328 Q6ZRX8 168 aa11.99□□□□□ -0.49
HOXC6-204ENST00000509328 FAM229BQ4G0N7 80 aa11.98□□□□□ -0.49
HOXC6-204ENST00000509328 SMCR5Q8TEV8 140 aa11.98□□□□□ -0.49
HOXC6-204ENST00000509328 C14orf144Q96I85 54 aa11.98□□□□□ -0.49
HOXC6-204ENST00000509328 A0A087X002 238 aa11.97□□□□□ -0.49
HOXC6-204ENST00000509328 HINT1P49773 126 aaPredicted RBP11.97□□□□□ -0.49
HOXC6-204ENST00000509328 PYY3Q5JQD4 70 aa11.97□□□□□ -0.49
HOXC6-204ENST00000509328 ANAPC11Q9NYG5 84 aa11.97□□□□□ -0.49
HOXC6-204ENST00000509328 ZNF706Q9Y5V0 76 aaPredicted RBP11.97□□□□□ -0.49
HOXC6-204ENST00000509328 SPRR4Q96PI1 79 aa11.95□□□□□ -0.5
HOXC6-204ENST00000509328 Q9BRP9 147 aa11.95□□□□□ -0.5
HOXC6-204ENST00000509328 TRAV13-2A0A0B4J235 113 aa11.94□□□□□ -0.5
HOXC6-204ENST00000509328 A6NDN8 102 aa11.94□□□□□ -0.5
HOXC6-204ENST00000509328 SLC25A34Q6PIV7 304 aa11.94□□□□□ -0.5
HOXC6-204ENST00000509328 HIST1H4GQ99525 98 aa11.94□□□□□ -0.5
HOXC6-204ENST00000509328 A4D1N5 150 aa11.92□□□□□ -0.5
HOXC6-204ENST00000509328 HIGD1BQ9P298 99 aa11.92□□□□□ -0.5
HOXC6-204ENST00000509328 ERC2-IT1O76042 136 aa11.91□□□□□ -0.5
HOXC6-204ENST00000509328 C6orf99Q4VX62 202 aa11.91□□□□□ -0.5
HOXC6-204ENST00000509328 TYMSOSQ8TAI1 123 aa11.91□□□□□ -0.5
HOXC6-204ENST00000509328 KRTAP13-2Q52LG2 175 aa11.9□□□□□ -0.5
HOXC6-204ENST00000509328 COX7BP24311 80 aa11.88□□□□□ -0.51
HOXC6-204ENST00000509328 TRBV7-6A0A0J9YX20 115 aa11.87□□□□□ -0.51
HOXC6-204ENST00000509328 ELOF1P60002 83 aaKnown RBP11.87□□□□□ -0.51
HOXC6-204ENST00000509328 C2orf91Q6ZV80 131 aa11.87□□□□□ -0.51
HOXC6-204ENST00000509328 DHRS4-AS1Q9P1J3 65 aa11.87□□□□□ -0.51
HOXC6-204ENST00000509328 LINC00483Q53H64 154 aa11.86□□□□□ -0.51
HOXC6-204ENST00000509328 GAGE2AQ6NT46 116 aa11.85□□□□□ -0.51
HOXC6-204ENST00000509328 SMIM11BQ8TCY0 68 aa11.84□□□□□ -0.51
HOXC6-204ENST00000509328 A0A1B0GWB2 263 aa11.83□□□□□ -0.52
HOXC6-204ENST00000509328 TAL2Q16559 108 aa11.83□□□□□ -0.52
HOXC6-204ENST00000509328 HMCN2Q8NDA2 5059 aa11.83□□□□□ -0.52
HOXC6-204ENST00000509328 C3orf22Q8N5N4 141 aa11.82□□□□□ -0.52
HOXC6-204ENST00000509328 C12orf57Q99622 126 aa11.82□□□□□ -0.52
HOXC6-204ENST00000509328 ST20-AS1Q8NBB2 130 aa11.79□□□□□ -0.52
HOXC6-204ENST00000509328 CEND1Q8N111 149 aa11.78□□□□□ -0.52
HOXC6-204ENST00000509328 LINC00304Q8N9R0 145 aa11.78□□□□□ -0.52
HOXC6-204ENST00000509328 VAMP3Q15836 100 aa11.77□□□□□ -0.53
HOXC6-204ENST00000509328 CFC1BP0CG36 223 aa11.76□□□□□ -0.53
HOXC6-204ENST00000509328 CFC1P0CG37 223 aa11.76□□□□□ -0.53
HOXC6-204ENST00000509328 RAB37Q96AX2 223 aa11.75□□□□□ -0.53
HOXC6-204ENST00000509328 UQCR10Q9UDW1 63 aa11.75□□□□□ -0.53
HOXC6-204ENST00000509328 A0A0B4J2C4 111 aa11.74□□□□□ -0.53
HOXC6-204ENST00000509328 TMEM238LA0A1B0GVL6 79 aa11.74□□□□□ -0.53
HOXC6-204ENST00000509328 A6NJY4 79 aa11.74□□□□□ -0.53
HOXC6-204ENST00000509328 TSPAN13O95857 204 aa11.74□□□□□ -0.53
HOXC6-204ENST00000509328 SPRR1BP22528 89 aa11.74□□□□□ -0.53
HOXC6-204ENST00000509328 NHP2Q9NX24 153 aaKnown RBP11.74□□□□□ -0.53
HOXC6-204ENST00000509328 IGLV9-49A0A0B4J1Y8 123 aa11.73□□□□□ -0.53
HOXC6-204ENST00000509328 HSD52Q0P140 79 aa11.72□□□□□ -0.53
HOXC6-204ENST00000509328 CTAG1AP78358 180 aa11.71□□□□□ -0.53
HOXC6-204ENST00000509328 MOBPQ13875 183 aa11.71□□□□□ -0.53
HOXC6-204ENST00000509328 Q8NBF4 154 aa11.71□□□□□ -0.53
HOXC6-204ENST00000509328 SLC25A20O43772 301 aa11.7□□□□□ -0.54
HOXC6-204ENST00000509328 FXYD2P54710 66 aa11.7□□□□□ -0.54
HOXC6-204ENST00000509328 SPAG11AQ6PDA7 123 aa11.7□□□□□ -0.54
HOXC6-204ENST00000509328 H7C2G1 150 aa11.69□□□□□ -0.54
HOXC6-204ENST00000509328 BVES-AS1Q5T3Y7 98 aa11.69□□□□□ -0.54
HOXC6-204ENST00000509328 SSBP3-AS1Q7Z2R9 100 aa11.69□□□□□ -0.54
HOXC6-204ENST00000509328 TEX49A0A1B0GTD5 131 aa11.68□□□□□ -0.54
HOXC6-204ENST00000509328 SMIM6P0DI80 62 aa11.68□□□□□ -0.54
HOXC6-204ENST00000509328 C4orf48Q5BLP8 95 aa11.68□□□□□ -0.54
HOXC6-204ENST00000509328 LINC00575Q6W349 94 aa11.68□□□□□ -0.54
HOXC6-204ENST00000509328 DEFB105AQ8NG35 78 aa11.68□□□□□ -0.54
HOXC6-204ENST00000509328 C9orf153Q5TBE3 101 aa11.67□□□□□ -0.54
HOXC6-204ENST00000509328 IGLV5-48A0A075B6I7 105 aa11.66□□□□□ -0.54
HOXC6-204ENST00000509328 LAMTOR3Q9UHA4 124 aa11.66□□□□□ -0.54
HOXC6-204ENST00000509328 PRO1854Q9UHT4 67 aa11.66□□□□□ -0.54
HOXC6-204ENST00000509328 hADV29S1A0JD25 119 aa11.64□□□□□ -0.55
HOXC6-204ENST00000509328 LINC01547P58512 204 aaPredicted RBP11.64□□□□□ -0.55
HOXC6-204ENST00000509328 Q1RN00 199 aa11.63□□□□□ -0.55
HOXC6-204ENST00000509328 PRO1933Q9H354 126 aa11.63□□□□□ -0.55
HOXC6-204ENST00000509328 SPINK1P00995 79 aa11.61□□□□□ -0.55
HOXC6-204ENST00000509328 PRR4Q16378 134 aa11.61□□□□□ -0.55
HOXC6-204ENST00000509328 LOC105371267A0A1B0GV96 52 aa11.6□□□□□ -0.55
HOXC6-204ENST00000509328 H0YGX0 51 aa11.59□□□□□ -0.55
HOXC6-204ENST00000509328 Q6ZQY7 126 aa11.59□□□□□ -0.55
HOXC6-204ENST00000509328 SMIM29Q86T20 159 aa11.59□□□□□ -0.55
HOXC6-204ENST00000509328 Q8N377 158 aa11.59□□□□□ -0.55
HOXC6-204ENST00000509328 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.57□□□□□ -0.56
HOXC6-204ENST00000509328 K7ERJ3 54 aa11.55□□□□□ -0.56
HOXC6-204ENST00000509328 SNCGO76070 127 aa11.55□□□□□ -0.56
HOXC6-204ENST00000509328 RPS29P62273 56 aaKnown RBP11.55□□□□□ -0.56
HOXC6-204ENST00000509328 RETNLBQ9BQ08 111 aa11.55□□□□□ -0.56
HOXC6-204ENST00000509328 TRIAP1O43715 76 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms