RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 C16orf90A8MZG2 172 aa5.97□□□□□ -1.45
HTT-205ENST00000509043 SPRR1AP35321 89 aa5.97□□□□□ -1.45
HTT-205ENST00000509043 SERTAD4-AS1Q5TG53 156 aa5.97□□□□□ -1.45
HTT-205ENST00000509043 ATP5EP2Q5VTU8 51 aa5.97□□□□□ -1.45
HTT-205ENST00000509043 DSCR8Q96T75 97 aa5.97□□□□□ -1.45
HTT-205ENST00000509043 KRTAP1-5Q9BYS1 174 aa5.97□□□□□ -1.45
HTT-205ENST00000509043 KRTAP21-3Q3LHN1 58 aa5.96□□□□□ -1.46
HTT-205ENST00000509043 Q6JHZ5 121 aa5.96□□□□□ -1.46
HTT-205ENST00000509043 MRPL55Q7Z7F7 128 aaKnown RBP5.96□□□□□ -1.46
HTT-205ENST00000509043 ETDCA0A1B0GVM5 59 aa5.95□□□□□ -1.46
HTT-205ENST00000509043 Q6ZQT0 140 aa5.95□□□□□ -1.46
HTT-205ENST00000509043 Q6ZRX8 168 aa5.95□□□□□ -1.46
HTT-205ENST00000509043 LINC00474Q9P2X8 69 aa5.95□□□□□ -1.46
HTT-205ENST00000509043 DYNC2H1Q8NCM8 4307 aaKnown RBP5.95□□□□□ -1.46
HTT-205ENST00000509043 DNAH9Q9NYC9 4486 aa5.94□□□□□ -1.46
HTT-205ENST00000509043 KRTAP4-16G5E9R7 235 aaPredicted RBP5.94□□□□□ -1.46
HTT-205ENST00000509043 NDUFV3P56181 108 aaKnown RBP5.94□□□□□ -1.46
HTT-205ENST00000509043 SMCR5Q8TEV8 140 aa5.94□□□□□ -1.46
HTT-205ENST00000509043 UBL5Q9BZL1 73 aa5.94□□□□□ -1.46
HTT-205ENST00000509043 LINC00846Q9NV44 126 aa5.94□□□□□ -1.46
HTT-205ENST00000509043 STAB2Q8WWQ8 2551 aa5.94□□□□□ -1.46
HTT-205ENST00000509043 B5MCH6 92 aa5.93□□□□□ -1.46
HTT-205ENST00000509043 TRBV7-4A0A0J9YYF1 115 aa5.92□□□□□ -1.46
HTT-205ENST00000509043 A0A1B0GW54 56 aa5.92□□□□□ -1.46
HTT-205ENST00000509043 LRCOL1A6NCL2 159 aa5.92□□□□□ -1.46
HTT-205ENST00000509043 FAM19A5Q7Z5A7 132 aaPredicted RBP5.92□□□□□ -1.46
HTT-205ENST00000509043 ANAPC13Q9BS18 74 aa5.92□□□□□ -1.46
HTT-205ENST00000509043 DNAH1Q9P2D7 4330 aa5.92□□□□□ -1.46
HTT-205ENST00000509043 FAM168BA1KXE4 195 aa5.91□□□□□ -1.46
HTT-205ENST00000509043 REG3GQ6UW15 175 aa5.91□□□□□ -1.46
HTT-205ENST00000509043 KRTAP7-1Q8IUC3 87 aa5.91□□□□□ -1.46
HTT-205ENST00000509043 C9orf163Q8N9P6 203 aa5.91□□□□□ -1.46
HTT-205ENST00000509043 IGLV5-48A0A075B6I7 105 aa5.9□□□□□ -1.46
HTT-205ENST00000509043 A0A096LNI7 61 aa5.9□□□□□ -1.46
HTT-205ENST00000509043 Q6ZRN7 208 aaPredicted RBP5.9□□□□□ -1.46
HTT-205ENST00000509043 COL7A1Q02388 2944 aa5.89□□□□□ -1.47
HTT-205ENST00000509043 RPL37AP8A6NKH3 93 aa5.89□□□□□ -1.47
HTT-205ENST00000509043 H0Y9J4 135 aa5.88□□□□□ -1.47
HTT-205ENST00000509043 Q9BRP9 147 aa5.87□□□□□ -1.47
HTT-205ENST00000509043 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.86□□□□□ -1.47
HTT-205ENST00000509043 IGKV2-24A0A0C4DH68 120 aa5.86□□□□□ -1.47
HTT-205ENST00000509043 FAM236AA0A1B0GUQ0 79 aa5.86□□□□□ -1.47
HTT-205ENST00000509043 FAM236BA0A1B0GV22 79 aa5.86□□□□□ -1.47
HTT-205ENST00000509043 LINC01547P58512 204 aaPredicted RBP5.86□□□□□ -1.47
HTT-205ENST00000509043 UBE2BP63146 152 aa5.86□□□□□ -1.47
HTT-205ENST00000509043 CXCL6P80162 114 aa5.86□□□□□ -1.47
HTT-205ENST00000509043 Q8N377 158 aa5.86□□□□□ -1.47
HTT-205ENST00000509043 A0A1W2PNN7 141 aa5.85□□□□□ -1.47
HTT-205ENST00000509043 ATOX1O00244 68 aa5.85□□□□□ -1.47
HTT-205ENST00000509043 HIST1H4AP62805 103 aaKnown RBP5.85□□□□□ -1.47
HTT-205ENST00000509043 Q6ZR54 194 aa5.85□□□□□ -1.47
HTT-205ENST00000509043 EPM2AB3EWF7 344 aa5.84□□□□□ -1.47
HTT-205ENST00000509043 FUSP35637 526 aaKnown RBP eCLIP5.84□□□□□ -1.47
HTT-205ENST00000509043 Q6ZVQ6 151 aa5.84□□□□□ -1.47
HTT-205ENST00000509043 A0A087WTM6 91 aa5.83□□□□□ -1.48
HTT-205ENST00000509043 IGKV3D-7A0A0C4DH55 119 aa5.83□□□□□ -1.48
HTT-205ENST00000509043 BCE1O60756 84 aa5.83□□□□□ -1.48
HTT-205ENST00000509043 TNP2Q05952 138 aa5.83□□□□□ -1.48
HTT-205ENST00000509043 FAM19A1Q7Z5A9 133 aa5.83□□□□□ -1.48
HTT-205ENST00000509043 F8WEM9 126 aa5.82□□□□□ -1.48
HTT-205ENST00000509043 DEFB105AQ8NG35 78 aa5.82□□□□□ -1.48
HTT-205ENST00000509043 DNAH7Q8WXX0 4024 aa5.81□□□□□ -1.48
HTT-205ENST00000509043 SPACA4Q8TDM5 124 aa5.81□□□□□ -1.48
HTT-205ENST00000509043 IGLV8-61A0A075B6I0 122 aa5.8□□□□□ -1.48
HTT-205ENST00000509043 SPRR1BP22528 89 aa5.8□□□□□ -1.48
HTT-205ENST00000509043 C1orf137Q5JT78 98 aa5.8□□□□□ -1.48
HTT-205ENST00000509043 C1orf134Q5TEV5 83 aa5.8□□□□□ -1.48
HTT-205ENST00000509043 MEGF8Q7Z7M0 2845 aa5.8□□□□□ -1.48
HTT-205ENST00000509043 M0R2N4 97 aa5.79□□□□□ -1.48
HTT-205ENST00000509043 UQCRQO14949 82 aa5.79□□□□□ -1.48
HTT-205ENST00000509043 ERC2-IT1O76042 136 aa5.79□□□□□ -1.48
HTT-205ENST00000509043 CHTF8P0CG12 524 aa5.79□□□□□ -1.48
HTT-205ENST00000509043 HAMPP81172 84 aa5.79□□□□□ -1.48
HTT-205ENST00000509043 NREPQ16612 68 aa5.79□□□□□ -1.48
HTT-205ENST00000509043 PHF5AQ7RTV0 110 aaKnown RBP5.79□□□□□ -1.48
HTT-205ENST00000509043 ST20-AS1Q8NBB2 130 aa5.79□□□□□ -1.48
HTT-205ENST00000509043 Q8NBF4 154 aa5.79□□□□□ -1.48
HTT-205ENST00000509043 WWC2-AS2Q96NR7 200 aa5.79□□□□□ -1.48
HTT-205ENST00000509043 SPRR4Q96PI1 79 aa5.79□□□□□ -1.48
HTT-205ENST00000509043 PLECQ15149 4684 aaKnown RBP5.79□□□□□ -1.48
HTT-205ENST00000509043 RTL8CO15255 209 aa5.78□□□□□ -1.48
HTT-205ENST00000509043 SMIM20Q8N5G0 67 aa5.78□□□□□ -1.48
HTT-205ENST00000509043 CSMD3Q7Z407 3707 aa5.78□□□□□ -1.48
HTT-205ENST00000509043 VPS13DQ5THJ4 4388 aa5.77□□□□□ -1.49
HTT-205ENST00000509043 UBE2AP49459 152 aa5.77□□□□□ -1.49
HTT-205ENST00000509043 PRLHP81277 87 aa5.77□□□□□ -1.49
HTT-205ENST00000509043 SMIM29Q86T20 159 aa5.77□□□□□ -1.49
HTT-205ENST00000509043 DPH3Q96FX2 82 aa5.77□□□□□ -1.49
HTT-205ENST00000509043 C3orf84H3BNL1 204 aa5.76□□□□□ -1.49
HTT-205ENST00000509043 CRYGAP11844 174 aa5.76□□□□□ -1.49
HTT-205ENST00000509043 COX7CP15954 63 aa5.76□□□□□ -1.49
HTT-205ENST00000509043 C3orf22Q8N5N4 141 aa5.76□□□□□ -1.49
HTT-205ENST00000509043 SERP2Q8N6R1 65 aa5.76□□□□□ -1.49
HTT-205ENST00000509043 HIGD2AQ9BW72 106 aa5.76□□□□□ -1.49
HTT-205ENST00000509043 A0A1W2PNM2 257 aa5.75□□□□□ -1.49
HTT-205ENST00000509043 KRTAP13-1Q8IUC0 172 aa5.75□□□□□ -1.49
HTT-205ENST00000509043 LINC00476Q8WZB0 136 aa5.75□□□□□ -1.49
HTT-205ENST00000509043 PLAC8Q9NZF1 115 aa5.75□□□□□ -1.49
HTT-205ENST00000509043 A0A087WVE0 104 aa5.74□□□□□ -1.49
HTT-205ENST00000509043 IGLV5-52A0A0A0MRZ9 124 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms