RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 ZNF706Q9Y5V0 76 aaPredicted RBP4.65□□□□□ -1.67
UBE2D3-222ENST00000508238 LOC107984156A0A0G2JMH3 177 aa4.64□□□□□ -1.67
UBE2D3-222ENST00000508238 TRBV10-2A0A0K0K1G8 114 aa4.64□□□□□ -1.67
UBE2D3-222ENST00000508238 A0A0U1RRA0 63 aa4.64□□□□□ -1.67
UBE2D3-222ENST00000508238 C20orf202A1L168 122 aa4.64□□□□□ -1.67
UBE2D3-222ENST00000508238 PRLHP81277 87 aa4.64□□□□□ -1.67
UBE2D3-222ENST00000508238 PRR4Q16378 134 aa4.64□□□□□ -1.67
UBE2D3-222ENST00000508238 ARL17AQ8IVW1 177 aa4.64□□□□□ -1.67
UBE2D3-222ENST00000508238 MIR7-3HGQ8N6C7 128 aa4.64□□□□□ -1.67
UBE2D3-222ENST00000508238 PAM16Q9Y3D7 125 aa4.64□□□□□ -1.67
UBE2D3-222ENST00000508238 SYS1-DBNDD2H3BUS1 97 aa4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 HIST1H2BKO60814 126 aa4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 NDUFC2O95298 119 aa4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 TSPAN13O95857 204 aa4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 HIST1H2BJP06899 126 aa4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 HIST1H2BOP23527 126 aa4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 HIST1H2BBP33778 126 aa4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 HIST1H2BDP58876 126 aa4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 HIST1H2BCP62807 126 aa4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 JOSD1Q15040 202 aaPredicted RBP4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 HIST2H2BEQ16778 126 aa4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 HIST1H2BHQ93079 126 aa4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 HIST1H2BNQ99877 126 aa4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 HIST1H2BMQ99879 126 aa4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 KCNQ1DNQ9H478 68 aa4.63□□□□□ -1.67
UBE2D3-222ENST00000508238 ETDCA0A1B0GVM5 59 aa4.62□□□□□ -1.67
UBE2D3-222ENST00000508238 E9PLD3 99 aa4.62□□□□□ -1.67
UBE2D3-222ENST00000508238 SPRR1AP35321 89 aa4.62□□□□□ -1.67
UBE2D3-222ENST00000508238 S100A7L2Q5SY68 101 aa4.62□□□□□ -1.67
UBE2D3-222ENST00000508238 SPAG11AQ6PDA7 123 aa4.62□□□□□ -1.67
UBE2D3-222ENST00000508238 LINC00337Q8N6G1 96 aa4.62□□□□□ -1.67
UBE2D3-222ENST00000508238 Q8N9P0 234 aaPredicted RBP4.62□□□□□ -1.67
UBE2D3-222ENST00000508238 LINC00304Q8N9R0 145 aa4.62□□□□□ -1.67
UBE2D3-222ENST00000508238 KRTAP4-16G5E9R7 235 aaPredicted RBP4.61□□□□□ -1.67
UBE2D3-222ENST00000508238 S100A1P23297 94 aa4.61□□□□□ -1.67
UBE2D3-222ENST00000508238 SNRPEP62304 92 aaKnown RBP4.61□□□□□ -1.67
UBE2D3-222ENST00000508238 LINC00518Q8N0U6 118 aa4.61□□□□□ -1.67
UBE2D3-222ENST00000508238 SPANXB1Q9NS25 103 aaPredicted RBP4.61□□□□□ -1.67
UBE2D3-222ENST00000508238 C5orf52A6NGY3 159 aa4.6□□□□□ -1.67
UBE2D3-222ENST00000508238 TIMM17BO60830 172 aa4.6□□□□□ -1.67
UBE2D3-222ENST00000508238 SCGB1D1O95968 90 aa4.6□□□□□ -1.67
UBE2D3-222ENST00000508238 DDTP30046 118 aa4.6□□□□□ -1.67
UBE2D3-222ENST00000508238 TSPEAR-AS2P59090 65 aa4.6□□□□□ -1.67
UBE2D3-222ENST00000508238 COA6Q5JTJ3 125 aaKnown RBP4.6□□□□□ -1.67
UBE2D3-222ENST00000508238 LINC01545Q5VT33 79 aa4.6□□□□□ -1.67
UBE2D3-222ENST00000508238 SPRR4Q96PI1 79 aa4.6□□□□□ -1.67
UBE2D3-222ENST00000508238 HIGD2AQ9BW72 106 aa4.6□□□□□ -1.67
UBE2D3-222ENST00000508238 TRBV10-3A0A0K0K1G6 114 aa4.59□□□□□ -1.67
UBE2D3-222ENST00000508238 Q6ZVH6 145 aa4.59□□□□□ -1.67
UBE2D3-222ENST00000508238 MUC2Q02817 5179 aa4.58□□□□□ -1.68
UBE2D3-222ENST00000508238 A0A0J9YXY3 114 aa4.58□□□□□ -1.68
UBE2D3-222ENST00000508238 PMCHL2Q9BQD1 86 aa4.58□□□□□ -1.68
UBE2D3-222ENST00000508238 NCR3O14931 201 aa4.57□□□□□ -1.68
UBE2D3-222ENST00000508238 S100A6P06703 90 aa4.57□□□□□ -1.68
UBE2D3-222ENST00000508238 S100A2P29034 98 aa4.57□□□□□ -1.68
UBE2D3-222ENST00000508238 KRTDAPP60985 99 aa4.57□□□□□ -1.68
UBE2D3-222ENST00000508238 LINC00483Q53H64 154 aa4.57□□□□□ -1.68
UBE2D3-222ENST00000508238 SLC25A34Q6PIV7 304 aa4.57□□□□□ -1.68
UBE2D3-222ENST00000508238 SCGB1D4Q6XE38 83 aa4.57□□□□□ -1.68
UBE2D3-222ENST00000508238 C3orf22Q8N5N4 141 aa4.57□□□□□ -1.68
UBE2D3-222ENST00000508238 DAND5Q8N907 189 aa4.57□□□□□ -1.68
UBE2D3-222ENST00000508238 SMCR5Q8TEV8 140 aa4.57□□□□□ -1.68
UBE2D3-222ENST00000508238 SPANXCQ9NY87 97 aa4.57□□□□□ -1.68
UBE2D3-222ENST00000508238 ZNF815PA8K554 130 aa4.56□□□□□ -1.68
UBE2D3-222ENST00000508238 HSBP1L1C9JCN9 74 aa4.56□□□□□ -1.68
UBE2D3-222ENST00000508238 IGLV6-57P01721 117 aa4.56□□□□□ -1.68
UBE2D3-222ENST00000508238 C3orf79P0CE67 100 aa4.56□□□□□ -1.68
UBE2D3-222ENST00000508238 IFITM1P13164 125 aa4.56□□□□□ -1.68
UBE2D3-222ENST00000508238 TPRXLQ17RH7 258 aa4.56□□□□□ -1.68
UBE2D3-222ENST00000508238 SSBP3-AS1Q7Z2R9 100 aa4.56□□□□□ -1.68
UBE2D3-222ENST00000508238 PPDPFQ9H3Y8 114 aa4.56□□□□□ -1.68
UBE2D3-222ENST00000508238 IGLV7-46A0A075B6I9 117 aa4.55□□□□□ -1.68
UBE2D3-222ENST00000508238 TRAV23DV6A0A075B6W5 121 aa4.55□□□□□ -1.68
UBE2D3-222ENST00000508238 ZNF73O43830 326 aaPredicted RBP4.55□□□□□ -1.68
UBE2D3-222ENST00000508238 ADAMTSL4-AS1Q5T5F5 129 aa4.55□□□□□ -1.68
UBE2D3-222ENST00000508238 OR13C6PQ8NH95 151 aa4.55□□□□□ -1.68
UBE2D3-222ENST00000508238 LINC00308Q8TCZ7 52 aa4.55□□□□□ -1.68
UBE2D3-222ENST00000508238 RETNLBQ9BQ08 111 aa4.55□□□□□ -1.68
UBE2D3-222ENST00000508238 SPANXDQ9BXN6 97 aa4.55□□□□□ -1.68
UBE2D3-222ENST00000508238 SPINK1P00995 79 aa4.54□□□□□ -1.68
UBE2D3-222ENST00000508238 Q6ZRX8 168 aa4.54□□□□□ -1.68
UBE2D3-222ENST00000508238 DHRS4-AS1Q9P1J3 65 aa4.54□□□□□ -1.68
UBE2D3-222ENST00000508238 A4D1N5 150 aa4.53□□□□□ -1.68
UBE2D3-222ENST00000508238 ERC2-IT1O76042 136 aa4.53□□□□□ -1.68
UBE2D3-222ENST00000508238 GAGE2AQ6NT46 116 aa4.53□□□□□ -1.68
UBE2D3-222ENST00000508238 SOSTDC1Q6X4U4 206 aa4.53□□□□□ -1.68
UBE2D3-222ENST00000508238 FP248Q71RG6 208 aaPredicted RBP4.53□□□□□ -1.68
UBE2D3-222ENST00000508238 Q8NBF4 154 aa4.53□□□□□ -1.68
UBE2D3-222ENST00000508238 Q9BRP9 147 aa4.53□□□□□ -1.68
UBE2D3-222ENST00000508238 TRBV7-6A0A0J9YX20 115 aa4.52□□□□□ -1.69
UBE2D3-222ENST00000508238 LITAFQ99732 161 aa4.52□□□□□ -1.69
UBE2D3-222ENST00000508238 TRAV13-2A0A0B4J235 113 aa4.51□□□□□ -1.69
UBE2D3-222ENST00000508238 A0A0U1RQV1 116 aa4.51□□□□□ -1.69
UBE2D3-222ENST00000508238 SEC61BP60468 96 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-222ENST00000508238 NPC2P61916 151 aa4.51□□□□□ -1.69
UBE2D3-222ENST00000508238 RPS29P62273 56 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-222ENST00000508238 VAMP3Q15836 100 aa4.51□□□□□ -1.69
UBE2D3-222ENST00000508238 NHP2Q9NX24 153 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-222ENST00000508238 LAMTOR3Q9UHA4 124 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms