RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-222	ENST00000508238	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.65	□□□□□ -1.67
UBE2D3-222	ENST00000508238	LOC107984156	A0A0G2JMH3	177 aa		4.64	□□□□□ -1.67
UBE2D3-222	ENST00000508238	TRBV10-2	A0A0K0K1G8	114 aa		4.64	□□□□□ -1.67
UBE2D3-222	ENST00000508238		A0A0U1RRA0	63 aa		4.64	□□□□□ -1.67
UBE2D3-222	ENST00000508238	C20orf202	A1L168	122 aa		4.64	□□□□□ -1.67
UBE2D3-222	ENST00000508238	PRLH	P81277	87 aa		4.64	□□□□□ -1.67
UBE2D3-222	ENST00000508238	PRR4	Q16378	134 aa		4.64	□□□□□ -1.67
UBE2D3-222	ENST00000508238	ARL17A	Q8IVW1	177 aa		4.64	□□□□□ -1.67
UBE2D3-222	ENST00000508238	MIR7-3HG	Q8N6C7	128 aa		4.64	□□□□□ -1.67
UBE2D3-222	ENST00000508238	PAM16	Q9Y3D7	125 aa		4.64	□□□□□ -1.67
UBE2D3-222	ENST00000508238	SYS1-DBNDD2	H3BUS1	97 aa		4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	HIST1H2BK	O60814	126 aa		4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	NDUFC2	O95298	119 aa		4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	TSPAN13	O95857	204 aa		4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	HIST1H2BJ	P06899	126 aa		4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	HIST1H2BO	P23527	126 aa		4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	HIST1H2BB	P33778	126 aa		4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	HIST1H2BD	P58876	126 aa		4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	HIST1H2BC	P62807	126 aa		4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	JOSD1	Q15040	202 aa	Predicted RBP	4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	HIST2H2BE	Q16778	126 aa		4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	HIST1H2BH	Q93079	126 aa		4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	HIST1H2BN	Q99877	126 aa		4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	HIST1H2BM	Q99879	126 aa		4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	KCNQ1DN	Q9H478	68 aa		4.63	□□□□□ -1.67
UBE2D3-222	ENST00000508238	ETDC	A0A1B0GVM5	59 aa		4.62	□□□□□ -1.67
UBE2D3-222	ENST00000508238		E9PLD3	99 aa		4.62	□□□□□ -1.67
UBE2D3-222	ENST00000508238	SPRR1A	P35321	89 aa		4.62	□□□□□ -1.67
UBE2D3-222	ENST00000508238	S100A7L2	Q5SY68	101 aa		4.62	□□□□□ -1.67
UBE2D3-222	ENST00000508238	SPAG11A	Q6PDA7	123 aa		4.62	□□□□□ -1.67
UBE2D3-222	ENST00000508238	LINC00337	Q8N6G1	96 aa		4.62	□□□□□ -1.67
UBE2D3-222	ENST00000508238		Q8N9P0	234 aa	Predicted RBP	4.62	□□□□□ -1.67
UBE2D3-222	ENST00000508238	LINC00304	Q8N9R0	145 aa		4.62	□□□□□ -1.67
UBE2D3-222	ENST00000508238	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.61	□□□□□ -1.67
UBE2D3-222	ENST00000508238	S100A1	P23297	94 aa		4.61	□□□□□ -1.67
UBE2D3-222	ENST00000508238	SNRPE	P62304	92 aa	Known RBP	4.61	□□□□□ -1.67
UBE2D3-222	ENST00000508238	LINC00518	Q8N0U6	118 aa		4.61	□□□□□ -1.67
UBE2D3-222	ENST00000508238	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.61	□□□□□ -1.67
UBE2D3-222	ENST00000508238	C5orf52	A6NGY3	159 aa		4.6	□□□□□ -1.67
UBE2D3-222	ENST00000508238	TIMM17B	O60830	172 aa		4.6	□□□□□ -1.67
UBE2D3-222	ENST00000508238	SCGB1D1	O95968	90 aa		4.6	□□□□□ -1.67
UBE2D3-222	ENST00000508238	DDT	P30046	118 aa		4.6	□□□□□ -1.67
UBE2D3-222	ENST00000508238	TSPEAR-AS2	P59090	65 aa		4.6	□□□□□ -1.67
UBE2D3-222	ENST00000508238	COA6	Q5JTJ3	125 aa	Known RBP	4.6	□□□□□ -1.67
UBE2D3-222	ENST00000508238	LINC01545	Q5VT33	79 aa		4.6	□□□□□ -1.67
UBE2D3-222	ENST00000508238	SPRR4	Q96PI1	79 aa		4.6	□□□□□ -1.67
UBE2D3-222	ENST00000508238	HIGD2A	Q9BW72	106 aa		4.6	□□□□□ -1.67
UBE2D3-222	ENST00000508238	TRBV10-3	A0A0K0K1G6	114 aa		4.59	□□□□□ -1.67
UBE2D3-222	ENST00000508238		Q6ZVH6	145 aa		4.59	□□□□□ -1.67
UBE2D3-222	ENST00000508238	MUC2	Q02817	5179 aa		4.58	□□□□□ -1.68
UBE2D3-222	ENST00000508238		A0A0J9YXY3	114 aa		4.58	□□□□□ -1.68
UBE2D3-222	ENST00000508238	PMCHL2	Q9BQD1	86 aa		4.58	□□□□□ -1.68
UBE2D3-222	ENST00000508238	NCR3	O14931	201 aa		4.57	□□□□□ -1.68
UBE2D3-222	ENST00000508238	S100A6	P06703	90 aa		4.57	□□□□□ -1.68
UBE2D3-222	ENST00000508238	S100A2	P29034	98 aa		4.57	□□□□□ -1.68
UBE2D3-222	ENST00000508238	KRTDAP	P60985	99 aa		4.57	□□□□□ -1.68
UBE2D3-222	ENST00000508238	LINC00483	Q53H64	154 aa		4.57	□□□□□ -1.68
UBE2D3-222	ENST00000508238	SLC25A34	Q6PIV7	304 aa		4.57	□□□□□ -1.68
UBE2D3-222	ENST00000508238	SCGB1D4	Q6XE38	83 aa		4.57	□□□□□ -1.68
UBE2D3-222	ENST00000508238	C3orf22	Q8N5N4	141 aa		4.57	□□□□□ -1.68
UBE2D3-222	ENST00000508238	DAND5	Q8N907	189 aa		4.57	□□□□□ -1.68
UBE2D3-222	ENST00000508238	SMCR5	Q8TEV8	140 aa		4.57	□□□□□ -1.68
UBE2D3-222	ENST00000508238	SPANXC	Q9NY87	97 aa		4.57	□□□□□ -1.68
UBE2D3-222	ENST00000508238	ZNF815P	A8K554	130 aa		4.56	□□□□□ -1.68
UBE2D3-222	ENST00000508238	HSBP1L1	C9JCN9	74 aa		4.56	□□□□□ -1.68
UBE2D3-222	ENST00000508238	IGLV6-57	P01721	117 aa		4.56	□□□□□ -1.68
UBE2D3-222	ENST00000508238	C3orf79	P0CE67	100 aa		4.56	□□□□□ -1.68
UBE2D3-222	ENST00000508238	IFITM1	P13164	125 aa		4.56	□□□□□ -1.68
UBE2D3-222	ENST00000508238	TPRXL	Q17RH7	258 aa		4.56	□□□□□ -1.68
UBE2D3-222	ENST00000508238	SSBP3-AS1	Q7Z2R9	100 aa		4.56	□□□□□ -1.68
UBE2D3-222	ENST00000508238	PPDPF	Q9H3Y8	114 aa		4.56	□□□□□ -1.68
UBE2D3-222	ENST00000508238	IGLV7-46	A0A075B6I9	117 aa		4.55	□□□□□ -1.68
UBE2D3-222	ENST00000508238	TRAV23DV6	A0A075B6W5	121 aa		4.55	□□□□□ -1.68
UBE2D3-222	ENST00000508238	ZNF73	O43830	326 aa	Predicted RBP	4.55	□□□□□ -1.68
UBE2D3-222	ENST00000508238	ADAMTSL4-AS1	Q5T5F5	129 aa		4.55	□□□□□ -1.68
UBE2D3-222	ENST00000508238	OR13C6P	Q8NH95	151 aa		4.55	□□□□□ -1.68
UBE2D3-222	ENST00000508238	LINC00308	Q8TCZ7	52 aa		4.55	□□□□□ -1.68
UBE2D3-222	ENST00000508238	RETNLB	Q9BQ08	111 aa		4.55	□□□□□ -1.68
UBE2D3-222	ENST00000508238	SPANXD	Q9BXN6	97 aa		4.55	□□□□□ -1.68
UBE2D3-222	ENST00000508238	SPINK1	P00995	79 aa		4.54	□□□□□ -1.68
UBE2D3-222	ENST00000508238		Q6ZRX8	168 aa		4.54	□□□□□ -1.68
UBE2D3-222	ENST00000508238	DHRS4-AS1	Q9P1J3	65 aa		4.54	□□□□□ -1.68
UBE2D3-222	ENST00000508238		A4D1N5	150 aa		4.53	□□□□□ -1.68
UBE2D3-222	ENST00000508238	ERC2-IT1	O76042	136 aa		4.53	□□□□□ -1.68
UBE2D3-222	ENST00000508238	GAGE2A	Q6NT46	116 aa		4.53	□□□□□ -1.68
UBE2D3-222	ENST00000508238	SOSTDC1	Q6X4U4	206 aa		4.53	□□□□□ -1.68
UBE2D3-222	ENST00000508238	FP248	Q71RG6	208 aa	Predicted RBP	4.53	□□□□□ -1.68
UBE2D3-222	ENST00000508238		Q8NBF4	154 aa		4.53	□□□□□ -1.68
UBE2D3-222	ENST00000508238		Q9BRP9	147 aa		4.53	□□□□□ -1.68
UBE2D3-222	ENST00000508238	TRBV7-6	A0A0J9YX20	115 aa		4.52	□□□□□ -1.69
UBE2D3-222	ENST00000508238	LITAF	Q99732	161 aa		4.52	□□□□□ -1.69
UBE2D3-222	ENST00000508238	TRAV13-2	A0A0B4J235	113 aa		4.51	□□□□□ -1.69
UBE2D3-222	ENST00000508238		A0A0U1RQV1	116 aa		4.51	□□□□□ -1.69
UBE2D3-222	ENST00000508238	SEC61B	P60468	96 aa	Known RBP	4.51	□□□□□ -1.69
UBE2D3-222	ENST00000508238	NPC2	P61916	151 aa		4.51	□□□□□ -1.69
UBE2D3-222	ENST00000508238	RPS29	P62273	56 aa	Known RBP	4.51	□□□□□ -1.69
UBE2D3-222	ENST00000508238	VAMP3	Q15836	100 aa		4.51	□□□□□ -1.69
UBE2D3-222	ENST00000508238	NHP2	Q9NX24	153 aa	Known RBP	4.51	□□□□□ -1.69
UBE2D3-222	ENST00000508238	LAMTOR3	Q9UHA4	124 aa		4.5	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 53 ms