RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 KRTAP10-8P60410 259 aa9□□□□□ -0.97
RNF4-210ENST00000508235 MUSTN1Q8IVN3 82 aa9□□□□□ -0.97
RNF4-210ENST00000508235 HIGD2AQ9BW72 106 aa9□□□□□ -0.97
RNF4-210ENST00000508235 PAM16Q9Y3D7 125 aa9□□□□□ -0.97
RNF4-210ENST00000508235 MYCBP2O75592 4640 aa9□□□□□ -0.97
RNF4-210ENST00000508235 HINT1P49773 126 aaPredicted RBP8.99□□□□□ -0.97
RNF4-210ENST00000508235 SPATA45Q537H7 98 aa8.99□□□□□ -0.97
RNF4-210ENST00000508235 PKHD1L1Q86WI1 4243 aa8.98□□□□□ -0.97
RNF4-210ENST00000508235 ZNF73O43830 326 aaPredicted RBP8.98□□□□□ -0.97
RNF4-210ENST00000508235 PRR26Q8N8Z3 221 aa8.98□□□□□ -0.97
RNF4-210ENST00000508235 B5MCH6 92 aa8.97□□□□□ -0.97
RNF4-210ENST00000508235 ZNF706Q9Y5V0 76 aaPredicted RBP8.97□□□□□ -0.97
RNF4-210ENST00000508235 CRYGAP11844 174 aa8.96□□□□□ -0.98
RNF4-210ENST00000508235 Q6ZRX8 168 aa8.96□□□□□ -0.98
RNF4-210ENST00000508235 FAM229BQ4G0N7 80 aa8.95□□□□□ -0.98
RNF4-210ENST00000508235 PYY3Q5JQD4 70 aa8.95□□□□□ -0.98
RNF4-210ENST00000508235 C14orf144Q96I85 54 aa8.95□□□□□ -0.98
RNF4-210ENST00000508235 TRAV13-2A0A0B4J235 113 aa8.94□□□□□ -0.98
RNF4-210ENST00000508235 A6NDN8 102 aa8.94□□□□□ -0.98
RNF4-210ENST00000508235 SLC25A34Q6PIV7 304 aa8.94□□□□□ -0.98
RNF4-210ENST00000508235 HIST1H4GQ99525 98 aa8.94□□□□□ -0.98
RNF4-210ENST00000508235 SMCR5Q8TEV8 140 aa8.93□□□□□ -0.98
RNF4-210ENST00000508235 LRP1Q07954 4544 aaKnown RBP8.92□□□□□ -0.98
RNF4-210ENST00000508235 HIGD1BQ9P298 99 aa8.92□□□□□ -0.98
RNF4-210ENST00000508235 SPRR4Q96PI1 79 aa8.91□□□□□ -0.98
RNF4-210ENST00000508235 A4D1N5 150 aa8.9□□□□□ -0.98
RNF4-210ENST00000508235 C6orf99Q4VX62 202 aa8.9□□□□□ -0.98
RNF4-210ENST00000508235 Q9BRP9 147 aa8.9□□□□□ -0.98
RNF4-210ENST00000508235 A0A087X002 238 aa8.89□□□□□ -0.99
RNF4-210ENST00000508235 TRBV7-6A0A0J9YX20 115 aa8.89□□□□□ -0.99
RNF4-210ENST00000508235 TYMSOSQ8TAI1 123 aa8.89□□□□□ -0.99
RNF4-210ENST00000508235 ANAPC11Q9NYG5 84 aa8.89□□□□□ -0.99
RNF4-210ENST00000508235 FAT3Q8TDW7 4589 aa8.88□□□□□ -0.99
RNF4-210ENST00000508235 COX7BP24311 80 aa8.88□□□□□ -0.99
RNF4-210ENST00000508235 DHRS4-AS1Q9P1J3 65 aa8.88□□□□□ -0.99
RNF4-210ENST00000508235 ELOF1P60002 83 aaKnown RBP8.87□□□□□ -0.99
RNF4-210ENST00000508235 TAL2Q16559 108 aa8.87□□□□□ -0.99
RNF4-210ENST00000508235 ERC2-IT1O76042 136 aa8.86□□□□□ -0.99
RNF4-210ENST00000508235 A0A1B0GWB2 263 aa8.85□□□□□ -0.99
RNF4-210ENST00000508235 C2orf91Q6ZV80 131 aa8.85□□□□□ -0.99
RNF4-210ENST00000508235 KRTAP13-2Q52LG2 175 aa8.84□□□□□ -0.99
RNF4-210ENST00000508235 LINC00483Q53H64 154 aa8.84□□□□□ -0.99
RNF4-210ENST00000508235 GAGE2AQ6NT46 116 aa8.84□□□□□ -0.99
RNF4-210ENST00000508235 SMIM11BQ8TCY0 68 aa8.84□□□□□ -0.99
RNF4-210ENST00000508235 VAMP3Q15836 100 aa8.83□□□□□ -1
RNF4-210ENST00000508235 TMEM238LA0A1B0GVL6 79 aa8.82□□□□□ -1
RNF4-210ENST00000508235 A6NJY4 79 aa8.82□□□□□ -1
RNF4-210ENST00000508235 CEND1Q8N111 149 aa8.82□□□□□ -1
RNF4-210ENST00000508235 C12orf57Q99622 126 aa8.82□□□□□ -1
RNF4-210ENST00000508235 UQCR10Q9UDW1 63 aa8.82□□□□□ -1
RNF4-210ENST00000508235 RAB37Q96AX2 223 aa8.81□□□□□ -1
RNF4-210ENST00000508235 NHP2Q9NX24 153 aaKnown RBP8.81□□□□□ -1
RNF4-210ENST00000508235 A0A0B4J2C4 111 aa8.79□□□□□ -1
RNF4-210ENST00000508235 SLC25A20O43772 301 aa8.79□□□□□ -1
RNF4-210ENST00000508235 CFC1BP0CG36 223 aa8.79□□□□□ -1
RNF4-210ENST00000508235 CFC1P0CG37 223 aa8.79□□□□□ -1
RNF4-210ENST00000508235 CTAG1AP78358 180 aa8.78□□□□□ -1
RNF4-210ENST00000508235 HSD52Q0P140 79 aa8.78□□□□□ -1
RNF4-210ENST00000508235 C3orf22Q8N5N4 141 aa8.78□□□□□ -1
RNF4-210ENST00000508235 LINC00304Q8N9R0 145 aa8.78□□□□□ -1
RNF4-210ENST00000508235 ST20-AS1Q8NBB2 130 aa8.78□□□□□ -1
RNF4-210ENST00000508235 SMIM6P0DI80 62 aa8.77□□□□□ -1.01
RNF4-210ENST00000508235 BVES-AS1Q5T3Y7 98 aa8.77□□□□□ -1.01
RNF4-210ENST00000508235 HERC1Q15751 4861 aa8.77□□□□□ -1.01
RNF4-210ENST00000508235 SPRR1BP22528 89 aa8.76□□□□□ -1.01
RNF4-210ENST00000508235 SPAG11AQ6PDA7 123 aa8.76□□□□□ -1.01
RNF4-210ENST00000508235 IGLV9-49A0A0B4J1Y8 123 aa8.75□□□□□ -1.01
RNF4-210ENST00000508235 C4orf48Q5BLP8 95 aa8.75□□□□□ -1.01
RNF4-210ENST00000508235 SSBP3-AS1Q7Z2R9 100 aa8.75□□□□□ -1.01
RNF4-210ENST00000508235 H7C2G1 150 aa8.74□□□□□ -1.01
RNF4-210ENST00000508235 TSPAN13O95857 204 aa8.74□□□□□ -1.01
RNF4-210ENST00000508235 MOBPQ13875 183 aa8.74□□□□□ -1.01
RNF4-210ENST00000508235 PRO1854Q9UHT4 67 aa8.74□□□□□ -1.01
RNF4-210ENST00000508235 TEX49A0A1B0GTD5 131 aa8.73□□□□□ -1.01
RNF4-210ENST00000508235 FXYD2P54710 66 aa8.73□□□□□ -1.01
RNF4-210ENST00000508235 LINC00575Q6W349 94 aa8.73□□□□□ -1.01
RNF4-210ENST00000508235 Q8NBF4 154 aa8.73□□□□□ -1.01
RNF4-210ENST00000508235 LAMTOR3Q9UHA4 124 aa8.73□□□□□ -1.01
RNF4-210ENST00000508235 hADV29S1A0JD25 119 aa8.72□□□□□ -1.01
RNF4-210ENST00000508235 Q1RN00 199 aa8.72□□□□□ -1.01
RNF4-210ENST00000508235 C9orf153Q5TBE3 101 aa8.72□□□□□ -1.01
RNF4-210ENST00000508235 DEFB105AQ8NG35 78 aa8.72□□□□□ -1.01
RNF4-210ENST00000508235 TNXBP22105 4242 aa8.71□□□□□ -1.01
RNF4-210ENST00000508235 SNCGO76070 127 aa8.71□□□□□ -1.02
RNF4-210ENST00000508235 IGLV5-48A0A075B6I7 105 aa8.7□□□□□ -1.02
RNF4-210ENST00000508235 H0YGX0 51 aa8.69□□□□□ -1.02
RNF4-210ENST00000508235 SPINK1P00995 79 aa8.68□□□□□ -1.02
RNF4-210ENST00000508235 PRO1933Q9H354 126 aa8.68□□□□□ -1.02
RNF4-210ENST00000508235 LOC105371267A0A1B0GV96 52 aa8.67□□□□□ -1.02
RNF4-210ENST00000508235 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.67□□□□□ -1.02
RNF4-210ENST00000508235 LINC01547P58512 204 aaPredicted RBP8.66□□□□□ -1.02
RNF4-210ENST00000508235 PRR4Q16378 134 aa8.65□□□□□ -1.02
RNF4-210ENST00000508235 Q6ZQY7 126 aa8.65□□□□□ -1.02
RNF4-210ENST00000508235 RPS29P62273 56 aaKnown RBP8.64□□□□□ -1.03
RNF4-210ENST00000508235 Q8N377 158 aa8.64□□□□□ -1.03
RNF4-210ENST00000508235 PPDPFLQ8WWR9 84 aa8.64□□□□□ -1.03
RNF4-210ENST00000508235 TSTD3H0UI37 97 aa8.63□□□□□ -1.03
RNF4-210ENST00000508235 M0R143 59 aa8.63□□□□□ -1.03
RNF4-210ENST00000508235 A0A1B0GX51 115 aa8.62□□□□□ -1.03
RNF4-210ENST00000508235 F8WEM9 126 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms