RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 TEP1Q99973 2627 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-210ENST00000508216 HECTD1Q9ULT8 2610 aa6.84□□□□□ -1.31
PDLIM5-210ENST00000508216 CNOT1A5YKK6 2376 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-210ENST00000508216 ZNF462Q96JM2 2506 aa6.84□□□□□ -1.31
PDLIM5-210ENST00000508216 A0A1B0GUV1 79 aa6.84□□□□□ -1.31
PDLIM5-210ENST00000508216 IGKV3-20P01619 116 aa6.84□□□□□ -1.31
PDLIM5-210ENST00000508216 HRES1P13985 223 aa6.84□□□□□ -1.31
PDLIM5-210ENST00000508216 IGKV3-7A0A075B6H7 116 aa6.83□□□□□ -1.32
PDLIM5-210ENST00000508216 ZNF861PO60384 105 aa6.83□□□□□ -1.32
PDLIM5-210ENST00000508216 AHCTF1Q8WYP5 2266 aa6.83□□□□□ -1.32
PDLIM5-210ENST00000508216 AKAP13Q12802 2813 aa6.82□□□□□ -1.32
PDLIM5-210ENST00000508216 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
PDLIM5-210ENST00000508216 KRTAP16-1A8MUX0 517 aa6.82□□□□□ -1.32
PDLIM5-210ENST00000508216 ANKRD17O75179 2603 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-210ENST00000508216 P0C880 135 aa6.81□□□□□ -1.32
PDLIM5-210ENST00000508216 DEFB119Q8N690 84 aa6.81□□□□□ -1.32
PDLIM5-210ENST00000508216 MYO18BQ8IUG5 2567 aa6.8□□□□□ -1.32
PDLIM5-210ENST00000508216 J3QKU1 62 aa6.8□□□□□ -1.32
PDLIM5-210ENST00000508216 MSMBP08118 114 aa6.8□□□□□ -1.32
PDLIM5-210ENST00000508216 Q8N377 158 aa6.8□□□□□ -1.32
PDLIM5-210ENST00000508216 LAMA5O15230 3695 aa6.79□□□□□ -1.32
PDLIM5-210ENST00000508216 UQCR11O14957 56 aa6.79□□□□□ -1.32
PDLIM5-210ENST00000508216 C1orf137Q5JT78 98 aa6.79□□□□□ -1.32
PDLIM5-210ENST00000508216 CDK2AP2O75956 126 aa6.77□□□□□ -1.33
PDLIM5-210ENST00000508216 INSP01308 110 aa6.77□□□□□ -1.33
PDLIM5-210ENST00000508216 LINC00483Q53H64 154 aa6.77□□□□□ -1.33
PDLIM5-210ENST00000508216 TP53AIP1Q9HCN2 124 aa6.77□□□□□ -1.33
PDLIM5-210ENST00000508216 A8MWP4 228 aa6.76□□□□□ -1.33
PDLIM5-210ENST00000508216 WFDC13Q8IUB5 93 aa6.76□□□□□ -1.33
PDLIM5-210ENST00000508216 PIEZO2Q9H5I5 2752 aa6.76□□□□□ -1.33
PDLIM5-210ENST00000508216 KRTAP1-3Q8IUG1 177 aa6.75□□□□□ -1.33
PDLIM5-210ENST00000508216 CACNA1EQ15878 2313 aa6.75□□□□□ -1.33
PDLIM5-210ENST00000508216 FREM2Q5SZK8 3169 aa6.75□□□□□ -1.33
PDLIM5-210ENST00000508216 PTPN13Q12923 2485 aa6.75□□□□□ -1.33
PDLIM5-210ENST00000508216 TEX15Q9BXT5 2789 aa6.74□□□□□ -1.33
PDLIM5-210ENST00000508216 C7orf33Q8WU49 177 aa6.74□□□□□ -1.33
PDLIM5-210ENST00000508216 SDK1Q7Z5N4 2213 aa6.73□□□□□ -1.33
PDLIM5-210ENST00000508216 KALRNO60229 2985 aa6.73□□□□□ -1.33
PDLIM5-210ENST00000508216 IGKV3OR2-268A0A0C4DH90 116 aa6.73□□□□□ -1.33
PDLIM5-210ENST00000508216 DHRS4-AS1Q9P1J3 65 aa6.73□□□□□ -1.33
PDLIM5-210ENST00000508216 MYO9AB2RTY4 2548 aa6.72□□□□□ -1.33
PDLIM5-210ENST00000508216 SEC61BP60468 96 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-210ENST00000508216 HTN1P15515 57 aa6.72□□□□□ -1.33
PDLIM5-210ENST00000508216 DOPEY1Q5JWR5 2465 aa6.71□□□□□ -1.33
PDLIM5-210ENST00000508216 SPTA1P02549 2419 aa6.71□□□□□ -1.34
PDLIM5-210ENST00000508216 TRGV1A0A0A0MS02 117 aa6.7□□□□□ -1.34
PDLIM5-210ENST00000508216 WFDC10BQ8IUB3 73 aa6.7□□□□□ -1.34
PDLIM5-210ENST00000508216 CFAP46Q8IYW2 2715 aa6.69□□□□□ -1.34
PDLIM5-210ENST00000508216 A0A1B0GU69 56 aa6.69□□□□□ -1.34
PDLIM5-210ENST00000508216 CELSR3Q9NYQ7 3312 aa6.67□□□□□ -1.34
PDLIM5-210ENST00000508216 IGLV5-52A0A0A0MRZ9 124 aa6.67□□□□□ -1.34
PDLIM5-210ENST00000508216 IGKV2-24A0A0C4DH68 120 aa6.67□□□□□ -1.34
PDLIM5-210ENST00000508216 DMAC1Q96GE9 116 aa6.67□□□□□ -1.34
PDLIM5-210ENST00000508216 WNK1Q9H4A3 2382 aa6.67□□□□□ -1.34
PDLIM5-210ENST00000508216 ABCA12Q86UK0 2595 aa6.67□□□□□ -1.34
PDLIM5-210ENST00000508216 IGLV10-54A0A075B6I4 117 aa6.67□□□□□ -1.34
PDLIM5-210ENST00000508216 DEFB124Q8NES8 71 aa6.67□□□□□ -1.34
PDLIM5-210ENST00000508216 C20orf166-AS1Q96NR2 134 aa6.67□□□□□ -1.34
PDLIM5-210ENST00000508216 PKDREJQ9NTG1 2253 aa6.66□□□□□ -1.34
PDLIM5-210ENST00000508216 IGLV8-61A0A075B6I0 122 aa6.65□□□□□ -1.34
PDLIM5-210ENST00000508216 A6NDX4 124 aa6.65□□□□□ -1.34
PDLIM5-210ENST00000508216 KRTAP9-9Q9BYP9 154 aa6.65□□□□□ -1.34
PDLIM5-210ENST00000508216 KRTAP9-4Q9BYQ2 154 aa6.65□□□□□ -1.34
PDLIM5-210ENST00000508216 LAMA1P25391 3075 aa6.64□□□□□ -1.35
PDLIM5-210ENST00000508216 INAFM1C9JVW0 142 aa6.64□□□□□ -1.35
PDLIM5-210ENST00000508216 ACYP2P14621 99 aa6.64□□□□□ -1.35
PDLIM5-210ENST00000508216 DEFB116Q30KQ4 102 aa6.64□□□□□ -1.35
PDLIM5-210ENST00000508216 KRTAP26-1Q6PEX3 210 aa6.64□□□□□ -1.35
PDLIM5-210ENST00000508216 UNQ6190/PRO20217Q6UXQ8 127 aa6.64□□□□□ -1.35
PDLIM5-210ENST00000508216 DEFB131AP59861 70 aa6.64□□□□□ -1.35
PDLIM5-210ENST00000508216 A8MUU9 505 aa6.63□□□□□ -1.35
PDLIM5-210ENST00000508216 LYNX1G3V0Z9 82 aa6.63□□□□□ -1.35
PDLIM5-210ENST00000508216 PCOTHQ58A44 107 aa6.63□□□□□ -1.35
PDLIM5-210ENST00000508216 SPTAN1Q13813 2472 aaKnown RBP6.63□□□□□ -1.35
PDLIM5-210ENST00000508216 COL12A1Q99715 3063 aa6.62□□□□□ -1.35
PDLIM5-210ENST00000508216 LINC00472Q9H8W2 130 aa6.62□□□□□ -1.35
PDLIM5-210ENST00000508216 RELNP78509 3460 aa6.62□□□□□ -1.35
PDLIM5-210ENST00000508216 UBR5O95071 2799 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-210ENST00000508216 FBN2P35556 2912 aa6.62□□□□□ -1.35
PDLIM5-210ENST00000508216 MMP24-AS1A0A0U1RRL7 71 aa6.61□□□□□ -1.35
PDLIM5-210ENST00000508216 APC2O95996 2303 aa6.61□□□□□ -1.35
PDLIM5-210ENST00000508216 ALMS1Q8TCU4 4167 aa6.61□□□□□ -1.35
PDLIM5-210ENST00000508216 ACACAQ13085 2346 aa6.6□□□□□ -1.35
PDLIM5-210ENST00000508216 C2CD3Q4AC94 2353 aa6.6□□□□□ -1.35
PDLIM5-210ENST00000508216 LYNX1P0DP58 116 aa6.6□□□□□ -1.35
PDLIM5-210ENST00000508216 DEFB109BQ30KR1 87 aa6.6□□□□□ -1.35
PDLIM5-210ENST00000508216 Q6ZRX8 168 aa6.6□□□□□ -1.35
PDLIM5-210ENST00000508216 NUPR2A6NF83 97 aa6.59□□□□□ -1.35
PDLIM5-210ENST00000508216 CMC4P56277 68 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-210ENST00000508216 EGFEM1PQ0D2K5 195 aa6.59□□□□□ -1.35
PDLIM5-210ENST00000508216 CLPSL2Q6UWE3 100 aa6.59□□□□□ -1.35
PDLIM5-210ENST00000508216 C16orf74Q96GX8 76 aa6.59□□□□□ -1.35
PDLIM5-210ENST00000508216 C6orf48Q9UBA6 75 aa6.59□□□□□ -1.35
PDLIM5-210ENST00000508216 ITPR3Q14573 2671 aa6.59□□□□□ -1.35
PDLIM5-210ENST00000508216 CASC10Q5T4H9 136 aa6.59□□□□□ -1.35
PDLIM5-210ENST00000508216 RPL37AP8A6NKH3 93 aa6.58□□□□□ -1.36
PDLIM5-210ENST00000508216 PATE3B3GLJ2 98 aa6.58□□□□□ -1.36
PDLIM5-210ENST00000508216 KRTAP4-16G5E9R7 235 aaPredicted RBP6.58□□□□□ -1.36
PDLIM5-210ENST00000508216 ANGP03950 147 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-210ENST00000508216 CHTF8P0CG12 524 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms