RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 HERVK_113P61574 105 aa6.41□□□□□ -1.38
PTPN13-207ENST00000508063 C3orf22Q8N5N4 141 aa6.41□□□□□ -1.38
PTPN13-207ENST00000508063 RETNLBQ9BQ08 111 aa6.41□□□□□ -1.38
PTPN13-207ENST00000508063 IGLV7-46A0A075B6I9 117 aa6.4□□□□□ -1.38
PTPN13-207ENST00000508063 SMIM6P0DI80 62 aa6.4□□□□□ -1.38
PTPN13-207ENST00000508063 TPRXLQ17RH7 258 aa6.4□□□□□ -1.38
PTPN13-207ENST00000508063 SERF1AO75920 110 aa6.39□□□□□ -1.39
PTPN13-207ENST00000508063 DPM2O94777 84 aa6.39□□□□□ -1.39
PTPN13-207ENST00000508063 FABP4P15090 132 aa6.39□□□□□ -1.39
PTPN13-207ENST00000508063 NMUP48645 174 aa6.39□□□□□ -1.39
PTPN13-207ENST00000508063 LCE1DQ5T752 114 aa6.39□□□□□ -1.39
PTPN13-207ENST00000508063 SMCR5Q8TEV8 140 aa6.39□□□□□ -1.39
PTPN13-207ENST00000508063 HIST1H2BLQ99880 126 aa6.39□□□□□ -1.39
PTPN13-207ENST00000508063 MIEN1Q9BRT3 115 aa6.39□□□□□ -1.39
PTPN13-207ENST00000508063 LOC107984156A0A0G2JMH3 177 aa6.38□□□□□ -1.39
PTPN13-207ENST00000508063 TRBV10-3A0A0K0K1G6 114 aa6.38□□□□□ -1.39
PTPN13-207ENST00000508063 TRBV10-2A0A0K0K1G8 114 aa6.38□□□□□ -1.39
PTPN13-207ENST00000508063 J3QQQ9 107 aa6.38□□□□□ -1.39
PTPN13-207ENST00000508063 LGALS3P17931 250 aaKnown RBP6.38□□□□□ -1.39
PTPN13-207ENST00000508063 ARL17AQ8IVW1 177 aa6.38□□□□□ -1.39
PTPN13-207ENST00000508063 KRTAP9-7A8MTY7 169 aa6.37□□□□□ -1.39
PTPN13-207ENST00000508063 KRTAP4-16G5E9R7 235 aaPredicted RBP6.37□□□□□ -1.39
PTPN13-207ENST00000508063 IGKCP01834 107 aa6.37□□□□□ -1.39
PTPN13-207ENST00000508063 TSPEAR-AS2P59090 65 aa6.37□□□□□ -1.39
PTPN13-207ENST00000508063 MUC2Q02817 5179 aa6.37□□□□□ -1.39
PTPN13-207ENST00000508063 DDTP30046 118 aa6.36□□□□□ -1.39
PTPN13-207ENST00000508063 FP248Q71RG6 208 aaPredicted RBP6.36□□□□□ -1.39
PTPN13-207ENST00000508063 LINC00518Q8N0U6 118 aa6.36□□□□□ -1.39
PTPN13-207ENST00000508063 SPANXB1Q9NS25 103 aaPredicted RBP6.36□□□□□ -1.39
PTPN13-207ENST00000508063 B5MCH6 92 aa6.35□□□□□ -1.39
PTPN13-207ENST00000508063 NDUFC2O95298 119 aa6.35□□□□□ -1.39
PTPN13-207ENST00000508063 SPINK1P00995 79 aa6.35□□□□□ -1.39
PTPN13-207ENST00000508063 LINC00483Q53H64 154 aa6.35□□□□□ -1.39
PTPN13-207ENST00000508063 S100A7L2Q5SY68 101 aa6.35□□□□□ -1.39
PTPN13-207ENST00000508063 DAND5Q8N907 189 aa6.35□□□□□ -1.39
PTPN13-207ENST00000508063 Q8NBF4 154 aa6.35□□□□□ -1.39
PTPN13-207ENST00000508063 PPDPFQ9H3Y8 114 aa6.35□□□□□ -1.39
PTPN13-207ENST00000508063 C12orf57Q99622 126 aa6.34□□□□□ -1.39
PTPN13-207ENST00000508063 CBY1Q9Y3M2 126 aa6.34□□□□□ -1.39
PTPN13-207ENST00000508063 JOSD1Q15040 202 aaPredicted RBP6.33□□□□□ -1.4
PTPN13-207ENST00000508063 GAGE2AQ6NT46 116 aa6.33□□□□□ -1.4
PTPN13-207ENST00000508063 PMCHL2Q9BQD1 86 aa6.33□□□□□ -1.4
PTPN13-207ENST00000508063 PYY3Q5JQD4 70 aa6.32□□□□□ -1.4
PTPN13-207ENST00000508063 Q6ZRX8 168 aa6.32□□□□□ -1.4
PTPN13-207ENST00000508063 SSBP3-AS1Q7Z2R9 100 aa6.32□□□□□ -1.4
PTPN13-207ENST00000508063 TRAV23DV6A0A075B6W5 121 aa6.31□□□□□ -1.4
PTPN13-207ENST00000508063 E9PLD3 99 aa6.31□□□□□ -1.4
PTPN13-207ENST00000508063 IGLV6-57P01721 117 aa6.31□□□□□ -1.4
PTPN13-207ENST00000508063 HINT1P49773 126 aaPredicted RBP6.31□□□□□ -1.4
PTPN13-207ENST00000508063 IGLV9-49A0A0B4J1Y8 123 aa6.3□□□□□ -1.4
PTPN13-207ENST00000508063 RPS29P62273 56 aaKnown RBP6.3□□□□□ -1.4
PTPN13-207ENST00000508063 MOBPQ13875 183 aa6.3□□□□□ -1.4
PTPN13-207ENST00000508063 Q9BRP9 147 aa6.3□□□□□ -1.4
PTPN13-207ENST00000508063 A0A0J9YXY3 114 aa6.29□□□□□ -1.4
PTPN13-207ENST00000508063 ERC2-IT1O76042 136 aa6.29□□□□□ -1.4
PTPN13-207ENST00000508063 KRTDAPP60985 99 aa6.29□□□□□ -1.4
PTPN13-207ENST00000508063 MUC17Q685J3 4493 aa6.28□□□□□ -1.4
PTPN13-207ENST00000508063 C20orf202A1L168 122 aa6.28□□□□□ -1.4
PTPN13-207ENST00000508063 SYS1-DBNDD2H3BUS1 97 aa6.28□□□□□ -1.4
PTPN13-207ENST00000508063 ZNF73O43830 326 aaPredicted RBP6.28□□□□□ -1.4
PTPN13-207ENST00000508063 SCGB1D1O95968 90 aa6.28□□□□□ -1.4
PTPN13-207ENST00000508063 NPC2P61916 151 aa6.28□□□□□ -1.4
PTPN13-207ENST00000508063 ADAMTSL4-AS1Q5T5F5 129 aa6.27□□□□□ -1.41
PTPN13-207ENST00000508063 SOSTDC1Q6X4U4 206 aa6.27□□□□□ -1.41
PTPN13-207ENST00000508063 SLC25A20O43772 301 aa6.26□□□□□ -1.41
PTPN13-207ENST00000508063 TIMM17BO60830 172 aa6.26□□□□□ -1.41
PTPN13-207ENST00000508063 C3orf79P0CE67 100 aa6.26□□□□□ -1.41
PTPN13-207ENST00000508063 KRTAP13-3Q3SY46 172 aa6.26□□□□□ -1.41
PTPN13-207ENST00000508063 C9orf153Q5TBE3 101 aa6.26□□□□□ -1.41
PTPN13-207ENST00000508063 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
PTPN13-207ENST00000508063 SPANXCQ9NY87 97 aa6.26□□□□□ -1.41
PTPN13-207ENST00000508063 PET117Q6UWS5 81 aa6.25□□□□□ -1.41
PTPN13-207ENST00000508063 Q8N377 158 aa6.25□□□□□ -1.41
PTPN13-207ENST00000508063 OR13C6PQ8NH95 151 aa6.25□□□□□ -1.41
PTPN13-207ENST00000508063 LINC00308Q8TCZ7 52 aa6.25□□□□□ -1.41
PTPN13-207ENST00000508063 LINC01545Q5VT33 79 aa6.24□□□□□ -1.41
PTPN13-207ENST00000508063 SLC25A34Q6PIV7 304 aa6.24□□□□□ -1.41
PTPN13-207ENST00000508063 FAT4Q6V0I7 4981 aa6.23□□□□□ -1.41
PTPN13-207ENST00000508063 C9orf118A6NHY6 69 aa6.23□□□□□ -1.41
PTPN13-207ENST00000508063 ZNF815PA8K554 130 aa6.23□□□□□ -1.41
PTPN13-207ENST00000508063 TSTD3H0UI37 97 aa6.23□□□□□ -1.41
PTPN13-207ENST00000508063 SEC61BP60468 96 aaKnown RBP6.23□□□□□ -1.41
PTPN13-207ENST00000508063 LITAFQ99732 161 aa6.23□□□□□ -1.41
PTPN13-207ENST00000508063 SPANXDQ9BXN6 97 aa6.23□□□□□ -1.41
PTPN13-207ENST00000508063 DHRS4-AS1Q9P1J3 65 aa6.23□□□□□ -1.41
PTPN13-207ENST00000508063 ASB16-AS1Q495Z4 193 aa6.22□□□□□ -1.41
PTPN13-207ENST00000508063 VAMP8Q9BV40 100 aa6.22□□□□□ -1.41
PTPN13-207ENST00000508063 PCP4L1A6NKN8 68 aa6.21□□□□□ -1.42
PTPN13-207ENST00000508063 ST20-AS1Q8NBB2 130 aa6.21□□□□□ -1.42
PTPN13-207ENST00000508063 COPS9Q8WXC6 57 aa6.21□□□□□ -1.42
PTPN13-207ENST00000508063 HSBP1L1C9JCN9 74 aa6.19□□□□□ -1.42
PTPN13-207ENST00000508063 SPRR1BP22528 89 aa6.19□□□□□ -1.42
PTPN13-207ENST00000508063 COX7BP24311 80 aa6.19□□□□□ -1.42
PTPN13-207ENST00000508063 LIMD2Q9BT23 127 aa6.19□□□□□ -1.42
PTPN13-207ENST00000508063 LAMTOR3Q9UHA4 124 aa6.19□□□□□ -1.42
PTPN13-207ENST00000508063 ELOF1P60002 83 aaKnown RBP6.18□□□□□ -1.42
PTPN13-207ENST00000508063 SCGB1D4Q6XE38 83 aa6.18□□□□□ -1.42
PTPN13-207ENST00000508063 KRTAP4-9Q9BYQ8 210 aa6.18□□□□□ -1.42
PTPN13-207ENST00000508063 PRO1933Q9H354 126 aa6.18□□□□□ -1.42
PTPN13-207ENST00000508063 PAM16Q9Y3D7 125 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms