RNA–Protein interactions for RNA: ENST00000507588.1

FGFR3-209, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best)

Gene FGFR3, Length 336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-209ENST00000507588 ADAMTSL4-AS1Q5T5F5 129 aa10.64□□□□□ -0.71
FGFR3-209ENST00000507588 GAGE2AQ6NT46 116 aa10.64□□□□□ -0.71
FGFR3-209ENST00000507588 HIST1H2BHQ93079 126 aa10.64□□□□□ -0.71
FGFR3-209ENST00000507588 HIST1H2BNQ99877 126 aa10.64□□□□□ -0.71
FGFR3-209ENST00000507588 HIST1H2BMQ99879 126 aa10.64□□□□□ -0.71
FGFR3-209ENST00000507588 FAT4Q6V0I7 4981 aa10.63□□□□□ -0.71
FGFR3-209ENST00000507588 EIF4EBP3O60516 100 aaPredicted RBP10.63□□□□□ -0.71
FGFR3-209ENST00000507588 SPINK1P00995 79 aa10.63□□□□□ -0.71
FGFR3-209ENST00000507588 NPC2P61916 151 aa10.61□□□□□ -0.71
FGFR3-209ENST00000507588 RPS29P62273 56 aaKnown RBP10.61□□□□□ -0.71
FGFR3-209ENST00000507588 JOSD1Q15040 202 aaPredicted RBP10.61□□□□□ -0.71
FGFR3-209ENST00000507588 LINC01545Q5VT33 79 aa10.61□□□□□ -0.71
FGFR3-209ENST00000507588 ZNF73O43830 326 aaPredicted RBP10.6□□□□□ -0.71
FGFR3-209ENST00000507588 MOBPQ13875 183 aa10.6□□□□□ -0.71
FGFR3-209ENST00000507588 LITAFQ99732 161 aa10.6□□□□□ -0.71
FGFR3-209ENST00000507588 TIMM17BO60830 172 aa10.59□□□□□ -0.71
FGFR3-209ENST00000507588 SSBP3-AS1Q7Z2R9 100 aa10.59□□□□□ -0.71
FGFR3-209ENST00000507588 CBY1Q9Y3M2 126 aa10.59□□□□□ -0.71
FGFR3-209ENST00000507588 IGLV9-49A0A0B4J1Y8 123 aa10.58□□□□□ -0.72
FGFR3-209ENST00000507588 PET117Q6UWS5 81 aa10.58□□□□□ -0.72
FGFR3-209ENST00000507588 SPANXCQ9NY87 97 aa10.58□□□□□ -0.72
FGFR3-209ENST00000507588 LINC00308Q8TCZ7 52 aa10.57□□□□□ -0.72
FGFR3-209ENST00000507588 KRTAP13-3Q3SY46 172 aa10.56□□□□□ -0.72
FGFR3-209ENST00000507588 C5orf52A6NGY3 159 aa10.55□□□□□ -0.72
FGFR3-209ENST00000507588 Q8N377 158 aa10.54□□□□□ -0.72
FGFR3-209ENST00000507588 ZNF815PA8K554 130 aa10.53□□□□□ -0.72
FGFR3-209ENST00000507588 LCE2AQ5TA79 106 aaPredicted RBP10.53□□□□□ -0.72
FGFR3-209ENST00000507588 C3orf79P0CE67 100 aa10.52□□□□□ -0.73
FGFR3-209ENST00000507588 HINT1P49773 126 aaPredicted RBP10.52□□□□□ -0.73
FGFR3-209ENST00000507588 COA6Q5JTJ3 125 aaKnown RBP10.52□□□□□ -0.73
FGFR3-209ENST00000507588 SPANXDQ9BXN6 97 aa10.51□□□□□ -0.73
FGFR3-209ENST00000507588 ST20-AS1Q8NBB2 130 aa10.5□□□□□ -0.73
FGFR3-209ENST00000507588 TTTY13Q9BZ97 58 aa10.5□□□□□ -0.73
FGFR3-209ENST00000507588 C9orf153Q5TBE3 101 aa10.49□□□□□ -0.73
FGFR3-209ENST00000507588 SLC25A20O43772 301 aa10.48□□□□□ -0.73
FGFR3-209ENST00000507588 SPRR1BP22528 89 aa10.48□□□□□ -0.73
FGFR3-209ENST00000507588 OR13C6PQ8NH95 151 aa10.48□□□□□ -0.73
FGFR3-209ENST00000507588 DHRS4-AS1Q9P1J3 65 aa10.47□□□□□ -0.73
FGFR3-209ENST00000507588 ASB16-AS1Q495Z4 193 aa10.46□□□□□ -0.73
FGFR3-209ENST00000507588 LINC00518Q8N0U6 118 aa10.46□□□□□ -0.73
FGFR3-209ENST00000507588 ELOF1P60002 83 aaKnown RBP10.45□□□□□ -0.74
FGFR3-209ENST00000507588 KRTDAPP60985 99 aa10.45□□□□□ -0.74
FGFR3-209ENST00000507588 SLC25A34Q6PIV7 304 aa10.44□□□□□ -0.74
FGFR3-209ENST00000507588 C20orf202A1L168 122 aa10.43□□□□□ -0.74
FGFR3-209ENST00000507588 COX7BP24311 80 aa10.41□□□□□ -0.74
FGFR3-209ENST00000507588 C6orf99Q4VX62 202 aa10.41□□□□□ -0.74
FGFR3-209ENST00000507588 ANKRD39Q53RE8 183 aa10.41□□□□□ -0.74
FGFR3-209ENST00000507588 SCGB1D4Q6XE38 83 aa10.41□□□□□ -0.74
FGFR3-209ENST00000507588 COPS9Q8WXC6 57 aa10.4□□□□□ -0.74
FGFR3-209ENST00000507588 TRBV7-6A0A0J9YX20 115 aa10.39□□□□□ -0.75
FGFR3-209ENST00000507588 IFITM1P13164 125 aa10.39□□□□□ -0.75
FGFR3-209ENST00000507588 AKR1D1P51857 326 aa10.38□□□□□ -0.75
FGFR3-209ENST00000507588 SEC61BP60468 96 aaKnown RBP10.38□□□□□ -0.75
FGFR3-209ENST00000507588 Q6ZVH6 145 aa10.38□□□□□ -0.75
FGFR3-209ENST00000507588 LAMTOR3Q9UHA4 124 aa10.38□□□□□ -0.75
FGFR3-209ENST00000507588 XP32Q5T750 250 aa10.37□□□□□ -0.75
FGFR3-209ENST00000507588 LIMD2Q9BT23 127 aa10.37□□□□□ -0.75
FGFR3-209ENST00000507588 ATOH7Q8N100 152 aa10.35□□□□□ -0.75
FGFR3-209ENST00000507588 A0A1B0GWB2 263 aa10.34□□□□□ -0.75
FGFR3-209ENST00000507588 PCP2Q8IVA1 136 aa10.34□□□□□ -0.75
FGFR3-209ENST00000507588 KRTAP4-1Q9BYQ7 146 aa10.33□□□□□ -0.76
FGFR3-209ENST00000507588 TEX49A0A1B0GTD5 131 aa10.32□□□□□ -0.76
FGFR3-209ENST00000507588 TAL2Q16559 108 aa10.32□□□□□ -0.76
FGFR3-209ENST00000507588 KRTAP9-2Q9BYQ4 174 aa10.32□□□□□ -0.76
FGFR3-209ENST00000507588 SNRPEP62304 92 aaKnown RBP10.31□□□□□ -0.76
FGFR3-209ENST00000507588 CD164Q04900 197 aa10.31□□□□□ -0.76
FGFR3-209ENST00000507588 MUSTN1Q8IVN3 82 aa10.31□□□□□ -0.76
FGFR3-209ENST00000507588 IGLV5-48A0A075B6I7 105 aa10.3□□□□□ -0.76
FGFR3-209ENST00000507588 A6NDN8 102 aa10.3□□□□□ -0.76
FGFR3-209ENST00000507588 Q1RN00 199 aa10.3□□□□□ -0.76
FGFR3-209ENST00000507588 HRCT1Q6UXD1 115 aa10.3□□□□□ -0.76
FGFR3-209ENST00000507588 LINC01547P58512 204 aaPredicted RBP10.29□□□□□ -0.76
FGFR3-209ENST00000507588 PRO1933Q9H354 126 aa10.29□□□□□ -0.76
FGFR3-209ENST00000507588 TRAV13-2A0A0B4J235 113 aa10.28□□□□□ -0.76
FGFR3-209ENST00000507588 A4D1N5 150 aa10.28□□□□□ -0.76
FGFR3-209ENST00000507588 SMIM29Q86T20 159 aa10.28□□□□□ -0.76
FGFR3-209ENST00000507588 DEFB105AQ8NG35 78 aa10.28□□□□□ -0.76
FGFR3-209ENST00000507588 Q5XG85 94 aa10.26□□□□□ -0.77
FGFR3-209ENST00000507588 HIST3H2BBQ8N257 126 aa10.25□□□□□ -0.77
FGFR3-209ENST00000507588 NHP2Q9NX24 153 aaKnown RBP10.25□□□□□ -0.77
FGFR3-209ENST00000507588 SMIM11BQ8TCY0 68 aa10.24□□□□□ -0.77
FGFR3-209ENST00000507588 HIST1H2BLQ99880 126 aa10.24□□□□□ -0.77
FGFR3-209ENST00000507588 H7C2G1 150 aa10.23□□□□□ -0.77
FGFR3-209ENST00000507588 S100A2P29034 98 aa10.2□□□□□ -0.78
FGFR3-209ENST00000507588 HSBP1L1C9JCN9 74 aa10.18□□□□□ -0.78
FGFR3-209ENST00000507588 C9orf92A6NGG3 77 aa10.17□□□□□ -0.78
FGFR3-209ENST00000507588 A0A0G2JQZ4 141 aa10.15□□□□□ -0.78
FGFR3-209ENST00000507588 C1orf195Q5TG92 126 aa10.15□□□□□ -0.78
FGFR3-209ENST00000507588 VAMP3Q15836 100 aa10.14□□□□□ -0.79
FGFR3-209ENST00000507588 LINC00575Q6W349 94 aa10.14□□□□□ -0.79
FGFR3-209ENST00000507588 PCOTHQ58A44 107 aa10.13□□□□□ -0.79
FGFR3-209ENST00000507588 S100A6P06703 90 aa10.11□□□□□ -0.79
FGFR3-209ENST00000507588 S100A1P23297 94 aa10.11□□□□□ -0.79
FGFR3-209ENST00000507588 F8WEM9 126 aa10.1□□□□□ -0.79
FGFR3-209ENST00000507588 KRTAP19-2Q3LHN2 52 aa10.1□□□□□ -0.79
FGFR3-209ENST00000507588 LCE2CQ5TA81 110 aa10.1□□□□□ -0.79
FGFR3-209ENST00000507588 Q6ZQY7 126 aa10.1□□□□□ -0.79
FGFR3-209ENST00000507588 hADV29S1A0JD25 119 aa10.09□□□□□ -0.79
FGFR3-209ENST00000507588 IGLV8-61A0A075B6I0 122 aa10.08□□□□□ -0.8
FGFR3-209ENST00000507588 TCL1BO95988 128 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms