RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 MYCBP2O75592 4640 aa5.44□□□□□ -1.54
SCAMP1-202ENST00000506858 TRBV10-3A0A0K0K1G6 114 aa5.44□□□□□ -1.54
SCAMP1-202ENST00000506858 M0R378 163 aa5.44□□□□□ -1.54
SCAMP1-202ENST00000506858 LBHQ53QV2 105 aaPredicted RBP5.44□□□□□ -1.54
SCAMP1-202ENST00000506858 HIST1H4GQ99525 98 aa5.44□□□□□ -1.54
SCAMP1-202ENST00000506858 IGLV1-50A0A075B6I6 118 aa5.43□□□□□ -1.54
SCAMP1-202ENST00000506858 SMIM6P0DI80 62 aa5.43□□□□□ -1.54
SCAMP1-202ENST00000506858 C12orf57Q99622 126 aa5.43□□□□□ -1.54
SCAMP1-202ENST00000506858 OR13C6PQ8NH95 151 aa5.42□□□□□ -1.54
SCAMP1-202ENST00000506858 SPANXB1Q9NS25 103 aaPredicted RBP5.42□□□□□ -1.54
SCAMP1-202ENST00000506858 A4D1N5 150 aa5.41□□□□□ -1.54
SCAMP1-202ENST00000506858 LINC00337Q8N6G1 96 aa5.41□□□□□ -1.54
SCAMP1-202ENST00000506858 FAT3Q8TDW7 4589 aa5.41□□□□□ -1.54
SCAMP1-202ENST00000506858 NDUFC2O95298 119 aa5.41□□□□□ -1.54
SCAMP1-202ENST00000506858 PLA2G1BP04054 148 aaKnown RBP5.41□□□□□ -1.54
SCAMP1-202ENST00000506858 IFITM1P13164 125 aa5.41□□□□□ -1.54
SCAMP1-202ENST00000506858 DDTP30046 118 aa5.41□□□□□ -1.54
SCAMP1-202ENST00000506858 HIGD1BQ9P298 99 aa5.41□□□□□ -1.54
SCAMP1-202ENST00000506858 UQCR10Q9UDW1 63 aa5.41□□□□□ -1.54
SCAMP1-202ENST00000506858 KRTAP9-7A8MTY7 169 aa5.4□□□□□ -1.55
SCAMP1-202ENST00000506858 S100A7L2Q5SY68 101 aa5.4□□□□□ -1.55
SCAMP1-202ENST00000506858 Q6ZVH6 145 aa5.4□□□□□ -1.55
SCAMP1-202ENST00000506858 LINC00518Q8N0U6 118 aa5.4□□□□□ -1.55
SCAMP1-202ENST00000506858 TMEM126AQ9H061 195 aa5.4□□□□□ -1.55
SCAMP1-202ENST00000506858 A6NDN8 102 aa5.39□□□□□ -1.55
SCAMP1-202ENST00000506858 IGLV7-43P04211 117 aa5.39□□□□□ -1.55
SCAMP1-202ENST00000506858 FXYD2P54710 66 aa5.39□□□□□ -1.55
SCAMP1-202ENST00000506858 REG3GQ6UW15 175 aa5.39□□□□□ -1.55
SCAMP1-202ENST00000506858 PCLOQ9Y6V0 5065 aa5.38□□□□□ -1.55
SCAMP1-202ENST00000506858 TRBV10-2A0A0K0K1G8 114 aa5.38□□□□□ -1.55
SCAMP1-202ENST00000506858 IGLV6-57P01721 117 aa5.38□□□□□ -1.55
SCAMP1-202ENST00000506858 PRLHP81277 87 aa5.38□□□□□ -1.55
SCAMP1-202ENST00000506858 BCE1O60756 84 aa5.37□□□□□ -1.55
SCAMP1-202ENST00000506858 INAFM2P0DMQ5 153 aa5.37□□□□□ -1.55
SCAMP1-202ENST00000506858 FAM19A1Q7Z5A9 133 aa5.37□□□□□ -1.55
SCAMP1-202ENST00000506858 CEND1Q8N111 149 aa5.37□□□□□ -1.55
SCAMP1-202ENST00000506858 KCNQ1DNQ9H478 68 aa5.37□□□□□ -1.55
SCAMP1-202ENST00000506858 H7C2G1 150 aa5.37□□□□□ -1.55
SCAMP1-202ENST00000506858 TRAV23DV6A0A075B6W5 121 aa5.36□□□□□ -1.55
SCAMP1-202ENST00000506858 CFC1BP0CG36 223 aa5.36□□□□□ -1.55
SCAMP1-202ENST00000506858 CFC1P0CG37 223 aa5.36□□□□□ -1.55
SCAMP1-202ENST00000506858 UBE2AP49459 152 aa5.36□□□□□ -1.55
SCAMP1-202ENST00000506858 CTAG1AP78358 180 aa5.36□□□□□ -1.55
SCAMP1-202ENST00000506858 COPS9Q8WXC6 57 aa5.36□□□□□ -1.55
SCAMP1-202ENST00000506858 KRTAP4-16G5E9R7 235 aaPredicted RBP5.35□□□□□ -1.55
SCAMP1-202ENST00000506858 PRYO14603 147 aa5.35□□□□□ -1.55
SCAMP1-202ENST00000506858 HSD52Q0P140 79 aa5.35□□□□□ -1.55
SCAMP1-202ENST00000506858 KRTAP13-1Q8IUC0 172 aa5.35□□□□□ -1.55
SCAMP1-202ENST00000506858 ETDCA0A1B0GVM5 59 aa5.34□□□□□ -1.55
SCAMP1-202ENST00000506858 K7ERJ3 54 aa5.34□□□□□ -1.55
SCAMP1-202ENST00000506858 ZNF861PO60384 105 aa5.34□□□□□ -1.55
SCAMP1-202ENST00000506858 SPRR1AP35321 89 aa5.34□□□□□ -1.55
SCAMP1-202ENST00000506858 RPL13AP40429 203 aaKnown RBP5.34□□□□□ -1.55
SCAMP1-202ENST00000506858 HINT1P49773 126 aaPredicted RBP5.34□□□□□ -1.55
SCAMP1-202ENST00000506858 TAL2Q16559 108 aa5.34□□□□□ -1.55
SCAMP1-202ENST00000506858 C6orf99Q4VX62 202 aa5.34□□□□□ -1.55
SCAMP1-202ENST00000506858 SMIM11BQ8TCY0 68 aa5.34□□□□□ -1.55
SCAMP1-202ENST00000506858 HIGD2AQ9BW72 106 aa5.34□□□□□ -1.55
SCAMP1-202ENST00000506858 PPDPFQ9H3Y8 114 aa5.34□□□□□ -1.55
SCAMP1-202ENST00000506858 B5MCH6 92 aa5.34□□□□□ -1.56
SCAMP1-202ENST00000506858 ZNF73O43830 326 aaPredicted RBP5.34□□□□□ -1.56
SCAMP1-202ENST00000506858 ERC2-IT1O76042 136 aa5.34□□□□□ -1.56
SCAMP1-202ENST00000506858 BVES-AS1Q5T3Y7 98 aa5.34□□□□□ -1.56
SCAMP1-202ENST00000506858 NHP2Q9NX24 153 aaKnown RBP5.34□□□□□ -1.56
SCAMP1-202ENST00000506858 ANAPC11Q9NYG5 84 aa5.34□□□□□ -1.56
SCAMP1-202ENST00000506858 TRAV13-2A0A0B4J235 113 aa5.33□□□□□ -1.56
SCAMP1-202ENST00000506858 C9orf118A6NHY6 69 aa5.33□□□□□ -1.56
SCAMP1-202ENST00000506858 RAB37Q96AX2 223 aa5.33□□□□□ -1.56
SCAMP1-202ENST00000506858 TSTD3H0UI37 97 aa5.32□□□□□ -1.56
SCAMP1-202ENST00000506858 RPL28P46779 137 aaKnown RBP5.32□□□□□ -1.56
SCAMP1-202ENST00000506858 SPINK6Q6UWN8 80 aa5.32□□□□□ -1.56
SCAMP1-202ENST00000506858 SMCR5Q8TEV8 140 aa5.32□□□□□ -1.56
SCAMP1-202ENST00000506858 Q9BRP9 147 aa5.32□□□□□ -1.56
SCAMP1-202ENST00000506858 TNXBP22105 4242 aa5.32□□□□□ -1.56
SCAMP1-202ENST00000506858 H0Y9J4 135 aa5.31□□□□□ -1.56
SCAMP1-202ENST00000506858 DIRC1Q969H9 104 aa5.31□□□□□ -1.56
SCAMP1-202ENST00000506858 DMBT1Q9UGM3 2413 aaPredicted RBP5.3□□□□□ -1.56
SCAMP1-202ENST00000506858 A0A0B4J2C4 111 aa5.3□□□□□ -1.56
SCAMP1-202ENST00000506858 COX7BP24311 80 aa5.3□□□□□ -1.56
SCAMP1-202ENST00000506858 BATFQ16520 125 aa5.3□□□□□ -1.56
SCAMP1-202ENST00000506858 Q6ZRX8 168 aa5.3□□□□□ -1.56
SCAMP1-202ENST00000506858 ST20-AS1Q8NBB2 130 aa5.3□□□□□ -1.56
SCAMP1-202ENST00000506858 PRO1854Q9UHT4 67 aa5.3□□□□□ -1.56
SCAMP1-202ENST00000506858 PCP4L1A6NKN8 68 aa5.29□□□□□ -1.56
SCAMP1-202ENST00000506858 KRTAP1-4P0C5Y4 121 aa5.29□□□□□ -1.56
SCAMP1-202ENST00000506858 Q1RN00 199 aa5.29□□□□□ -1.56
SCAMP1-202ENST00000506858 NAA38Q9BRA0 125 aaKnown RBP5.28□□□□□ -1.56
SCAMP1-202ENST00000506858 ELOF1P60002 83 aaKnown RBP5.27□□□□□ -1.57
SCAMP1-202ENST00000506858 PRR26Q8N8Z3 221 aa5.27□□□□□ -1.57
SCAMP1-202ENST00000506858 HERC1Q15751 4861 aa5.27□□□□□ -1.57
SCAMP1-202ENST00000506858 A0A1B0GWB2 263 aa5.26□□□□□ -1.57
SCAMP1-202ENST00000506858 GAGE2AQ6NT46 116 aa5.26□□□□□ -1.57
SCAMP1-202ENST00000506858 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
SCAMP1-202ENST00000506858 A0A087X002 238 aa5.26□□□□□ -1.57
SCAMP1-202ENST00000506858 TSPAN13O95857 204 aa5.26□□□□□ -1.57
SCAMP1-202ENST00000506858 DEFB105AQ8NG35 78 aa5.26□□□□□ -1.57
SCAMP1-202ENST00000506858 SPRR4Q96PI1 79 aa5.26□□□□□ -1.57
SCAMP1-202ENST00000506858 M0R143 59 aa5.25□□□□□ -1.57
SCAMP1-202ENST00000506858 TRIAP1O43715 76 aa5.25□□□□□ -1.57
SCAMP1-202ENST00000506858 MT1HL1P0DM35 61 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms