RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 C1orf195Q5TG92 126 aa11.28□□□□□ -0.6
SQSTM1-211ENST00000506690 LCE6AA0A183 80 aa11.27□□□□□ -0.61
SQSTM1-211ENST00000506690 HIVEP2P31629 2446 aa11.26□□□□□ -0.61
SQSTM1-211ENST00000506690 EGFEM1PQ0D2K5 195 aa11.26□□□□□ -0.61
SQSTM1-211ENST00000506690 DEFB135Q30KP9 77 aa11.25□□□□□ -0.61
SQSTM1-211ENST00000506690 CAMK2N2Q96S95 79 aa11.25□□□□□ -0.61
SQSTM1-211ENST00000506690 hDV103S1A0JD37 113 aa11.24□□□□□ -0.61
SQSTM1-211ENST00000506690 IGLV5-48A0A075B6I7 105 aa11.24□□□□□ -0.61
SQSTM1-211ENST00000506690 SMIM29Q86T20 159 aa11.24□□□□□ -0.61
SQSTM1-211ENST00000506690 Q6ZRU5 148 aa11.22□□□□□ -0.61
SQSTM1-211ENST00000506690 Q8N377 158 aa11.22□□□□□ -0.61
SQSTM1-211ENST00000506690 FAM30AQ9NZY2 134 aa11.22□□□□□ -0.61
SQSTM1-211ENST00000506690 A0A1B0GW54 56 aa11.21□□□□□ -0.61
SQSTM1-211ENST00000506690 KPRPQ5T749 579 aaPredicted RBP11.21□□□□□ -0.61
SQSTM1-211ENST00000506690 V9GYY9 64 aa11.2□□□□□ -0.62
SQSTM1-211ENST00000506690 Q8NAQ8 132 aa11.2□□□□□ -0.62
SQSTM1-211ENST00000506690 OTOGQ6ZRI0 2925 aa11.2□□□□□ -0.62
SQSTM1-211ENST00000506690 INAFM1C9JVW0 142 aa11.19□□□□□ -0.62
SQSTM1-211ENST00000506690 KRTAP26-1Q6PEX3 210 aa11.19□□□□□ -0.62
SQSTM1-211ENST00000506690 HTN3P15516 51 aa11.19□□□□□ -0.62
SQSTM1-211ENST00000506690 ZCCHC13Q8WW36 166 aaKnown RBP11.18□□□□□ -0.62
SQSTM1-211ENST00000506690 DEFB105AQ8NG35 78 aa11.18□□□□□ -0.62
SQSTM1-211ENST00000506690 Q1T7F1 81 aa11.17□□□□□ -0.62
SQSTM1-211ENST00000506690 KCNQ1DNQ9H478 68 aa11.17□□□□□ -0.62
SQSTM1-211ENST00000506690 C15orf56Q8N910 161 aa11.17□□□□□ -0.62
SQSTM1-211ENST00000506690 A0A1W2PNM2 257 aa11.16□□□□□ -0.62
SQSTM1-211ENST00000506690 Q6ZRP5 223 aa11.16□□□□□ -0.62
SQSTM1-211ENST00000506690 C1orf64Q8NEQ6 169 aa11.16□□□□□ -0.62
SQSTM1-211ENST00000506690 FLNBO75369 2602 aaKnown RBP11.16□□□□□ -0.62
SQSTM1-211ENST00000506690 SPART-AS1P0CW21 52 aa11.16□□□□□ -0.62
SQSTM1-211ENST00000506690 KRTAP10-3P60369 221 aa11.16□□□□□ -0.62
SQSTM1-211ENST00000506690 APOC4P55056 127 aa11.15□□□□□ -0.63
SQSTM1-211ENST00000506690 PRR15Q8IV56 129 aa11.15□□□□□ -0.63
SQSTM1-211ENST00000506690 TNP2Q05952 138 aa11.13□□□□□ -0.63
SQSTM1-211ENST00000506690 ETDCA0A1B0GVM5 59 aa11.11□□□□□ -0.63
SQSTM1-211ENST00000506690 LRCOL1A6NCL2 159 aa11.11□□□□□ -0.63
SQSTM1-211ENST00000506690 DSCR10P59022 87 aa11.11□□□□□ -0.63
SQSTM1-211ENST00000506690 WFDC10BQ8IUB3 73 aa11.11□□□□□ -0.63
SQSTM1-211ENST00000506690 SEC61GP60059 68 aa11.1□□□□□ -0.63
SQSTM1-211ENST00000506690 Q8NBF4 154 aa11.1□□□□□ -0.63
SQSTM1-211ENST00000506690 C7orf33Q8WU49 177 aa11.1□□□□□ -0.63
SQSTM1-211ENST00000506690 VWFP04275 2813 aa11.1□□□□□ -0.63
SQSTM1-211ENST00000506690 C1orf137Q5JT78 98 aa11.09□□□□□ -0.63
SQSTM1-211ENST00000506690 SPRR4Q96PI1 79 aa11.09□□□□□ -0.63
SQSTM1-211ENST00000506690 DHRS4-AS1Q9P1J3 65 aa11.09□□□□□ -0.63
SQSTM1-211ENST00000506690 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.08□□□□□ -0.64
SQSTM1-211ENST00000506690 SERTAD4-AS1Q5TG53 156 aa11.08□□□□□ -0.64
SQSTM1-211ENST00000506690 NKAPP1Q8N9T2 125 aa11.08□□□□□ -0.64
SQSTM1-211ENST00000506690 CYP4F30PQ9H0H9 118 aa11.08□□□□□ -0.64
SQSTM1-211ENST00000506690 Q6ZRX8 168 aa11.07□□□□□ -0.64
SQSTM1-211ENST00000506690 HIVEP1P15822 2718 aa11.07□□□□□ -0.64
SQSTM1-211ENST00000506690 K7EQZ3 153 aa11.07□□□□□ -0.64
SQSTM1-211ENST00000506690 Q9BRP9 147 aa11.07□□□□□ -0.64
SQSTM1-211ENST00000506690 KRTAP4-16G5E9R7 235 aaPredicted RBP11.06□□□□□ -0.64
SQSTM1-211ENST00000506690 SYCNQ0VAF6 134 aa11.04□□□□□ -0.64
SQSTM1-211ENST00000506690 TRAV22A0A0B4J277 110 aa11.03□□□□□ -0.64
SQSTM1-211ENST00000506690 ST20-AS1Q8NBB2 130 aa11.03□□□□□ -0.64
SQSTM1-211ENST00000506690 NSD1Q96L73 2696 aaPredicted RBP11.02□□□□□ -0.65
SQSTM1-211ENST00000506690 HCG22E2RYF7 251 aa11.01□□□□□ -0.65
SQSTM1-211ENST00000506690 PSPHP1O15172 72 aa11.01□□□□□ -0.65
SQSTM1-211ENST00000506690 SPRR1AP35321 89 aa11.01□□□□□ -0.65
SQSTM1-211ENST00000506690 PMAIP1Q13794 54 aa11□□□□□ -0.65
SQSTM1-211ENST00000506690 PLA2G2DQ9UNK4 145 aa11□□□□□ -0.65
SQSTM1-211ENST00000506690 H3BNG1 76 aa10.99□□□□□ -0.65
SQSTM1-211ENST00000506690 PSCAO43653 123 aa10.99□□□□□ -0.65
SQSTM1-211ENST00000506690 IGLV1-50A0A075B6I6 118 aa10.98□□□□□ -0.65
SQSTM1-211ENST00000506690 RPL37AP8A6NKH3 93 aa10.98□□□□□ -0.65
SQSTM1-211ENST00000506690 NDUFB1O75438 58 aa10.98□□□□□ -0.65
SQSTM1-211ENST00000506690 PRR4Q16378 134 aa10.97□□□□□ -0.65
SQSTM1-211ENST00000506690 TLX1NBP0CAT3 122 aa10.97□□□□□ -0.65
SQSTM1-211ENST00000506690 BAHCC1Q9P281 2608 aa10.96□□□□□ -0.65
SQSTM1-211ENST00000506690 IGLV5-37A0A075B6J1 123 aa10.96□□□□□ -0.66
SQSTM1-211ENST00000506690 IGKV2D-24A0A075B6R9 120 aa10.96□□□□□ -0.66
SQSTM1-211ENST00000506690 F8P00451 2351 aa10.94□□□□□ -0.66
SQSTM1-211ENST00000506690 FAM168BA1KXE4 195 aa10.93□□□□□ -0.66
SQSTM1-211ENST00000506690 LINC01556Q5JQF7 62 aa10.92□□□□□ -0.66
SQSTM1-211ENST00000506690 A8MUN3 132 aa10.92□□□□□ -0.66
SQSTM1-211ENST00000506690 KRTAP7-1Q8IUC3 87 aa10.91□□□□□ -0.66
SQSTM1-211ENST00000506690 LINC00476Q8WZB0 136 aa10.9□□□□□ -0.66
SQSTM1-211ENST00000506690 MP68P56378 58 aa10.89□□□□□ -0.67
SQSTM1-211ENST00000506690 TENM1Q9UKZ4 2725 aa10.89□□□□□ -0.67
SQSTM1-211ENST00000506690 B9D2Q9BPU9 175 aa10.88□□□□□ -0.67
SQSTM1-211ENST00000506690 Q5VV11 94 aa10.88□□□□□ -0.67
SQSTM1-211ENST00000506690 ATRQ13535 2644 aa10.87□□□□□ -0.67
SQSTM1-211ENST00000506690 UBE2BP63146 152 aa10.87□□□□□ -0.67
SQSTM1-211ENST00000506690 WFDC13Q8IUB5 93 aa10.87□□□□□ -0.67
SQSTM1-211ENST00000506690 PKD1L1Q8TDX9 2849 aa10.86□□□□□ -0.67
SQSTM1-211ENST00000506690 IGFL1Q6UW32 110 aa10.86□□□□□ -0.67
SQSTM1-211ENST00000506690 DEFB116Q30KQ4 102 aa10.85□□□□□ -0.67
SQSTM1-211ENST00000506690 SPANXA2-OT1Q8N9U9 137 aa10.85□□□□□ -0.67
SQSTM1-211ENST00000506690 LINC00208Q96KT6 92 aa10.85□□□□□ -0.67
SQSTM1-211ENST00000506690 TEP1Q99973 2627 aaKnown RBP10.85□□□□□ -0.67
SQSTM1-211ENST00000506690 A0A0G2JQZ4 141 aa10.85□□□□□ -0.67
SQSTM1-211ENST00000506690 A0A1W2PNN7 141 aa10.85□□□□□ -0.67
SQSTM1-211ENST00000506690 PRB2P02812 416 aaPredicted RBP10.85□□□□□ -0.67
SQSTM1-211ENST00000506690 MRPL55Q7Z7F7 128 aaKnown RBP10.85□□□□□ -0.67
SQSTM1-211ENST00000506690 KRTAP29-1A8MX34 341 aaPredicted RBP10.84□□□□□ -0.67
SQSTM1-211ENST00000506690 A8MU10 97 aa10.83□□□□□ -0.68
SQSTM1-211ENST00000506690 Q8N9P0 234 aaPredicted RBP10.82□□□□□ -0.68
SQSTM1-211ENST00000506690 H3BPC8 53 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms