RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 A0A1B0GU69 56 aa2.11□□□□□ -2.07
SMAD1-205ENST00000506626 A8MWP4 228 aa2.11□□□□□ -2.07
SMAD1-205ENST00000506626 ZNF861PO60384 105 aa2.11□□□□□ -2.07
SMAD1-205ENST00000506626 HRES1P13985 223 aa2.11□□□□□ -2.07
SMAD1-205ENST00000506626 ACYP2P14621 99 aa2.11□□□□□ -2.07
SMAD1-205ENST00000506626 DEFB119Q8N690 84 aa2.11□□□□□ -2.07
SMAD1-205ENST00000506626 DNAH12Q6ZR08 3092 aa2.1□□□□□ -2.07
SMAD1-205ENST00000506626 CACNA1EQ15878 2313 aa2.1□□□□□ -2.07
SMAD1-205ENST00000506626 COL6A3P12111 3177 aa2.1□□□□□ -2.07
SMAD1-205ENST00000506626 IGKV3-7A0A075B6H7 116 aa2.1□□□□□ -2.07
SMAD1-205ENST00000506626 FAM168BA1KXE4 195 aa2.1□□□□□ -2.07
SMAD1-205ENST00000506626 LINC00483Q53H64 154 aa2.1□□□□□ -2.07
SMAD1-205ENST00000506626 CAMK2N2Q96S95 79 aa2.1□□□□□ -2.07
SMAD1-205ENST00000506626 RPL37AP8A6NKH3 93 aa2.09□□□□□ -2.07
SMAD1-205ENST00000506626 CHTF8P0CG12 524 aa2.09□□□□□ -2.07
SMAD1-205ENST00000506626 HTN1P15515 57 aa2.09□□□□□ -2.07
SMAD1-205ENST00000506626 WFDC10BQ8IUB3 73 aa2.09□□□□□ -2.07
SMAD1-205ENST00000506626 WFDC13Q8IUB5 93 aa2.09□□□□□ -2.07
SMAD1-205ENST00000506626 APC2O95996 2303 aa2.08□□□□□ -2.08
SMAD1-205ENST00000506626 TRGV1A0A0A0MS02 117 aa2.08□□□□□ -2.08
SMAD1-205ENST00000506626 IGKV3OR2-268A0A0C4DH90 116 aa2.08□□□□□ -2.08
SMAD1-205ENST00000506626 NUPR2A6NF83 97 aa2.08□□□□□ -2.08
SMAD1-205ENST00000506626 P0C880 135 aa2.08□□□□□ -2.08
SMAD1-205ENST00000506626 DEFB131AP59861 70 aa2.08□□□□□ -2.08
SMAD1-205ENST00000506626 C7orf33Q8WU49 177 aa2.08□□□□□ -2.08
SMAD1-205ENST00000506626 C20orf166-AS1Q96NR2 134 aa2.08□□□□□ -2.08
SMAD1-205ENST00000506626 CEP250Q9BV73 2442 aa2.08□□□□□ -2.08
SMAD1-205ENST00000506626 IGLV8-61A0A075B6I0 122 aa2.07□□□□□ -2.08
SMAD1-205ENST00000506626 LYNX1G3V0Z9 82 aa2.07□□□□□ -2.08
SMAD1-205ENST00000506626 ANGP03950 147 aaKnown RBP2.07□□□□□ -2.08
SMAD1-205ENST00000506626 CMC4P56277 68 aaPredicted RBP2.07□□□□□ -2.08
SMAD1-205ENST00000506626 LUZP6Q538Z0 58 aa2.07□□□□□ -2.08
SMAD1-205ENST00000506626 C16orf74Q96GX8 76 aa2.07□□□□□ -2.08
SMAD1-205ENST00000506626 UTRNP46939 3433 aa2.07□□□□□ -2.08
SMAD1-205ENST00000506626 KMT2BQ9UMN6 2715 aaPredicted RBP2.06□□□□□ -2.08
SMAD1-205ENST00000506626 CACNA1BQ00975 2339 aa2.06□□□□□ -2.08
SMAD1-205ENST00000506626 SPTBN2O15020 2390 aa2.06□□□□□ -2.08
SMAD1-205ENST00000506626 IGKV2-24A0A0C4DH68 120 aa2.06□□□□□ -2.08
SMAD1-205ENST00000506626 EGFEM1PQ0D2K5 195 aa2.06□□□□□ -2.08
SMAD1-205ENST00000506626 CASC10Q5T4H9 136 aa2.06□□□□□ -2.08
SMAD1-205ENST00000506626 KRTAP26-1Q6PEX3 210 aa2.06□□□□□ -2.08
SMAD1-205ENST00000506626 PRO3102Q9H379 93 aa2.06□□□□□ -2.08
SMAD1-205ENST00000506626 C8orf17Q9NRJ1 99 aa2.06□□□□□ -2.08
SMAD1-205ENST00000506626 PKDREJQ9NTG1 2253 aa2.06□□□□□ -2.08
SMAD1-205ENST00000506626 CUL9Q8IWT3 2517 aa2.06□□□□□ -2.08
SMAD1-205ENST00000506626 A6NDX4 124 aa2.05□□□□□ -2.08
SMAD1-205ENST00000506626 A8MUU9 505 aa2.05□□□□□ -2.08
SMAD1-205ENST00000506626 IGLV7-43P04211 117 aa2.05□□□□□ -2.08
SMAD1-205ENST00000506626 DEFB116Q30KQ4 102 aa2.05□□□□□ -2.08
SMAD1-205ENST00000506626 DEFB113Q30KQ7 82 aa2.05□□□□□ -2.08
SMAD1-205ENST00000506626 DEFB109BQ30KR1 87 aa2.05□□□□□ -2.08
SMAD1-205ENST00000506626 PCOTHQ58A44 107 aa2.05□□□□□ -2.08
SMAD1-205ENST00000506626 Q5W150 140 aa2.05□□□□□ -2.08
SMAD1-205ENST00000506626 UNQ6190/PRO20217Q6UXQ8 127 aa2.05□□□□□ -2.08
SMAD1-205ENST00000506626 Q6ZRX8 168 aa2.05□□□□□ -2.08
SMAD1-205ENST00000506626 C6orf48Q9UBA6 75 aa2.05□□□□□ -2.08
SMAD1-205ENST00000506626 MMP24-AS1A0A0U1RRL7 71 aa2.04□□□□□ -2.08
SMAD1-205ENST00000506626 SPRR1AP35321 89 aa2.04□□□□□ -2.08
SMAD1-205ENST00000506626 DEFB105AQ8NG35 78 aa2.04□□□□□ -2.08
SMAD1-205ENST00000506626 PCNX1Q96RV3 2341 aa2.04□□□□□ -2.08
SMAD1-205ENST00000506626 WNK1Q9H4A3 2382 aa2.04□□□□□ -2.08
SMAD1-205ENST00000506626 SZT2Q5T011 3432 aa2.04□□□□□ -2.08
SMAD1-205ENST00000506626 CNOT1A5YKK6 2376 aaKnown RBP2.03□□□□□ -2.08
SMAD1-205ENST00000506626 COL6A6A6NMZ7 2263 aa2.03□□□□□ -2.08
SMAD1-205ENST00000506626 UNC80Q8N2C7 3258 aa2.03□□□□□ -2.08
SMAD1-205ENST00000506626 KRTAP4-16G5E9R7 235 aaPredicted RBP2.03□□□□□ -2.08
SMAD1-205ENST00000506626 H3BUX3 64 aa2.03□□□□□ -2.08
SMAD1-205ENST00000506626 GIG44P09565 113 aaPredicted RBP2.03□□□□□ -2.08
SMAD1-205ENST00000506626 TLX1NBP0CAT3 122 aa2.03□□□□□ -2.08
SMAD1-205ENST00000506626 LYNX1P0DP58 116 aa2.03□□□□□ -2.08
SMAD1-205ENST00000506626 CLPSL2Q6UWE3 100 aa2.03□□□□□ -2.08
SMAD1-205ENST00000506626 LINC00472Q9H8W2 130 aa2.03□□□□□ -2.08
SMAD1-205ENST00000506626 MGAQ8IWI9 3026 aa2.02□□□□□ -2.09
SMAD1-205ENST00000506626 RANBP2P49792 3224 aaKnown RBP2.02□□□□□ -2.09
SMAD1-205ENST00000506626 IGFL1Q6UW32 110 aa2.02□□□□□ -2.09
SMAD1-205ENST00000506626 CAMK2N1Q7Z7J9 78 aa2.02□□□□□ -2.09
SMAD1-205ENST00000506626 NOP10Q9NPE3 64 aaKnown RBP2.02□□□□□ -2.09
SMAD1-205ENST00000506626 ZZEF1O43149 2961 aa2.02□□□□□ -2.09
SMAD1-205ENST00000506626 CFAP54Q96N23 3096 aa2.02□□□□□ -2.09
SMAD1-205ENST00000506626 TPRP12270 2363 aaKnown RBP2.01□□□□□ -2.09
SMAD1-205ENST00000506626 EP400Q96L91 3159 aa2.01□□□□□ -2.09
SMAD1-205ENST00000506626 SPINT4Q6UDR6 99 aa2.01□□□□□ -2.09
SMAD1-205ENST00000506626 CCL19Q99731 98 aa2.01□□□□□ -2.09
SMAD1-205ENST00000506626 GPR179Q6PRD1 2367 aa2.01□□□□□ -2.09
SMAD1-205ENST00000506626 ACACAQ13085 2346 aa2□□□□□ -2.09
SMAD1-205ENST00000506626 LY6G6CO95867 125 aa2□□□□□ -2.09
SMAD1-205ENST00000506626 RPL37AP61513 92 aaKnown RBP2□□□□□ -2.09
SMAD1-205ENST00000506626 TMEM105Q8N8V8 129 aa2□□□□□ -2.09
SMAD1-205ENST00000506626 LINC00304Q8N9R0 145 aa2□□□□□ -2.09
SMAD1-205ENST00000506626 PRO0255Q9UI72 69 aa2□□□□□ -2.09
SMAD1-205ENST00000506626 RP1L1Q8IWN7 2480 aaPredicted RBP2□□□□□ -2.09
SMAD1-205ENST00000506626 MAP1BP46821 2468 aaKnown RBP1.99□□□□□ -2.09
SMAD1-205ENST00000506626 ROS1P08922 2347 aa1.99□□□□□ -2.09
SMAD1-205ENST00000506626 AKAP6Q13023 2319 aa1.99□□□□□ -2.09
SMAD1-205ENST00000506626 A0A087WTM6 91 aa1.99□□□□□ -2.09
SMAD1-205ENST00000506626 BRD3OSQ6XYD6 125 aa1.99□□□□□ -2.09
SMAD1-205ENST00000506626 MRPL34Q9BQ48 92 aaKnown RBP1.99□□□□□ -2.09
SMAD1-205ENST00000506626 TNRC18O15417 2968 aaPredicted RBP1.99□□□□□ -2.09
SMAD1-205ENST00000506626 NBEAQ8NFP9 2946 aa1.99□□□□□ -2.09
SMAD1-205ENST00000506626 SPRR1BP22528 89 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms