RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 HIST1H2BDP58876 126 aa5.03□□□□□ -1.6
COPS4-204ENST00000506443 HIST1H2BCP62807 126 aa5.03□□□□□ -1.6
COPS4-204ENST00000506443 HIST2H2BEQ16778 126 aa5.03□□□□□ -1.6
COPS4-204ENST00000506443 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.03□□□□□ -1.6
COPS4-204ENST00000506443 ORMDL3Q8N138 153 aa5.03□□□□□ -1.6
COPS4-204ENST00000506443 HIST1H2BHQ93079 126 aa5.03□□□□□ -1.6
COPS4-204ENST00000506443 PRELID3AQ96N28 172 aa5.03□□□□□ -1.6
COPS4-204ENST00000506443 HIST1H2BNQ99877 126 aa5.03□□□□□ -1.6
COPS4-204ENST00000506443 HIST1H2BMQ99879 126 aa5.03□□□□□ -1.6
COPS4-204ENST00000506443 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
COPS4-204ENST00000506443 PRLHP81277 87 aa5.02□□□□□ -1.61
COPS4-204ENST00000506443 BATFQ16520 125 aa5.02□□□□□ -1.61
COPS4-204ENST00000506443 FP248Q71RG6 208 aaPredicted RBP5.02□□□□□ -1.61
COPS4-204ENST00000506443 YPEL4Q96NS1 127 aa5.02□□□□□ -1.61
COPS4-204ENST00000506443 RPS10P5Q9NQ39 176 aa5.02□□□□□ -1.61
COPS4-204ENST00000506443 IGKV2-28A0A075B6P5 120 aa5.01□□□□□ -1.61
COPS4-204ENST00000506443 LOC389332A0A1B0GUA5 103 aa5.01□□□□□ -1.61
COPS4-204ENST00000506443 A6NDN8 102 aa5.01□□□□□ -1.61
COPS4-204ENST00000506443 IGKV2D-28P01615 120 aa5.01□□□□□ -1.61
COPS4-204ENST00000506443 HERVK_113P63121 156 aa5.01□□□□□ -1.61
COPS4-204ENST00000506443 ADIRFQ15847 76 aa5.01□□□□□ -1.61
COPS4-204ENST00000506443 C1orf195Q5TG92 126 aa5.01□□□□□ -1.61
COPS4-204ENST00000506443 SPAG11AQ6PDA7 123 aa5.01□□□□□ -1.61
COPS4-204ENST00000506443 FAM19A1Q7Z5A9 133 aa5.01□□□□□ -1.61
COPS4-204ENST00000506443 LINC00337Q8N6G1 96 aa5.01□□□□□ -1.61
COPS4-204ENST00000506443 VAMP8Q9BV40 100 aa5.01□□□□□ -1.61
COPS4-204ENST00000506443 USH2AO75445 5202 aa5.01□□□□□ -1.61
COPS4-204ENST00000506443 SMIM1B2RUZ4 78 aa5□□□□□ -1.61
COPS4-204ENST00000506443 CXCL5P42830 114 aa5□□□□□ -1.61
COPS4-204ENST00000506443 C4orf26Q17RF5 130 aa5□□□□□ -1.61
COPS4-204ENST00000506443 Q8N8P6 123 aa5□□□□□ -1.61
COPS4-204ENST00000506443 C9JAW5 83 aa4.99□□□□□ -1.61
COPS4-204ENST00000506443 SEC61BP60468 96 aaKnown RBP4.99□□□□□ -1.61
COPS4-204ENST00000506443 SEC11AP67812 179 aa4.99□□□□□ -1.61
COPS4-204ENST00000506443 Q6Q795 121 aa4.99□□□□□ -1.61
COPS4-204ENST00000506443 NKAPP1Q8N9T2 125 aa4.99□□□□□ -1.61
COPS4-204ENST00000506443 COX7B2Q8TF08 81 aa4.99□□□□□ -1.61
COPS4-204ENST00000506443 IGLV5-45A0A087WSX0 123 aa4.98□□□□□ -1.61
COPS4-204ENST00000506443 M0R378 163 aa4.98□□□□□ -1.61
COPS4-204ENST00000506443 ORMDL2Q53FV1 153 aa4.98□□□□□ -1.61
COPS4-204ENST00000506443 K7EMI3 77 aa4.97□□□□□ -1.61
COPS4-204ENST00000506443 ATP5L2Q7Z4Y8 100 aa4.97□□□□□ -1.61
COPS4-204ENST00000506443 Q8NDZ9 215 aa4.97□□□□□ -1.61
COPS4-204ENST00000506443 SPRR4Q96PI1 79 aa4.97□□□□□ -1.61
COPS4-204ENST00000506443 SPINK8P0C7L1 97 aa4.96□□□□□ -1.62
COPS4-204ENST00000506443 PAPPA-AS1Q5QFB9 102 aa4.96□□□□□ -1.62
COPS4-204ENST00000506443 DAND5Q8N907 189 aa4.96□□□□□ -1.62
COPS4-204ENST00000506443 TIMM17AQ99595 171 aa4.96□□□□□ -1.62
COPS4-204ENST00000506443 GNB1LQ9BYB4 327 aa4.96□□□□□ -1.62
COPS4-204ENST00000506443 FLGP20930 4061 aaPredicted RBP4.96□□□□□ -1.62
COPS4-204ENST00000506443 K7EP34 96 aa4.95□□□□□ -1.62
COPS4-204ENST00000506443 ATP5LO75964 103 aa4.95□□□□□ -1.62
COPS4-204ENST00000506443 NDUFC2O95298 119 aa4.95□□□□□ -1.62
COPS4-204ENST00000506443 Q8NBF4 154 aa4.95□□□□□ -1.62
COPS4-204ENST00000506443 TOMM6Q96B49 74 aa4.95□□□□□ -1.62
COPS4-204ENST00000506443 TAX1BP3O14907 124 aa4.94□□□□□ -1.62
COPS4-204ENST00000506443 SPINK1P00995 79 aa4.94□□□□□ -1.62
COPS4-204ENST00000506443 HIGD2AQ9BW72 106 aa4.94□□□□□ -1.62
COPS4-204ENST00000506443 SND1-IT1Q9HBX3 110 aa4.94□□□□□ -1.62
COPS4-204ENST00000506443 IGLC3P0DOY3 106 aa4.93□□□□□ -1.62
COPS4-204ENST00000506443 PFN2P35080 140 aa4.93□□□□□ -1.62
COPS4-204ENST00000506443 NXT2Q9NPJ8 142 aaKnown RBP4.93□□□□□ -1.62
COPS4-204ENST00000506443 LAMTOR3Q9UHA4 124 aa4.93□□□□□ -1.62
COPS4-204ENST00000506443 IGLV5-39A0A0G2JS06 123 aa4.92□□□□□ -1.62
COPS4-204ENST00000506443 F8W1H4 67 aa4.92□□□□□ -1.62
COPS4-204ENST00000506443 IFITM1P13164 125 aa4.92□□□□□ -1.62
COPS4-204ENST00000506443 NDUFV3P56181 108 aaKnown RBP4.92□□□□□ -1.62
COPS4-204ENST00000506443 MEIG1Q5JSS6 88 aa4.92□□□□□ -1.62
COPS4-204ENST00000506443 Q8N377 158 aa4.92□□□□□ -1.62
COPS4-204ENST00000506443 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
COPS4-204ENST00000506443 SCGB3A1Q96QR1 104 aa4.91□□□□□ -1.62
COPS4-204ENST00000506443 DPM2O94777 84 aa4.9□□□□□ -1.63
COPS4-204ENST00000506443 TRGC2P03986 189 aa4.9□□□□□ -1.63
COPS4-204ENST00000506443 CFC1BP0CG36 223 aa4.9□□□□□ -1.63
COPS4-204ENST00000506443 COX17Q14061 63 aa4.9□□□□□ -1.63
COPS4-204ENST00000506443 PMCHL1Q16048 86 aa4.9□□□□□ -1.63
COPS4-204ENST00000506443 LINC01546A6NGU7 62 aa4.89□□□□□ -1.63
COPS4-204ENST00000506443 C9orf118A6NHY6 69 aa4.89□□□□□ -1.63
COPS4-204ENST00000506443 KRTAP4-16G5E9R7 235 aaPredicted RBP4.89□□□□□ -1.63
COPS4-204ENST00000506443 RPS29P62273 56 aaKnown RBP4.89□□□□□ -1.63
COPS4-204ENST00000506443 LINC00483Q53H64 154 aa4.89□□□□□ -1.63
COPS4-204ENST00000506443 H3BRM9 83 aa4.88□□□□□ -1.63
COPS4-204ENST00000506443 SPRR1AP35321 89 aa4.88□□□□□ -1.63
COPS4-204ENST00000506443 PMAIP1Q13794 54 aa4.88□□□□□ -1.63
COPS4-204ENST00000506443 PCOTHQ58A44 107 aa4.88□□□□□ -1.63
COPS4-204ENST00000506443 SMCR5Q8TEV8 140 aa4.88□□□□□ -1.63
COPS4-204ENST00000506443 PMCHL2Q9BQD1 86 aa4.88□□□□□ -1.63
COPS4-204ENST00000506443 ZNF706Q9Y5V0 76 aaPredicted RBP4.88□□□□□ -1.63
COPS4-204ENST00000506443 CCDC179H3BU77 68 aa4.87□□□□□ -1.63
COPS4-204ENST00000506443 HINT1P49773 126 aaPredicted RBP4.87□□□□□ -1.63
COPS4-204ENST00000506443 KIAA1644Q3SXP7 199 aa4.87□□□□□ -1.63
COPS4-204ENST00000506443 SPATA45Q537H7 98 aa4.87□□□□□ -1.63
COPS4-204ENST00000506443 ZNF625Q96I27 306 aaPredicted RBP4.87□□□□□ -1.63
COPS4-204ENST00000506443 PAM16Q9Y3D7 125 aa4.87□□□□□ -1.63
COPS4-204ENST00000506443 IGLV8-61A0A075B6I0 122 aa4.86□□□□□ -1.63
COPS4-204ENST00000506443 FAM236DA0A1B0GTK5 79 aa4.86□□□□□ -1.63
COPS4-204ENST00000506443 SLC25A20O43772 301 aa4.86□□□□□ -1.63
COPS4-204ENST00000506443 FAM236CP0DP71 79 aa4.86□□□□□ -1.63
COPS4-204ENST00000506443 SSBP3-AS1Q7Z2R9 100 aa4.86□□□□□ -1.63
COPS4-204ENST00000506443 RAB37Q96AX2 223 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms