RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 LCE2BO14633 110 aa10.5□□□□□ -0.73
SMN1-204ENST00000506163 CRYGAP11844 174 aa10.5□□□□□ -0.73
SMN1-204ENST00000506163 AKR1D1P51857 326 aa10.5□□□□□ -0.73
SMN1-204ENST00000506163 SMCR5Q8TEV8 140 aa10.5□□□□□ -0.73
SMN1-204ENST00000506163 B5MCH6 92 aa10.49□□□□□ -0.73
SMN1-204ENST00000506163 S100A7L2Q5SY68 101 aa10.49□□□□□ -0.73
SMN1-204ENST00000506163 SPANXDQ9BXN6 97 aa10.49□□□□□ -0.73
SMN1-204ENST00000506163 SPANXCQ9NY87 97 aa10.49□□□□□ -0.73
SMN1-204ENST00000506163 ETDCA0A1B0GVM5 59 aa10.48□□□□□ -0.73
SMN1-204ENST00000506163 FAM229BQ4G0N7 80 aa10.48□□□□□ -0.73
SMN1-204ENST00000506163 SCGB1D4Q6XE38 83 aa10.48□□□□□ -0.73
SMN1-204ENST00000506163 SPRR4Q96PI1 79 aa10.47□□□□□ -0.73
SMN1-204ENST00000506163 ERC2-IT1O76042 136 aa10.46□□□□□ -0.74
SMN1-204ENST00000506163 Q9BRP9 147 aa10.46□□□□□ -0.74
SMN1-204ENST00000506163 TRAV23DV6A0A075B6W5 121 aa10.45□□□□□ -0.74
SMN1-204ENST00000506163 TYMSOSQ8TAI1 123 aa10.45□□□□□ -0.74
SMN1-204ENST00000506163 LRP2P98164 4655 aa10.45□□□□□ -0.74
SMN1-204ENST00000506163 UBR4Q5T4S7 5183 aa10.43□□□□□ -0.74
SMN1-204ENST00000506163 ZNF73O43830 326 aaPredicted RBP10.43□□□□□ -0.74
SMN1-204ENST00000506163 SCGB1D1O95968 90 aa10.43□□□□□ -0.74
SMN1-204ENST00000506163 Q6ZRX8 168 aa10.43□□□□□ -0.74
SMN1-204ENST00000506163 MUSTN1Q8IVN3 82 aa10.43□□□□□ -0.74
SMN1-204ENST00000506163 S100A12P80511 92 aa10.42□□□□□ -0.74
SMN1-204ENST00000506163 C3orf22Q8N5N4 141 aa10.42□□□□□ -0.74
SMN1-204ENST00000506163 OR13C6PQ8NH95 151 aa10.41□□□□□ -0.74
SMN1-204ENST00000506163 IFITM1P13164 125 aa10.41□□□□□ -0.74
SMN1-204ENST00000506163 HSBP1L1C9JCN9 74 aa10.4□□□□□ -0.75
SMN1-204ENST00000506163 TSPAN13O95857 204 aa10.4□□□□□ -0.75
SMN1-204ENST00000506163 PPDPFQ9H3Y8 114 aa10.4□□□□□ -0.75
SMN1-204ENST00000506163 Q6ZVH6 145 aa10.39□□□□□ -0.75
SMN1-204ENST00000506163 LINC00518Q8N0U6 118 aa10.39□□□□□ -0.75
SMN1-204ENST00000506163 ZNF706Q9Y5V0 76 aaPredicted RBP10.37□□□□□ -0.75
SMN1-204ENST00000506163 LPAP08519 4548 aa10.36□□□□□ -0.75
SMN1-204ENST00000506163 LINC00483Q53H64 154 aa10.36□□□□□ -0.75
SMN1-204ENST00000506163 GAGE2AQ6NT46 116 aa10.36□□□□□ -0.75
SMN1-204ENST00000506163 LINC00304Q8N9R0 145 aa10.33□□□□□ -0.76
SMN1-204ENST00000506163 ST20-AS1Q8NBB2 130 aa10.33□□□□□ -0.76
SMN1-204ENST00000506163 COPS9Q8WXC6 57 aa10.33□□□□□ -0.76
SMN1-204ENST00000506163 COX8AP10176 69 aa10.33□□□□□ -0.76
SMN1-204ENST00000506163 JOSD1Q15040 202 aaPredicted RBP10.33□□□□□ -0.76
SMN1-204ENST00000506163 C6orf99Q4VX62 202 aa10.33□□□□□ -0.76
SMN1-204ENST00000506163 CBY1Q9Y3M2 126 aa10.33□□□□□ -0.76
SMN1-204ENST00000506163 A6NDN8 102 aa10.3□□□□□ -0.76
SMN1-204ENST00000506163 HINT1P49773 126 aaPredicted RBP10.3□□□□□ -0.76
SMN1-204ENST00000506163 COX7BP24311 80 aa10.29□□□□□ -0.76
SMN1-204ENST00000506163 ELOF1P60002 83 aaKnown RBP10.29□□□□□ -0.76
SMN1-204ENST00000506163 C14orf144Q96I85 54 aa10.29□□□□□ -0.76
SMN1-204ENST00000506163 PAM16Q9Y3D7 125 aa10.29□□□□□ -0.76
SMN1-204ENST00000506163 A4D1N5 150 aa10.28□□□□□ -0.76
SMN1-204ENST00000506163 DLEU1O43261 78 aa10.28□□□□□ -0.76
SMN1-204ENST00000506163 PRR4Q16378 134 aa10.27□□□□□ -0.77
SMN1-204ENST00000506163 SPATA45Q537H7 98 aa10.27□□□□□ -0.77
SMN1-204ENST00000506163 Q8NBF4 154 aa10.27□□□□□ -0.77
SMN1-204ENST00000506163 TRAV13-2A0A0B4J235 113 aa10.26□□□□□ -0.77
SMN1-204ENST00000506163 IGLV9-49A0A0B4J1Y8 123 aa10.25□□□□□ -0.77
SMN1-204ENST00000506163 TRBV7-6A0A0J9YX20 115 aa10.25□□□□□ -0.77
SMN1-204ENST00000506163 SMIM11BQ8TCY0 68 aa10.25□□□□□ -0.77
SMN1-204ENST00000506163 DHRS4-AS1Q9P1J3 65 aa10.25□□□□□ -0.77
SMN1-204ENST00000506163 MOBPQ13875 183 aa10.24□□□□□ -0.77
SMN1-204ENST00000506163 RETNLBQ9BQ08 111 aa10.24□□□□□ -0.77
SMN1-204ENST00000506163 PYY3Q5JQD4 70 aa10.24□□□□□ -0.77
SMN1-204ENST00000506163 HIST1H4GQ99525 98 aa10.24□□□□□ -0.77
SMN1-204ENST00000506163 VAMP8Q9BV40 100 aa10.24□□□□□ -0.77
SMN1-204ENST00000506163 SPRR1BP22528 89 aa10.22□□□□□ -0.77
SMN1-204ENST00000506163 C2orf91Q6ZV80 131 aa10.22□□□□□ -0.77
SMN1-204ENST00000506163 A0A1B0GWB2 263 aa10.21□□□□□ -0.78
SMN1-204ENST00000506163 C12orf57Q99622 126 aa10.21□□□□□ -0.78
SMN1-204ENST00000506163 SPAG11AQ6PDA7 123 aa10.2□□□□□ -0.78
SMN1-204ENST00000506163 SSBP3-AS1Q7Z2R9 100 aa10.2□□□□□ -0.78
SMN1-204ENST00000506163 RNF213Q63HN8 5207 aa10.2□□□□□ -0.78
SMN1-204ENST00000506163 SLC25A34Q6PIV7 304 aa10.19□□□□□ -0.78
SMN1-204ENST00000506163 HIGD1BQ9P298 99 aa10.19□□□□□ -0.78
SMN1-204ENST00000506163 LINC01547P58512 204 aaPredicted RBP10.18□□□□□ -0.78
SMN1-204ENST00000506163 DEFB105AQ8NG35 78 aa10.16□□□□□ -0.78
SMN1-204ENST00000506163 C4orf48Q5BLP8 95 aa10.16□□□□□ -0.78
SMN1-204ENST00000506163 CFC1BP0CG36 223 aa10.15□□□□□ -0.79
SMN1-204ENST00000506163 CFC1P0CG37 223 aa10.15□□□□□ -0.79
SMN1-204ENST00000506163 C9orf153Q5TBE3 101 aa10.15□□□□□ -0.79
SMN1-204ENST00000506163 SPINK1P00995 79 aa10.14□□□□□ -0.79
SMN1-204ENST00000506163 TAL2Q16559 108 aa10.14□□□□□ -0.79
SMN1-204ENST00000506163 SMIM29Q86T20 159 aa10.14□□□□□ -0.79
SMN1-204ENST00000506163 IGLV5-48A0A075B6I7 105 aa10.13□□□□□ -0.79
SMN1-204ENST00000506163 TEX49A0A1B0GTD5 131 aa10.12□□□□□ -0.79
SMN1-204ENST00000506163 Q1RN00 199 aa10.12□□□□□ -0.79
SMN1-204ENST00000506163 LINC00575Q6W349 94 aa10.12□□□□□ -0.79
SMN1-204ENST00000506163 Q8N377 158 aa10.1□□□□□ -0.79
SMN1-204ENST00000506163 LAMTOR3Q9UHA4 124 aa10.1□□□□□ -0.79
SMN1-204ENST00000506163 IGLV7-46A0A075B6I9 117 aa10.09□□□□□ -0.79
SMN1-204ENST00000506163 CEND1Q8N111 149 aa10.09□□□□□ -0.79
SMN1-204ENST00000506163 VAMP3Q15836 100 aa10.08□□□□□ -0.8
SMN1-204ENST00000506163 H7C2G1 150 aa10.07□□□□□ -0.8
SMN1-204ENST00000506163 FXYD2P54710 66 aa10.07□□□□□ -0.8
SMN1-204ENST00000506163 C21orf62-AS1Q17RA5 79 aa10.07□□□□□ -0.8
SMN1-204ENST00000506163 RPS29P62273 56 aaKnown RBP10.07□□□□□ -0.8
SMN1-204ENST00000506163 NHP2Q9NX24 153 aaKnown RBP10.07□□□□□ -0.8
SMN1-204ENST00000506163 A0A0B4J2C4 111 aa10.06□□□□□ -0.8
SMN1-204ENST00000506163 A0A0G2JQZ4 141 aa10.05□□□□□ -0.8
SMN1-204ENST00000506163 hADV29S1A0JD25 119 aa10.05□□□□□ -0.8
SMN1-204ENST00000506163 HRCT1Q6UXD1 115 aa10.05□□□□□ -0.8
SMN1-204ENST00000506163 RAB37Q96AX2 223 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms