RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 KRTAP10-8P60410 259 aa4.21□□□□□ -1.74
NR1I3-221ENST00000505944 UBE2BP63146 152 aa4.21□□□□□ -1.74
NR1I3-221ENST00000505944 C12orf57Q99622 126 aa4.21□□□□□ -1.74
NR1I3-221ENST00000505944 TMEM238C9JI98 176 aa4.2□□□□□ -1.74
NR1I3-221ENST00000505944 COX8AP10176 69 aa4.2□□□□□ -1.74
NR1I3-221ENST00000505944 COX17Q14061 63 aa4.2□□□□□ -1.74
NR1I3-221ENST00000505944 SFTA2Q6UW10 78 aa4.2□□□□□ -1.74
NR1I3-221ENST00000505944 NKAPP1Q8N9T2 125 aa4.2□□□□□ -1.74
NR1I3-221ENST00000505944 LINC00308Q8TCZ7 52 aa4.2□□□□□ -1.74
NR1I3-221ENST00000505944 LINC00167Q96N53 147 aa4.2□□□□□ -1.74
NR1I3-221ENST00000505944 KRTAP3-1Q9BYR8 98 aa4.2□□□□□ -1.74
NR1I3-221ENST00000505944 C2orf91Q6ZV80 131 aa4.19□□□□□ -1.74
NR1I3-221ENST00000505944 MRPL55Q7Z7F7 128 aaKnown RBP4.19□□□□□ -1.74
NR1I3-221ENST00000505944 MUSTN1Q8IVN3 82 aa4.19□□□□□ -1.74
NR1I3-221ENST00000505944 PSORS1C2Q9UIG4 136 aa4.19□□□□□ -1.74
NR1I3-221ENST00000505944 C1orf137Q5JT78 98 aa4.18□□□□□ -1.74
NR1I3-221ENST00000505944 SLC25A34Q6PIV7 304 aa4.18□□□□□ -1.74
NR1I3-221ENST00000505944 MIEN1Q9BRT3 115 aa4.18□□□□□ -1.74
NR1I3-221ENST00000505944 TRBV10-3A0A0K0K1G6 114 aa4.17□□□□□ -1.74
NR1I3-221ENST00000505944 TIMM17BO60830 172 aa4.17□□□□□ -1.74
NR1I3-221ENST00000505944 SRSF9Q13242 221 aaKnown RBP eCLIP4.17□□□□□ -1.74
NR1I3-221ENST00000505944 HIST1H4GQ99525 98 aa4.17□□□□□ -1.74
NR1I3-221ENST00000505944 SPANXDQ9BXN6 97 aa4.17□□□□□ -1.74
NR1I3-221ENST00000505944 SPANXCQ9NY87 97 aa4.17□□□□□ -1.74
NR1I3-221ENST00000505944 IGLV5-37A0A075B6J1 123 aa4.16□□□□□ -1.74
NR1I3-221ENST00000505944 LINC00587B1AMM8 73 aa4.16□□□□□ -1.74
NR1I3-221ENST00000505944 SMIM6P0DI80 62 aa4.16□□□□□ -1.74
NR1I3-221ENST00000505944 PCP4P48539 62 aa4.16□□□□□ -1.74
NR1I3-221ENST00000505944 S100A12P80511 92 aa4.16□□□□□ -1.74
NR1I3-221ENST00000505944 RPL24P83731 157 aaKnown RBP4.16□□□□□ -1.74
NR1I3-221ENST00000505944 LINC00337Q8N6G1 96 aa4.16□□□□□ -1.74
NR1I3-221ENST00000505944 OR13C6PQ8NH95 151 aa4.16□□□□□ -1.74
NR1I3-221ENST00000505944 MUC2Q02817 5179 aa4.15□□□□□ -1.74
NR1I3-221ENST00000505944 IGLV1-50A0A075B6I6 118 aa4.15□□□□□ -1.75
NR1I3-221ENST00000505944 M0R378 163 aa4.15□□□□□ -1.75
NR1I3-221ENST00000505944 DDTP30046 118 aa4.15□□□□□ -1.75
NR1I3-221ENST00000505944 PRLHP81277 87 aa4.15□□□□□ -1.75
NR1I3-221ENST00000505944 LBHQ53QV2 105 aaPredicted RBP4.15□□□□□ -1.75
NR1I3-221ENST00000505944 SPANXB1Q9NS25 103 aaPredicted RBP4.15□□□□□ -1.75
NR1I3-221ENST00000505944 FAT4Q6V0I7 4981 aa4.14□□□□□ -1.75
NR1I3-221ENST00000505944 LOC107984156A0A0G2JMH3 177 aa4.14□□□□□ -1.75
NR1I3-221ENST00000505944 DLEU1O43261 78 aa4.14□□□□□ -1.75
NR1I3-221ENST00000505944 FXYD2P54710 66 aa4.14□□□□□ -1.75
NR1I3-221ENST00000505944 S100A7L2Q5SY68 101 aa4.14□□□□□ -1.75
NR1I3-221ENST00000505944 ARL17AQ8IVW1 177 aa4.14□□□□□ -1.75
NR1I3-221ENST00000505944 TMEM126AQ9H061 195 aa4.14□□□□□ -1.75
NR1I3-221ENST00000505944 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
NR1I3-221ENST00000505944 A6NDN8 102 aa4.13□□□□□ -1.75
NR1I3-221ENST00000505944 B5MCH6 92 aa4.13□□□□□ -1.75
NR1I3-221ENST00000505944 H7C2G1 150 aa4.13□□□□□ -1.75
NR1I3-221ENST00000505944 K7ERJ3 54 aa4.13□□□□□ -1.75
NR1I3-221ENST00000505944 IGLV7-43P04211 117 aa4.13□□□□□ -1.75
NR1I3-221ENST00000505944 FAM19A1Q7Z5A9 133 aa4.13□□□□□ -1.75
NR1I3-221ENST00000505944 UQCR10Q9UDW1 63 aa4.13□□□□□ -1.75
NR1I3-221ENST00000505944 BCE1O60756 84 aa4.12□□□□□ -1.75
NR1I3-221ENST00000505944 NDUFC2O95298 119 aa4.12□□□□□ -1.75
NR1I3-221ENST00000505944 IGLV6-57P01721 117 aa4.12□□□□□ -1.75
NR1I3-221ENST00000505944 IFITM1P13164 125 aa4.12□□□□□ -1.75
NR1I3-221ENST00000505944 RPL13AP40429 203 aaKnown RBP4.12□□□□□ -1.75
NR1I3-221ENST00000505944 UBE2AP49459 152 aa4.12□□□□□ -1.75
NR1I3-221ENST00000505944 LINC00518Q8N0U6 118 aa4.12□□□□□ -1.75
NR1I3-221ENST00000505944 ANAPC11Q9NYG5 84 aa4.12□□□□□ -1.75
NR1I3-221ENST00000505944 HIGD1BQ9P298 99 aa4.12□□□□□ -1.75
NR1I3-221ENST00000505944 TRAV23DV6A0A075B6W5 121 aa4.11□□□□□ -1.75
NR1I3-221ENST00000505944 TRBV10-2A0A0K0K1G8 114 aa4.11□□□□□ -1.75
NR1I3-221ENST00000505944 ETDCA0A1B0GVM5 59 aa4.11□□□□□ -1.75
NR1I3-221ENST00000505944 HINT1P49773 126 aaPredicted RBP4.11□□□□□ -1.75
NR1I3-221ENST00000505944 CEND1Q8N111 149 aa4.11□□□□□ -1.75
NR1I3-221ENST00000505944 DIRC1Q969H9 104 aa4.11□□□□□ -1.75
NR1I3-221ENST00000505944 PRYO14603 147 aa4.1□□□□□ -1.75
NR1I3-221ENST00000505944 CFC1BP0CG36 223 aa4.1□□□□□ -1.75
NR1I3-221ENST00000505944 CFC1P0CG37 223 aa4.1□□□□□ -1.75
NR1I3-221ENST00000505944 HSD52Q0P140 79 aa4.1□□□□□ -1.75
NR1I3-221ENST00000505944 Q6ZVH6 145 aa4.1□□□□□ -1.75
NR1I3-221ENST00000505944 HIGD2AQ9BW72 106 aa4.1□□□□□ -1.75
NR1I3-221ENST00000505944 KCNQ1DNQ9H478 68 aa4.1□□□□□ -1.75
NR1I3-221ENST00000505944 NHP2Q9NX24 153 aaKnown RBP4.1□□□□□ -1.75
NR1I3-221ENST00000505944 ZNF73O43830 326 aaPredicted RBP4.09□□□□□ -1.75
NR1I3-221ENST00000505944 ERC2-IT1O76042 136 aa4.09□□□□□ -1.75
NR1I3-221ENST00000505944 BATFQ16520 125 aa4.09□□□□□ -1.75
NR1I3-221ENST00000505944 C6orf99Q4VX62 202 aa4.09□□□□□ -1.75
NR1I3-221ENST00000505944 BVES-AS1Q5T3Y7 98 aa4.09□□□□□ -1.75
NR1I3-221ENST00000505944 KRTAP13-1Q8IUC0 172 aa4.09□□□□□ -1.75
NR1I3-221ENST00000505944 SMIM11BQ8TCY0 68 aa4.09□□□□□ -1.75
NR1I3-221ENST00000505944 KRTAP4-16G5E9R7 235 aaPredicted RBP4.08□□□□□ -1.76
NR1I3-221ENST00000505944 ZNF861PO60384 105 aa4.08□□□□□ -1.76
NR1I3-221ENST00000505944 SMCR5Q8TEV8 140 aa4.08□□□□□ -1.76
NR1I3-221ENST00000505944 RAB37Q96AX2 223 aa4.08□□□□□ -1.76
NR1I3-221ENST00000505944 NAA38Q9BRA0 125 aaKnown RBP4.08□□□□□ -1.76
NR1I3-221ENST00000505944 Q9BRP9 147 aa4.08□□□□□ -1.76
NR1I3-221ENST00000505944 PPDPFQ9H3Y8 114 aa4.08□□□□□ -1.76
NR1I3-221ENST00000505944 TRAV13-2A0A0B4J235 113 aa4.07□□□□□ -1.76
NR1I3-221ENST00000505944 PCP4L1A6NKN8 68 aa4.07□□□□□ -1.76
NR1I3-221ENST00000505944 TSTD3H0UI37 97 aa4.07□□□□□ -1.76
NR1I3-221ENST00000505944 H0Y9J4 135 aa4.07□□□□□ -1.76
NR1I3-221ENST00000505944 SPRR1AP35321 89 aa4.07□□□□□ -1.76
NR1I3-221ENST00000505944 RPL28P46779 137 aaKnown RBP4.07□□□□□ -1.76
NR1I3-221ENST00000505944 PRR4Q16378 134 aa4.07□□□□□ -1.76
NR1I3-221ENST00000505944 Q1RN00 199 aa4.07□□□□□ -1.76
NR1I3-221ENST00000505944 ST20-AS1Q8NBB2 130 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms