RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 NSD3Q9BZ95 1437 aa0.28□□□□□ -2.37
TOPBP1-204ENST00000505804 MAGI1Q96QZ7 1491 aaPredicted RBP0.28□□□□□ -2.37
TOPBP1-204ENST00000505804 MLH3Q9UHC1 1453 aa0.28□□□□□ -2.37
TOPBP1-204ENST00000505804 PLCE1Q9P212 2302 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 LPAP08519 4548 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 RGPD3A6NKT7 1758 aaPredicted RBP0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 M0R143 59 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 M0R3E3 92 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 GNGT2O14610 69 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 MPC2O95563 127 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 MT-ATP8P03928 68 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 TRAPPC2P0DI81 140 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 TRAPPC2BP0DI82 140 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 SEC11AP67812 179 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 KRTAP19-6Q3LI70 58 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 SFTA2Q6UW10 78 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 SPINK6Q6UWN8 80 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 SPRR4Q96PI1 79 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 CNFNQ9BYD5 112 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 AP4S1Q9Y587 144 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 ANKRD36BQ8N2N9 1353 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 RAPGEF2Q9Y4G8 1499 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 TARBP1Q13395 1621 aaKnown RBP0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 C5P01031 1676 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 PREX1Q8TCU6 1659 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 A0A0G2JMZ2 1700 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 KNDC1Q76NI1 1749 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 UBR1Q8IWV7 1749 aa0.27□□□□□ -2.37
TOPBP1-204ENST00000505804 DNAH17Q9UFH2 4485 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 ANKRD36A6QL64 1941 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 A0A0D9SFI3 127 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 LCE6AA0A183 80 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 FAM223BA6NKX1 122 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 C10orf142B7Z368 130 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 BCE1O60756 84 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 SAA2P0DJI9 122 aaPredicted RBP0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 S100A3P33764 101 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 PMCHL2Q9BQD1 86 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 PRO0255Q9UI72 69 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 SPCS1Q9Y6A9 102 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 TROQ12816 1431 aaPredicted RBP0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 C1orf167Q5SNV9 1468 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 ASXL1Q8IXJ9 1541 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 MYO3AQ8NEV4 1616 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 TSC2P49815 1807 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 MYH4Q9Y623 1939 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 VPS13DQ5THJ4 4388 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 DNAH2Q9P225 4427 aa0.26□□□□□ -2.37
TOPBP1-204ENST00000505804 ACACAQ13085 2346 aa0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 PKDREJQ9NTG1 2253 aa0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 WNK2Q9Y3S1 2297 aa0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 KIAA1551Q9HCM1 1747 aa0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 CRYBG1Q9Y4K1 1723 aa0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 PREX2Q70Z35 1606 aa0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 PLEKHH2Q8IVE3 1493 aa0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 A0A1B0GWA3 101 aa0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 NDUFC1O43677 76 aa0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 LINC00032P0C843 101 aa0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 PKIAP61925 76 aa0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 UBA52P62987 128 aaKnown RBP0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 TMEM263Q8WUH6 116 aaKnown RBP0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 DPY30Q9C005 99 aa0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 HRNRQ86YZ3 2850 aaPredicted RBP0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 URB1O60287 2271 aaKnown RBP0.25□□□□□ -2.37
TOPBP1-204ENST00000505804 NLRP1Q9C000 1473 aa0.24□□□□□ -2.37
TOPBP1-204ENST00000505804 TNXBP22105 4242 aa0.24□□□□□ -2.37
TOPBP1-204ENST00000505804 DNAH3Q8TD57 4116 aa0.24□□□□□ -2.37
TOPBP1-204ENST00000505804 A0A0G2JND7 137 aa0.24□□□□□ -2.37
TOPBP1-204ENST00000505804 H7BZZ5 65 aa0.24□□□□□ -2.37
TOPBP1-204ENST00000505804 I3L2K1 104 aa0.24□□□□□ -2.37
TOPBP1-204ENST00000505804 ATOX1O00244 68 aa0.24□□□□□ -2.37
TOPBP1-204ENST00000505804 COL5A1-AS1Q5SY13 56 aa0.24□□□□□ -2.37
TOPBP1-204ENST00000505804 C10orf113Q5VZT2 155 aa0.24□□□□□ -2.37
TOPBP1-204ENST00000505804 TP53AIP1Q9HCN2 124 aa0.24□□□□□ -2.37
TOPBP1-204ENST00000505804 CACFD1Q9UGQ2 172 aa0.24□□□□□ -2.37
TOPBP1-204ENST00000505804 PPLO60437 1756 aa0.24□□□□□ -2.37
TOPBP1-204ENST00000505804 PKD1L3Q7Z443 1732 aa0.24□□□□□ -2.37
TOPBP1-204ENST00000505804 ZC3H13Q5T200 1668 aaKnown RBP0.24□□□□□ -2.37
TOPBP1-204ENST00000505804 ADCY10Q96PN6 1610 aa0.24□□□□□ -2.37
TOPBP1-204ENST00000505804 GLI2P10070 1586 aa0.23□□□□□ -2.37
TOPBP1-204ENST00000505804 ABCC2Q92887 1545 aa0.23□□□□□ -2.37
TOPBP1-204ENST00000505804 FANCAO15360 1455 aa0.23□□□□□ -2.37
TOPBP1-204ENST00000505804 MAGI2Q86UL8 1455 aa0.23□□□□□ -2.37
TOPBP1-204ENST00000505804 TRBV25-1A0A075B6N4 114 aa0.23□□□□□ -2.37
TOPBP1-204ENST00000505804 TRBV6-1A0A0K0K1D8 114 aa0.23□□□□□ -2.37
TOPBP1-204ENST00000505804 MT4P47944 62 aa0.23□□□□□ -2.37
TOPBP1-204ENST00000505804 PMCHL1Q16048 86 aa0.23□□□□□ -2.37
TOPBP1-204ENST00000505804 Q5BKY6 102 aa0.23□□□□□ -2.37
TOPBP1-204ENST00000505804 SERP2Q8N6R1 65 aa0.23□□□□□ -2.37
TOPBP1-204ENST00000505804 TRGV9Q99603 122 aa0.23□□□□□ -2.37
TOPBP1-204ENST00000505804 SNHG12Q9BXW3 62 aa0.23□□□□□ -2.37
TOPBP1-204ENST00000505804 PRO1933Q9H354 126 aa0.23□□□□□ -2.37
TOPBP1-204ENST00000505804 RNF17Q9BXT8 1623 aaKnown RBP0.23□□□□□ -2.37
TOPBP1-204ENST00000505804 KDM5DQ9BY66 1539 aa0.23□□□□□ -2.37
TOPBP1-204ENST00000505804 AKAP6Q13023 2319 aa0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 KIF20BQ96Q89 1820 aa0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 COL14A1Q05707 1796 aaKnown RBP0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 A0A087WVE0 104 aa0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 TRBV7-7A0A0K0K1E9 115 aa0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 SYS1-DBNDD2H3BUS1 97 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms