RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 TLX1NBP0CAT3 122 aa12.65□□□□□ -0.38
SDHA-206ENST00000505555 STAB2Q8WWQ8 2551 aa12.64□□□□□ -0.39
SDHA-206ENST00000505555 RPL37AP8A6NKH3 93 aa12.64□□□□□ -0.39
SDHA-206ENST00000505555 DNAH10Q8IVF4 4471 aa12.64□□□□□ -0.39
SDHA-206ENST00000505555 H3BQ85 93 aa12.64□□□□□ -0.39
SDHA-206ENST00000505555 RMI2Q96E14 147 aa12.64□□□□□ -0.39
SDHA-206ENST00000505555 UPK3BQ9BT76 320 aa12.64□□□□□ -0.39
SDHA-206ENST00000505555 KCNQ1DNQ9H478 68 aa12.64□□□□□ -0.39
SDHA-206ENST00000505555 SMIM20Q8N5G0 67 aa12.62□□□□□ -0.39
SDHA-206ENST00000505555 UBL5Q9BZL1 73 aa12.62□□□□□ -0.39
SDHA-206ENST00000505555 DNAH9Q9NYC9 4486 aa12.62□□□□□ -0.39
SDHA-206ENST00000505555 SERP2Q8N6R1 65 aa12.61□□□□□ -0.39
SDHA-206ENST00000505555 KRTAP7-1Q8IUC3 87 aa12.61□□□□□ -0.39
SDHA-206ENST00000505555 KRTAP1-5Q9BYS1 174 aa12.6□□□□□ -0.39
SDHA-206ENST00000505555 FAM19A1Q7Z5A9 133 aa12.59□□□□□ -0.39
SDHA-206ENST00000505555 MDFIQ99750 246 aa12.59□□□□□ -0.39
SDHA-206ENST00000505555 TRBV7-4A0A0J9YYF1 115 aa12.58□□□□□ -0.4
SDHA-206ENST00000505555 PLA2G2DQ9UNK4 145 aa12.58□□□□□ -0.4
SDHA-206ENST00000505555 GHRHP01286 108 aa12.57□□□□□ -0.4
SDHA-206ENST00000505555 DEFB105AQ8NG35 78 aa12.57□□□□□ -0.4
SDHA-206ENST00000505555 PDE6GP18545 87 aa12.56□□□□□ -0.4
SDHA-206ENST00000505555 FAM19A5Q7Z5A7 132 aaPredicted RBP12.56□□□□□ -0.4
SDHA-206ENST00000505555 CYSTM1Q9H1C7 97 aa12.56□□□□□ -0.4
SDHA-206ENST00000505555 IGLV1-50A0A075B6I6 118 aa12.55□□□□□ -0.4
SDHA-206ENST00000505555 Q6ZVQ6 151 aa12.54□□□□□ -0.4
SDHA-206ENST00000505555 TENM2Q9NT68 2774 aa12.54□□□□□ -0.4
SDHA-206ENST00000505555 HAMPP81172 84 aa12.53□□□□□ -0.4
SDHA-206ENST00000505555 IGLV5-37A0A075B6J1 123 aa12.53□□□□□ -0.4
SDHA-206ENST00000505555 LOC107984640A0A0U1RRK4 108 aa12.52□□□□□ -0.41
SDHA-206ENST00000505555 LINC01547P58512 204 aaPredicted RBP12.52□□□□□ -0.41
SDHA-206ENST00000505555 Q9BRP9 147 aa12.52□□□□□ -0.41
SDHA-206ENST00000505555 DNAH7Q8WXX0 4024 aa12.51□□□□□ -0.41
SDHA-206ENST00000505555 CSMD3Q7Z407 3707 aa12.51□□□□□ -0.41
SDHA-206ENST00000505555 KRTAP4-16G5E9R7 235 aaPredicted RBP12.51□□□□□ -0.41
SDHA-206ENST00000505555 Q6ZRX8 168 aa12.51□□□□□ -0.41
SDHA-206ENST00000505555 UBE2DNLQ8IWF7 75 aa12.51□□□□□ -0.41
SDHA-206ENST00000505555 Q8N377 158 aa12.51□□□□□ -0.41
SDHA-206ENST00000505555 MRPL55Q7Z7F7 128 aaKnown RBP12.5□□□□□ -0.41
SDHA-206ENST00000505555 APLNQ9ULZ1 77 aa12.5□□□□□ -0.41
SDHA-206ENST00000505555 SVIPQ8NHG7 77 aa12.49□□□□□ -0.41
SDHA-206ENST00000505555 ETDCA0A1B0GVM5 59 aa12.49□□□□□ -0.41
SDHA-206ENST00000505555 PRYO14603 147 aa12.49□□□□□ -0.41
SDHA-206ENST00000505555 PSCAO43653 123 aa12.47□□□□□ -0.41
SDHA-206ENST00000505555 SPRR1AP35321 89 aa12.47□□□□□ -0.41
SDHA-206ENST00000505555 DYNC2H1Q8NCM8 4307 aaKnown RBP12.47□□□□□ -0.41
SDHA-206ENST00000505555 ST20-AS1Q8NBB2 130 aa12.46□□□□□ -0.41
SDHA-206ENST00000505555 DHRS4-AS1Q9P1J3 65 aa12.46□□□□□ -0.41
SDHA-206ENST00000505555 IGKV2-24A0A0C4DH68 120 aa12.46□□□□□ -0.42
SDHA-206ENST00000505555 A0A096LNI7 61 aa12.45□□□□□ -0.42
SDHA-206ENST00000505555 SCXQ7RTU7 201 aa12.45□□□□□ -0.42
SDHA-206ENST00000505555 CXCL6P80162 114 aa12.44□□□□□ -0.42
SDHA-206ENST00000505555 B9D2Q9BPU9 175 aa12.44□□□□□ -0.42
SDHA-206ENST00000505555 PLECQ15149 4684 aaKnown RBP12.44□□□□□ -0.42
SDHA-206ENST00000505555 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.43□□□□□ -0.42
SDHA-206ENST00000505555 ERC2-IT1O76042 136 aa12.43□□□□□ -0.42
SDHA-206ENST00000505555 BCE1O60756 84 aa12.43□□□□□ -0.42
SDHA-206ENST00000505555 TMEM258P61165 79 aa12.41□□□□□ -0.42
SDHA-206ENST00000505555 A0A1W2PNN7 141 aa12.4□□□□□ -0.42
SDHA-206ENST00000505555 UBE2BP63146 152 aa12.4□□□□□ -0.42
SDHA-206ENST00000505555 CNBPP62633 177 aaKnown RBP12.39□□□□□ -0.43
SDHA-206ENST00000505555 REG3GQ6UW15 175 aa12.39□□□□□ -0.43
SDHA-206ENST00000505555 C16orf90A8MZG2 172 aa12.38□□□□□ -0.43
SDHA-206ENST00000505555 C3orf84H3BNL1 204 aa12.38□□□□□ -0.43
SDHA-206ENST00000505555 IGLV5-48A0A075B6I7 105 aa12.38□□□□□ -0.43
SDHA-206ENST00000505555 RPS28P62857 69 aaKnown RBP12.38□□□□□ -0.43
SDHA-206ENST00000505555 J3KT08 172 aa12.37□□□□□ -0.43
SDHA-206ENST00000505555 TRAV7A0A075B6U4 112 aa12.35□□□□□ -0.43
SDHA-206ENST00000505555 CHTF8P0CG12 524 aa12.35□□□□□ -0.43
SDHA-206ENST00000505555 DPH3Q96FX2 82 aa12.34□□□□□ -0.43
SDHA-206ENST00000505555 NREPQ16612 68 aa12.33□□□□□ -0.44
SDHA-206ENST00000505555 Q8N9L7 120 aa12.32□□□□□ -0.44
SDHA-206ENST00000505555 PRLHP81277 87 aa12.31□□□□□ -0.44
SDHA-206ENST00000505555 TNP2Q05952 138 aa12.31□□□□□ -0.44
SDHA-206ENST00000505555 C20orf197Q8N268 126 aa12.31□□□□□ -0.44
SDHA-206ENST00000505555 A0A1W2PNM2 257 aa12.31□□□□□ -0.44
SDHA-206ENST00000505555 C1orf137Q5JT78 98 aa12.31□□□□□ -0.44
SDHA-206ENST00000505555 NBDYA0A0U1RRE5 68 aa12.3□□□□□ -0.44
SDHA-206ENST00000505555 C14orf177Q52M58 125 aa12.29□□□□□ -0.44
SDHA-206ENST00000505555 LRCOL1A6NCL2 159 aa12.29□□□□□ -0.44
SDHA-206ENST00000505555 KRTAP11-1Q8IUC1 163 aa12.29□□□□□ -0.44
SDHA-206ENST00000505555 PHF5AQ7RTV0 110 aaKnown RBP12.28□□□□□ -0.44
SDHA-206ENST00000505555 STARD9Q9P2P6 4700 aa12.28□□□□□ -0.44
SDHA-206ENST00000505555 PRKDCP78527 4128 aaKnown RBP12.27□□□□□ -0.44
SDHA-206ENST00000505555 NUPR2A6NF83 97 aa12.27□□□□□ -0.45
SDHA-206ENST00000505555 FUSP35637 526 aaKnown RBP eCLIP12.27□□□□□ -0.45
SDHA-206ENST00000505555 SMIM29Q86T20 159 aa12.27□□□□□ -0.45
SDHA-206ENST00000505555 SRRM2Q9UQ35 2752 aaKnown RBP12.26□□□□□ -0.45
SDHA-206ENST00000505555 A0A0G2JQZ4 141 aa12.25□□□□□ -0.45
SDHA-206ENST00000505555 KRTAP21-3Q3LHN1 58 aa12.25□□□□□ -0.45
SDHA-206ENST00000505555 HIGD2AQ9BW72 106 aa12.25□□□□□ -0.45
SDHA-206ENST00000505555 BPY2O14599 106 aa12.23□□□□□ -0.45
SDHA-206ENST00000505555 KLKP1Q107X0 134 aa12.23□□□□□ -0.45
SDHA-206ENST00000505555 C9orf163Q8N9P6 203 aa12.23□□□□□ -0.45
SDHA-206ENST00000505555 OXTP01178 125 aa12.23□□□□□ -0.45
SDHA-206ENST00000505555 Q6ZRN7 208 aaPredicted RBP12.23□□□□□ -0.45
SDHA-206ENST00000505555 Q8NBF4 154 aa12.22□□□□□ -0.45
SDHA-206ENST00000505555 IGKV4-1P06312 121 aa12.22□□□□□ -0.45
SDHA-206ENST00000505555 H7BZZ5 65 aa12.21□□□□□ -0.45
SDHA-206ENST00000505555 MEGF8Q7Z7M0 2845 aa12.21□□□□□ -0.45
SDHA-206ENST00000505555 VPS13DQ5THJ4 4388 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms