RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 Q8N9L7 120 aa10.47□□□□□ -0.73
DDX41-205ENST00000505081 CXCL6P80162 114 aa10.47□□□□□ -0.73
DDX41-205ENST00000505081 RPS28P62857 69 aaKnown RBP10.46□□□□□ -0.73
DDX41-205ENST00000505081 LINC01556Q5JQF7 62 aa10.46□□□□□ -0.74
DDX41-205ENST00000505081 SNURFQ9Y675 71 aa10.45□□□□□ -0.74
DDX41-205ENST00000505081 BAHCC1Q9P281 2608 aa10.45□□□□□ -0.74
DDX41-205ENST00000505081 TRAV7A0A075B6U4 112 aa10.45□□□□□ -0.74
DDX41-205ENST00000505081 C7orf33Q8WU49 177 aa10.45□□□□□ -0.74
DDX41-205ENST00000505081 CASC10Q5T4H9 136 aa10.44□□□□□ -0.74
DDX41-205ENST00000505081 C11orf45Q8TAV5 145 aa10.44□□□□□ -0.74
DDX41-205ENST00000505081 RPL37AP8A6NKH3 93 aa10.44□□□□□ -0.74
DDX41-205ENST00000505081 FAM168BA1KXE4 195 aa10.44□□□□□ -0.74
DDX41-205ENST00000505081 NKAPP1Q8N9T2 125 aa10.44□□□□□ -0.74
DDX41-205ENST00000505081 TM2D3Q9BRN9 247 aa10.43□□□□□ -0.74
DDX41-205ENST00000505081 C3orf84H3BNL1 204 aa10.43□□□□□ -0.74
DDX41-205ENST00000505081 RMI2Q96E14 147 aa10.42□□□□□ -0.74
DDX41-205ENST00000505081 Q8N377 158 aa10.4□□□□□ -0.74
DDX41-205ENST00000505081 KCNQ1DNQ9H478 68 aa10.4□□□□□ -0.74
DDX41-205ENST00000505081 H7BZZ5 65 aa10.4□□□□□ -0.75
DDX41-205ENST00000505081 PRB2P02812 416 aaPredicted RBP10.39□□□□□ -0.75
DDX41-205ENST00000505081 NBEAL1Q6ZS30 2694 aa10.38□□□□□ -0.75
DDX41-205ENST00000505081 BPY2O14599 106 aa10.38□□□□□ -0.75
DDX41-205ENST00000505081 DNAH3Q8TD57 4116 aa10.38□□□□□ -0.75
DDX41-205ENST00000505081 KRTAP24-1Q3LI83 254 aa10.37□□□□□ -0.75
DDX41-205ENST00000505081 DNAH1Q9P2D7 4330 aa10.37□□□□□ -0.75
DDX41-205ENST00000505081 FAM236DA0A1B0GTK5 79 aa10.37□□□□□ -0.75
DDX41-205ENST00000505081 BCE1O60756 84 aa10.37□□□□□ -0.75
DDX41-205ENST00000505081 FAM236CP0DP71 79 aa10.37□□□□□ -0.75
DDX41-205ENST00000505081 DNAH10OSP0CZ25 163 aa10.36□□□□□ -0.75
DDX41-205ENST00000505081 NREPQ16612 68 aa10.36□□□□□ -0.75
DDX41-205ENST00000505081 Q9BRP9 147 aa10.36□□□□□ -0.75
DDX41-205ENST00000505081 KRTAP7-1Q8IUC3 87 aa10.36□□□□□ -0.75
DDX41-205ENST00000505081 ST20-AS1Q8NBB2 130 aa10.36□□□□□ -0.75
DDX41-205ENST00000505081 LINC00588Q9Y4M8 146 aa10.36□□□□□ -0.75
DDX41-205ENST00000505081 COL6A5A8TX70 2615 aa10.35□□□□□ -0.75
DDX41-205ENST00000505081 IGKV4-1P06312 121 aa10.34□□□□□ -0.75
DDX41-205ENST00000505081 KLKP1Q107X0 134 aa10.34□□□□□ -0.75
DDX41-205ENST00000505081 F8WEM9 126 aa10.33□□□□□ -0.76
DDX41-205ENST00000505081 C4orf26Q17RF5 130 aa10.33□□□□□ -0.76
DDX41-205ENST00000505081 Q6ZRX8 168 aa10.32□□□□□ -0.76
DDX41-205ENST00000505081 DNAH10Q8IVF4 4471 aa10.32□□□□□ -0.76
DDX41-205ENST00000505081 F8WDY8 70 aa10.31□□□□□ -0.76
DDX41-205ENST00000505081 LYSTQ99698 3801 aa10.31□□□□□ -0.76
DDX41-205ENST00000505081 IGLV1-50A0A075B6I6 118 aa10.31□□□□□ -0.76
DDX41-205ENST00000505081 KRTAP4-16G5E9R7 235 aaPredicted RBP10.31□□□□□ -0.76
DDX41-205ENST00000505081 ERC2-IT1O76042 136 aa10.3□□□□□ -0.76
DDX41-205ENST00000505081 Q5XG85 94 aa10.3□□□□□ -0.76
DDX41-205ENST00000505081 MRAPQ8TCY5 172 aa10.3□□□□□ -0.76
DDX41-205ENST00000505081 ETDCA0A1B0GVM5 59 aa10.3□□□□□ -0.76
DDX41-205ENST00000505081 IGLV5-48A0A075B6I7 105 aa10.3□□□□□ -0.76
DDX41-205ENST00000505081 A0A1W2PNM2 257 aa10.3□□□□□ -0.76
DDX41-205ENST00000505081 TLX1NBP0CAT3 122 aa10.3□□□□□ -0.76
DDX41-205ENST00000505081 HUWE1Q7Z6Z7 4374 aaKnown RBP10.29□□□□□ -0.76
DDX41-205ENST00000505081 DHRS4-AS1Q9P1J3 65 aa10.27□□□□□ -0.76
DDX41-205ENST00000505081 HRCT1Q6UXD1 115 aa10.26□□□□□ -0.77
DDX41-205ENST00000505081 PLA2G2DQ9UNK4 145 aa10.26□□□□□ -0.77
DDX41-205ENST00000505081 A0A0G2JQZ4 141 aa10.26□□□□□ -0.77
DDX41-205ENST00000505081 A0A1W2PNN7 141 aa10.26□□□□□ -0.77
DDX41-205ENST00000505081 SPRR1AP35321 89 aa10.26□□□□□ -0.77
DDX41-205ENST00000505081 C1orf137Q5JT78 98 aa10.26□□□□□ -0.77
DDX41-205ENST00000505081 PRYO14603 147 aa10.25□□□□□ -0.77
DDX41-205ENST00000505081 TMEM254Q8TBM7 123 aa10.25□□□□□ -0.77
DDX41-205ENST00000505081 UBE2BP63146 152 aa10.24□□□□□ -0.77
DDX41-205ENST00000505081 MRPL55Q7Z7F7 128 aaKnown RBP10.24□□□□□ -0.77
DDX41-205ENST00000505081 TNP2Q05952 138 aa10.24□□□□□ -0.77
DDX41-205ENST00000505081 FUSP35637 526 aaKnown RBP eCLIP10.23□□□□□ -0.77
DDX41-205ENST00000505081 IGLV5-37A0A075B6J1 123 aa10.23□□□□□ -0.77
DDX41-205ENST00000505081 C5orf47Q569G3 176 aa10.23□□□□□ -0.77
DDX41-205ENST00000505081 OCR1Q9BZK8 76 aa10.23□□□□□ -0.77
DDX41-205ENST00000505081 SERP1Q9Y6X1 66 aa10.23□□□□□ -0.77
DDX41-205ENST00000505081 SRRM2Q9UQ35 2752 aaKnown RBP10.21□□□□□ -0.77
DDX41-205ENST00000505081 CSMD3Q7Z407 3707 aa10.21□□□□□ -0.77
DDX41-205ENST00000505081 EPM2AB3EWF7 344 aa10.2□□□□□ -0.78
DDX41-205ENST00000505081 SMIM29Q86T20 159 aa10.2□□□□□ -0.78
DDX41-205ENST00000505081 STAB2Q8WWQ8 2551 aa10.2□□□□□ -0.78
DDX41-205ENST00000505081 Q8NBF4 154 aa10.2□□□□□ -0.78
DDX41-205ENST00000505081 FAM30AQ9NZY2 134 aa10.2□□□□□ -0.78
DDX41-205ENST00000505081 DNAH9Q9NYC9 4486 aa10.19□□□□□ -0.78
DDX41-205ENST00000505081 MGAM2Q2M2H8 2515 aa10.19□□□□□ -0.78
DDX41-205ENST00000505081 IGKV2-24A0A0C4DH68 120 aa10.18□□□□□ -0.78
DDX41-205ENST00000505081 HIGD2AQ9BW72 106 aa10.18□□□□□ -0.78
DDX41-205ENST00000505081 REG3GQ6UW15 175 aa10.17□□□□□ -0.78
DDX41-205ENST00000505081 COL7A1Q02388 2944 aa10.17□□□□□ -0.78
DDX41-205ENST00000505081 TENM2Q9NT68 2774 aa10.17□□□□□ -0.78
DDX41-205ENST00000505081 KRTAP1-5Q9BYS1 174 aa10.17□□□□□ -0.78
DDX41-205ENST00000505081 PRLHP81277 87 aa10.16□□□□□ -0.78
DDX41-205ENST00000505081 A0A0U1RQV1 116 aa10.16□□□□□ -0.78
DDX41-205ENST00000505081 K7EIL1 84 aa10.15□□□□□ -0.78
DDX41-205ENST00000505081 NDUFC1O43677 76 aa10.15□□□□□ -0.78
DDX41-205ENST00000505081 DSCR10P59022 87 aa10.15□□□□□ -0.78
DDX41-205ENST00000505081 A0A096LNI7 61 aa10.15□□□□□ -0.78
DDX41-205ENST00000505081 K7EQZ3 153 aa10.14□□□□□ -0.79
DDX41-205ENST00000505081 DEFB116Q30KQ4 102 aa10.14□□□□□ -0.79
DDX41-205ENST00000505081 LINC00476Q8WZB0 136 aa10.14□□□□□ -0.79
DDX41-205ENST00000505081 SPRR4Q96PI1 79 aa10.14□□□□□ -0.79
DDX41-205ENST00000505081 LINC00474Q9P2X8 69 aa10.14□□□□□ -0.79
DDX41-205ENST00000505081 FP248Q71RG6 208 aaPredicted RBP10.13□□□□□ -0.79
DDX41-205ENST00000505081 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.1□□□□□ -0.79
DDX41-205ENST00000505081 IGFL1Q6UW32 110 aa10.1□□□□□ -0.79
DDX41-205ENST00000505081 FAM229BQ4G0N7 80 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms