RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 SPANXB1Q9NS25 103 aaPredicted RBP7.37□□□□□ -1.23
DDX41-204ENST00000504807 E9PLD3 99 aa7.36□□□□□ -1.23
DDX41-204ENST00000504807 HIST1H2BKO60814 126 aa7.36□□□□□ -1.23
DDX41-204ENST00000504807 HIST1H2BJP06899 126 aa7.36□□□□□ -1.23
DDX41-204ENST00000504807 HIST1H2BOP23527 126 aa7.36□□□□□ -1.23
DDX41-204ENST00000504807 HIST1H2BBP33778 126 aa7.36□□□□□ -1.23
DDX41-204ENST00000504807 NMUP48645 174 aa7.36□□□□□ -1.23
DDX41-204ENST00000504807 HIST1H2BDP58876 126 aa7.36□□□□□ -1.23
DDX41-204ENST00000504807 HIST1H2BCP62807 126 aa7.36□□□□□ -1.23
DDX41-204ENST00000504807 HIST2H2BEQ16778 126 aa7.36□□□□□ -1.23
DDX41-204ENST00000504807 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.36□□□□□ -1.23
DDX41-204ENST00000504807 HIST1H2BHQ93079 126 aa7.36□□□□□ -1.23
DDX41-204ENST00000504807 HIST1H2BNQ99877 126 aa7.36□□□□□ -1.23
DDX41-204ENST00000504807 HIST1H2BMQ99879 126 aa7.36□□□□□ -1.23
DDX41-204ENST00000504807 TTTY13Q9BZ97 58 aa7.36□□□□□ -1.23
DDX41-204ENST00000504807 NDUFC2O95298 119 aa7.35□□□□□ -1.23
DDX41-204ENST00000504807 HERVK_113P61574 105 aa7.35□□□□□ -1.23
DDX41-204ENST00000504807 TRAV23DV6A0A075B6W5 121 aa7.34□□□□□ -1.23
DDX41-204ENST00000504807 SYS1-DBNDD2H3BUS1 97 aa7.34□□□□□ -1.23
DDX41-204ENST00000504807 FP248Q71RG6 208 aaPredicted RBP7.34□□□□□ -1.23
DDX41-204ENST00000504807 Q8N377 158 aa7.34□□□□□ -1.23
DDX41-204ENST00000504807 ZNF73O43830 326 aaPredicted RBP7.32□□□□□ -1.24
DDX41-204ENST00000504807 SPINK1P00995 79 aa7.32□□□□□ -1.24
DDX41-204ENST00000504807 C4orf48Q5BLP8 95 aa7.32□□□□□ -1.24
DDX41-204ENST00000504807 S100A7L2Q5SY68 101 aa7.32□□□□□ -1.24
DDX41-204ENST00000504807 LINC01545Q5VT33 79 aa7.31□□□□□ -1.24
DDX41-204ENST00000504807 LINC00308Q8TCZ7 52 aa7.31□□□□□ -1.24
DDX41-204ENST00000504807 MIEN1Q9BRT3 115 aa7.31□□□□□ -1.24
DDX41-204ENST00000504807 ASB16-AS1Q495Z4 193 aa7.29□□□□□ -1.24
DDX41-204ENST00000504807 SSBP3-AS1Q7Z2R9 100 aa7.29□□□□□ -1.24
DDX41-204ENST00000504807 C3orf79P0CE67 100 aa7.28□□□□□ -1.24
DDX41-204ENST00000504807 RPS29P62273 56 aaKnown RBP7.27□□□□□ -1.25
DDX41-204ENST00000504807 S100A12P80511 92 aa7.27□□□□□ -1.25
DDX41-204ENST00000504807 C9orf153Q5TBE3 101 aa7.26□□□□□ -1.25
DDX41-204ENST00000504807 SPANXCQ9NY87 97 aa7.26□□□□□ -1.25
DDX41-204ENST00000504807 ZNF815PA8K554 130 aa7.25□□□□□ -1.25
DDX41-204ENST00000504807 TIMM17BO60830 172 aa7.25□□□□□ -1.25
DDX41-204ENST00000504807 ANKRD39Q53RE8 183 aa7.25□□□□□ -1.25
DDX41-204ENST00000504807 PET117Q6UWS5 81 aa7.25□□□□□ -1.25
DDX41-204ENST00000504807 SPRR1BP22528 89 aa7.24□□□□□ -1.25
DDX41-204ENST00000504807 JOSD1Q15040 202 aaPredicted RBP7.24□□□□□ -1.25
DDX41-204ENST00000504807 OR13C6PQ8NH95 151 aa7.24□□□□□ -1.25
DDX41-204ENST00000504807 XP32Q5T750 250 aa7.23□□□□□ -1.25
DDX41-204ENST00000504807 LCE2CQ5TA81 110 aa7.23□□□□□ -1.25
DDX41-204ENST00000504807 SLC25A20O43772 301 aa7.22□□□□□ -1.25
DDX41-204ENST00000504807 ELOF1P60002 83 aaKnown RBP7.22□□□□□ -1.25
DDX41-204ENST00000504807 COA6Q5JTJ3 125 aaKnown RBP7.22□□□□□ -1.25
DDX41-204ENST00000504807 HRCT1Q6UXD1 115 aa7.22□□□□□ -1.25
DDX41-204ENST00000504807 ATOH7Q8N100 152 aa7.22□□□□□ -1.25
DDX41-204ENST00000504807 CFC1BP0CG36 223 aa7.21□□□□□ -1.26
DDX41-204ENST00000504807 KRTDAPP60985 99 aa7.21□□□□□ -1.26
DDX41-204ENST00000504807 C6orf99Q4VX62 202 aa7.21□□□□□ -1.26
DDX41-204ENST00000504807 SPANXDQ9BXN6 97 aa7.21□□□□□ -1.26
DDX41-204ENST00000504807 A0A0G2JQZ4 141 aa7.2□□□□□ -1.26
DDX41-204ENST00000504807 MT1HP80294 61 aa7.2□□□□□ -1.26
DDX41-204ENST00000504807 SSPOA2VEC9 5147 aa7.19□□□□□ -1.26
DDX41-204ENST00000504807 LORP23490 312 aaPredicted RBP7.19□□□□□ -1.26
DDX41-204ENST00000504807 KRTAP19-2Q3LHN2 52 aa7.19□□□□□ -1.26
DDX41-204ENST00000504807 SMIM29Q86T20 159 aa7.19□□□□□ -1.26
DDX41-204ENST00000504807 PCP2Q8IVA1 136 aa7.19□□□□□ -1.26
DDX41-204ENST00000504807 C5orf52A6NGY3 159 aa7.18□□□□□ -1.26
DDX41-204ENST00000504807 COX7BP24311 80 aa7.18□□□□□ -1.26
DDX41-204ENST00000504807 Q1RN00 199 aa7.18□□□□□ -1.26
DDX41-204ENST00000504807 SYNE2Q8WXH0 6885 aaKnown RBP7.17□□□□□ -1.26
DDX41-204ENST00000504807 DEFB105AQ8NG35 78 aa7.17□□□□□ -1.26
DDX41-204ENST00000504807 DHRS4-AS1Q9P1J3 65 aa7.17□□□□□ -1.26
DDX41-204ENST00000504807 KRTAP10-6P60371 365 aaPredicted RBP7.16□□□□□ -1.26
DDX41-204ENST00000504807 SEC61BP60468 96 aaKnown RBP7.16□□□□□ -1.26
DDX41-204ENST00000504807 USH2AO75445 5202 aa7.15□□□□□ -1.26
DDX41-204ENST00000504807 HINT1P49773 126 aaPredicted RBP7.15□□□□□ -1.26
DDX41-204ENST00000504807 MUSTN1Q8IVN3 82 aa7.15□□□□□ -1.26
DDX41-204ENST00000504807 C9orf92A6NGG3 77 aa7.14□□□□□ -1.27
DDX41-204ENST00000504807 H7C2G1 150 aa7.14□□□□□ -1.27
DDX41-204ENST00000504807 SCGB1D4Q6XE38 83 aa7.14□□□□□ -1.27
DDX41-204ENST00000504807 LINC00518Q8N0U6 118 aa7.13□□□□□ -1.27
DDX41-204ENST00000504807 IGLV5-48A0A075B6I7 105 aa7.12□□□□□ -1.27
DDX41-204ENST00000504807 LAMTOR3Q9UHA4 124 aa7.12□□□□□ -1.27
DDX41-204ENST00000504807 CBY1Q9Y3M2 126 aa7.12□□□□□ -1.27
DDX41-204ENST00000504807 TAL2Q16559 108 aa7.11□□□□□ -1.27
DDX41-204ENST00000504807 PCOTHQ58A44 107 aa7.11□□□□□ -1.27
DDX41-204ENST00000504807 TRBV7-6A0A0J9YX20 115 aa7.1□□□□□ -1.27
DDX41-204ENST00000504807 TEX49A0A1B0GTD5 131 aa7.1□□□□□ -1.27
DDX41-204ENST00000504807 A6NDN8 102 aa7.1□□□□□ -1.27
DDX41-204ENST00000504807 SMIM11BQ8TCY0 68 aa7.1□□□□□ -1.27
DDX41-204ENST00000504807 MACF1Q9UPN3 7388 aaKnown RBP7.1□□□□□ -1.27
DDX41-204ENST00000504807 FCGBPQ9Y6R7 5405 aaPredicted RBP7.09□□□□□ -1.27
DDX41-204ENST00000504807 IFITM1P13164 125 aa7.09□□□□□ -1.27
DDX41-204ENST00000504807 LIMD2Q9BT23 127 aa7.09□□□□□ -1.27
DDX41-204ENST00000504807 A0A1B0GWB2 263 aa7.08□□□□□ -1.28
DDX41-204ENST00000504807 C20orf202A1L168 122 aa7.08□□□□□ -1.28
DDX41-204ENST00000504807 C1orf195Q5TG92 126 aa7.08□□□□□ -1.28
DDX41-204ENST00000504807 SLC25A34Q6PIV7 304 aa7.08□□□□□ -1.28
DDX41-204ENST00000504807 HIST3H2BBQ8N257 126 aa7.08□□□□□ -1.28
DDX41-204ENST00000504807 PRO1933Q9H354 126 aa7.08□□□□□ -1.28
DDX41-204ENST00000504807 CD164Q04900 197 aa7.07□□□□□ -1.28
DDX41-204ENST00000504807 HIST1H2BLQ99880 126 aa7.07□□□□□ -1.28
DDX41-204ENST00000504807 M0R2T5 61 aa7.06□□□□□ -1.28
DDX41-204ENST00000504807 Q5XG85 94 aa7.05□□□□□ -1.28
DDX41-204ENST00000504807 Q6ZVH6 145 aa7.05□□□□□ -1.28
DDX41-204ENST00000504807 IGLV8-61A0A075B6I0 122 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms