RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ABCA13Q86UQ4 5058 aa7.28□□□□□ -1.24
PDLIM5-208ENST00000504489 BCE1O60756 84 aa7.27□□□□□ -1.25
PDLIM5-208ENST00000504489 REG3GQ6UW15 175 aa7.27□□□□□ -1.25
PDLIM5-208ENST00000504489 C14orf144Q96I85 54 aa7.27□□□□□ -1.25
PDLIM5-208ENST00000504489 PCLOQ9Y6V0 5065 aa7.27□□□□□ -1.25
PDLIM5-208ENST00000504489 TRBV10-3A0A0K0K1G6 114 aa7.26□□□□□ -1.25
PDLIM5-208ENST00000504489 KCNQ1DNQ9H478 68 aa7.26□□□□□ -1.25
PDLIM5-208ENST00000504489 PRYO14603 147 aa7.25□□□□□ -1.25
PDLIM5-208ENST00000504489 ZNF861PO60384 105 aa7.25□□□□□ -1.25
PDLIM5-208ENST00000504489 IGLV6-57P01721 117 aa7.25□□□□□ -1.25
PDLIM5-208ENST00000504489 MUSTN1Q8IVN3 82 aa7.25□□□□□ -1.25
PDLIM5-208ENST00000504489 LINC00518Q8N0U6 118 aa7.25□□□□□ -1.25
PDLIM5-208ENST00000504489 TMEM126AQ9H061 195 aa7.25□□□□□ -1.25
PDLIM5-208ENST00000504489 DDTP30046 118 aa7.24□□□□□ -1.25
PDLIM5-208ENST00000504489 S100A12P80511 92 aa7.24□□□□□ -1.25
PDLIM5-208ENST00000504489 S100A7L2Q5SY68 101 aa7.24□□□□□ -1.25
PDLIM5-208ENST00000504489 SLC25A34Q6PIV7 304 aa7.24□□□□□ -1.25
PDLIM5-208ENST00000504489 DIRC1Q969H9 104 aa7.24□□□□□ -1.25
PDLIM5-208ENST00000504489 SPRR1AP35321 89 aa7.23□□□□□ -1.25
PDLIM5-208ENST00000504489 RPL28P46779 137 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-208ENST00000504489 KRTAP13-1Q8IUC0 172 aa7.23□□□□□ -1.25
PDLIM5-208ENST00000504489 HIGD1BQ9P298 99 aa7.23□□□□□ -1.25
PDLIM5-208ENST00000504489 H0Y9J4 135 aa7.22□□□□□ -1.25
PDLIM5-208ENST00000504489 OXTP01178 125 aa7.22□□□□□ -1.25
PDLIM5-208ENST00000504489 LINC00337Q8N6G1 96 aa7.22□□□□□ -1.25
PDLIM5-208ENST00000504489 CBY1Q9Y3M2 126 aa7.22□□□□□ -1.25
PDLIM5-208ENST00000504489 KRTAP29-1A8MX34 341 aaPredicted RBP7.21□□□□□ -1.26
PDLIM5-208ENST00000504489 KRTAP4-16G5E9R7 235 aaPredicted RBP7.21□□□□□ -1.26
PDLIM5-208ENST00000504489 UBE2AP49459 152 aa7.21□□□□□ -1.26
PDLIM5-208ENST00000504489 C2orf91Q6ZV80 131 aa7.21□□□□□ -1.26
PDLIM5-208ENST00000504489 FAM19A1Q7Z5A9 133 aa7.21□□□□□ -1.26
PDLIM5-208ENST00000504489 HIST1H4GQ99525 98 aa7.21□□□□□ -1.26
PDLIM5-208ENST00000504489 OR13C6PQ8NH95 151 aa7.2□□□□□ -1.26
PDLIM5-208ENST00000504489 TRAV23DV6A0A075B6W5 121 aa7.19□□□□□ -1.26
PDLIM5-208ENST00000504489 PRLHP81277 87 aa7.19□□□□□ -1.26
PDLIM5-208ENST00000504489 MYCBP2O75592 4640 aa7.18□□□□□ -1.26
PDLIM5-208ENST00000504489 LOC105371267A0A1B0GV96 52 aa7.18□□□□□ -1.26
PDLIM5-208ENST00000504489 ETDCA0A1B0GVM5 59 aa7.18□□□□□ -1.26
PDLIM5-208ENST00000504489 A4D1N5 150 aa7.18□□□□□ -1.26
PDLIM5-208ENST00000504489 SMIM6P0DI80 62 aa7.18□□□□□ -1.26
PDLIM5-208ENST00000504489 TRAV13-2A0A0B4J235 113 aa7.17□□□□□ -1.26
PDLIM5-208ENST00000504489 ZNF73O43830 326 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-208ENST00000504489 TAL2Q16559 108 aa7.17□□□□□ -1.26
PDLIM5-208ENST00000504489 LINC01600Q96MT4 127 aa7.17□□□□□ -1.26
PDLIM5-208ENST00000504489 LRP1Q07954 4544 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-208ENST00000504489 A6NDN8 102 aa7.16□□□□□ -1.26
PDLIM5-208ENST00000504489 B5MCH6 92 aa7.16□□□□□ -1.26
PDLIM5-208ENST00000504489 UQCR10Q9UDW1 63 aa7.16□□□□□ -1.26
PDLIM5-208ENST00000504489 FAT3Q8TDW7 4589 aa7.16□□□□□ -1.26
PDLIM5-208ENST00000504489 KRTAP1-4P0C5Y4 121 aa7.15□□□□□ -1.26
PDLIM5-208ENST00000504489 DMBT1Q9UGM3 2413 aaPredicted RBP7.15□□□□□ -1.27
PDLIM5-208ENST00000504489 HINT1P49773 126 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-208ENST00000504489 Q6ZRX8 168 aa7.14□□□□□ -1.27
PDLIM5-208ENST00000504489 HIGD2AQ9BW72 106 aa7.14□□□□□ -1.27
PDLIM5-208ENST00000504489 KRTAP4-2Q9BYR5 136 aa7.14□□□□□ -1.27
PDLIM5-208ENST00000504489 CEND1Q8N111 149 aa7.13□□□□□ -1.27
PDLIM5-208ENST00000504489 TRBV7-6A0A0J9YX20 115 aa7.12□□□□□ -1.27
PDLIM5-208ENST00000504489 MT1HL1P0DM35 61 aa7.12□□□□□ -1.27
PDLIM5-208ENST00000504489 KRTAP10-8P60410 259 aa7.12□□□□□ -1.27
PDLIM5-208ENST00000504489 C6orf99Q4VX62 202 aa7.12□□□□□ -1.27
PDLIM5-208ENST00000504489 SMCR5Q8TEV8 140 aa7.12□□□□□ -1.27
PDLIM5-208ENST00000504489 CFC1BP0CG36 223 aa7.11□□□□□ -1.27
PDLIM5-208ENST00000504489 CFC1P0CG37 223 aa7.11□□□□□ -1.27
PDLIM5-208ENST00000504489 HSD52Q0P140 79 aa7.11□□□□□ -1.27
PDLIM5-208ENST00000504489 SMIM11BQ8TCY0 68 aa7.11□□□□□ -1.27
PDLIM5-208ENST00000504489 Q9BRP9 147 aa7.11□□□□□ -1.27
PDLIM5-208ENST00000504489 KRTAP4-11Q9BYQ6 195 aa7.11□□□□□ -1.27
PDLIM5-208ENST00000504489 A0A0B4J2C4 111 aa7.1□□□□□ -1.27
PDLIM5-208ENST00000504489 ELOF1P60002 83 aaKnown RBP7.1□□□□□ -1.27
PDLIM5-208ENST00000504489 C12orf57Q99622 126 aa7.1□□□□□ -1.27
PDLIM5-208ENST00000504489 PRO1933Q9H354 126 aa7.1□□□□□ -1.27
PDLIM5-208ENST00000504489 A0A1B0GWB2 263 aa7.09□□□□□ -1.27
PDLIM5-208ENST00000504489 COX7BP24311 80 aa7.09□□□□□ -1.27
PDLIM5-208ENST00000504489 LCE5AQ5TCM9 118 aa7.09□□□□□ -1.27
PDLIM5-208ENST00000504489 ZNF706Q9Y5V0 76 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-208ENST00000504489 ERC2-IT1O76042 136 aa7.08□□□□□ -1.28
PDLIM5-208ENST00000504489 RPL13AP40429 203 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-208ENST00000504489 FXYD2P54710 66 aa7.08□□□□□ -1.28
PDLIM5-208ENST00000504489 FAM229BQ4G0N7 80 aa7.08□□□□□ -1.28
PDLIM5-208ENST00000504489 PRR26Q8N8Z3 221 aa7.08□□□□□ -1.28
PDLIM5-208ENST00000504489 RAB37Q96AX2 223 aa7.08□□□□□ -1.28
PDLIM5-208ENST00000504489 SPRR4Q96PI1 79 aa7.08□□□□□ -1.28
PDLIM5-208ENST00000504489 DHRS4-AS1Q9P1J3 65 aa7.08□□□□□ -1.28
PDLIM5-208ENST00000504489 TNXBP22105 4242 aa7.07□□□□□ -1.28
PDLIM5-208ENST00000504489 CRYGAP11844 174 aa7.06□□□□□ -1.28
PDLIM5-208ENST00000504489 VAMP3Q15836 100 aa7.06□□□□□ -1.28
PDLIM5-208ENST00000504489 KRTAP9-3Q9BYQ3 159 aa7.06□□□□□ -1.28
PDLIM5-208ENST00000504489 ANAPC11Q9NYG5 84 aa7.06□□□□□ -1.28
PDLIM5-208ENST00000504489 A0A087X002 238 aa7.05□□□□□ -1.28
PDLIM5-208ENST00000504489 PRO1854Q9UHT4 67 aa7.05□□□□□ -1.28
PDLIM5-208ENST00000504489 TSTD3H0UI37 97 aa7.04□□□□□ -1.28
PDLIM5-208ENST00000504489 LINC00483Q53H64 154 aa7.04□□□□□ -1.28
PDLIM5-208ENST00000504489 H7C2G1 150 aa7.03□□□□□ -1.28
PDLIM5-208ENST00000504489 NHP2Q9NX24 153 aaKnown RBP7.03□□□□□ -1.28
PDLIM5-208ENST00000504489 KRTAP13-2Q52LG2 175 aa7.02□□□□□ -1.29
PDLIM5-208ENST00000504489 BVES-AS1Q5T3Y7 98 aa7.02□□□□□ -1.29
PDLIM5-208ENST00000504489 GAGE2AQ6NT46 116 aa7.02□□□□□ -1.29
PDLIM5-208ENST00000504489 CTAG1AP78358 180 aa7.01□□□□□ -1.29
PDLIM5-208ENST00000504489 LINC00575Q6W349 94 aa7.01□□□□□ -1.29
PDLIM5-208ENST00000504489 ST20-AS1Q8NBB2 130 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms