RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 RETNQ9HD89 108 aa5.09□□□□□ -1.59
NEDD9-208ENST00000504387 OTOGQ6ZRI0 2925 aa5.09□□□□□ -1.59
NEDD9-208ENST00000504387 COL6A5A8TX70 2615 aa5.09□□□□□ -1.59
NEDD9-208ENST00000504387 CXCL6P80162 114 aa5.09□□□□□ -1.59
NEDD9-208ENST00000504387 COX17Q14061 63 aa5.09□□□□□ -1.59
NEDD9-208ENST00000504387 TRRAPQ9Y4A5 3859 aa5.09□□□□□ -1.6
NEDD9-208ENST00000504387 IGLV6-57P01721 117 aa5.08□□□□□ -1.6
NEDD9-208ENST00000504387 KRTAP10-3P60369 221 aa5.08□□□□□ -1.6
NEDD9-208ENST00000504387 FBN1P35555 2871 aaKnown RBP5.08□□□□□ -1.6
NEDD9-208ENST00000504387 V9GYY9 64 aa5.08□□□□□ -1.6
NEDD9-208ENST00000504387 X6R8D5 127 aa5.08□□□□□ -1.6
NEDD9-208ENST00000504387 A8MU10 97 aa5.07□□□□□ -1.6
NEDD9-208ENST00000504387 IGKV4-1P06312 121 aa5.07□□□□□ -1.6
NEDD9-208ENST00000504387 MGAM2Q2M2H8 2515 aa5.07□□□□□ -1.6
NEDD9-208ENST00000504387 EPM2AB3EWF7 344 aa5.07□□□□□ -1.6
NEDD9-208ENST00000504387 ESRGQ1W209 222 aa5.07□□□□□ -1.6
NEDD9-208ENST00000504387 LINC00612Q8N6U2 182 aa5.07□□□□□ -1.6
NEDD9-208ENST00000504387 SRRM2Q9UQ35 2752 aaKnown RBP5.06□□□□□ -1.6
NEDD9-208ENST00000504387 SEC61GP60059 68 aa5.06□□□□□ -1.6
NEDD9-208ENST00000504387 Q6ZRU5 148 aa5.06□□□□□ -1.6
NEDD9-208ENST00000504387 CSMD3Q7Z407 3707 aa5.06□□□□□ -1.6
NEDD9-208ENST00000504387 IGKV2D-24A0A075B6R9 120 aa5.06□□□□□ -1.6
NEDD9-208ENST00000504387 SPART-AS1P0CW21 52 aa5.06□□□□□ -1.6
NEDD9-208ENST00000504387 APOC4P55056 127 aa5.05□□□□□ -1.6
NEDD9-208ENST00000504387 WFDC10BQ8IUB3 73 aa5.05□□□□□ -1.6
NEDD9-208ENST00000504387 J3QKU1 62 aa5.04□□□□□ -1.6
NEDD9-208ENST00000504387 PDE6GP18545 87 aa5.04□□□□□ -1.6
NEDD9-208ENST00000504387 ST20-AS1Q8NBB2 130 aa5.04□□□□□ -1.6
NEDD9-208ENST00000504387 NDUFC1O43677 76 aa5.04□□□□□ -1.6
NEDD9-208ENST00000504387 C9orf66Q5T8R8 295 aa5.04□□□□□ -1.6
NEDD9-208ENST00000504387 WFDC13Q8IUB5 93 aa5.04□□□□□ -1.6
NEDD9-208ENST00000504387 ELOF1P60002 83 aaKnown RBP5.04□□□□□ -1.6
NEDD9-208ENST00000504387 OCR1Q9BZK8 76 aa5.04□□□□□ -1.6
NEDD9-208ENST00000504387 NSD1Q96L73 2696 aaPredicted RBP5.04□□□□□ -1.6
NEDD9-208ENST00000504387 KRTAP1-1Q07627 177 aa5.03□□□□□ -1.6
NEDD9-208ENST00000504387 C1orf64Q8NEQ6 169 aa5.03□□□□□ -1.6
NEDD9-208ENST00000504387 A0A0J9YWU9 116 aa5.03□□□□□ -1.6
NEDD9-208ENST00000504387 IGHV4-30-4P0DP06 118 aa5.03□□□□□ -1.6
NEDD9-208ENST00000504387 Q6ZTC4 211 aa5.03□□□□□ -1.6
NEDD9-208ENST00000504387 LYRM9A8MSI8 78 aa5.02□□□□□ -1.61
NEDD9-208ENST00000504387 VPREB1P12018 145 aa5.02□□□□□ -1.61
NEDD9-208ENST00000504387 FAM168BA1KXE4 195 aa5.02□□□□□ -1.61
NEDD9-208ENST00000504387 Q6ZRP5 223 aa5.02□□□□□ -1.61
NEDD9-208ENST00000504387 NKAPP1Q8N9T2 125 aa5.02□□□□□ -1.61
NEDD9-208ENST00000504387 TENM3Q9P273 2699 aa5.01□□□□□ -1.61
NEDD9-208ENST00000504387 F8WDY8 70 aa5.01□□□□□ -1.61
NEDD9-208ENST00000504387 K7EQZ3 153 aa5.01□□□□□ -1.61
NEDD9-208ENST00000504387 A8MUN3 132 aa5.01□□□□□ -1.61
NEDD9-208ENST00000504387 KPRPQ5T749 579 aaPredicted RBP5.01□□□□□ -1.61
NEDD9-208ENST00000504387 SERTAD4-AS1Q5TG53 156 aa5.01□□□□□ -1.61
NEDD9-208ENST00000504387 Q8N377 158 aa5.01□□□□□ -1.61
NEDD9-208ENST00000504387 LINC00528Q8N1L1 170 aa5□□□□□ -1.61
NEDD9-208ENST00000504387 SPTSSBQ8NFR3 76 aa5□□□□□ -1.61
NEDD9-208ENST00000504387 A0A096LNI7 61 aa5□□□□□ -1.61
NEDD9-208ENST00000504387 M0R378 163 aa5□□□□□ -1.61
NEDD9-208ENST00000504387 BCE1O60756 84 aa5□□□□□ -1.61
NEDD9-208ENST00000504387 COL7A1Q02388 2944 aa4.99□□□□□ -1.61
NEDD9-208ENST00000504387 RPL37AP61513 92 aaKnown RBP4.99□□□□□ -1.61
NEDD9-208ENST00000504387 LELP1Q5T871 98 aa4.99□□□□□ -1.61
NEDD9-208ENST00000504387 A0A1W2PNM2 257 aa4.99□□□□□ -1.61
NEDD9-208ENST00000504387 C1orf137Q5JT78 98 aa4.99□□□□□ -1.61
NEDD9-208ENST00000504387 UBE2BP63146 152 aa4.99□□□□□ -1.61
NEDD9-208ENST00000504387 ATP5EP56381 51 aaPredicted RBP4.98□□□□□ -1.61
NEDD9-208ENST00000504387 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.97□□□□□ -1.61
NEDD9-208ENST00000504387 ERC2-IT1O76042 136 aa4.97□□□□□ -1.61
NEDD9-208ENST00000504387 C7orf33Q8WU49 177 aa4.97□□□□□ -1.61
NEDD9-208ENST00000504387 TRAV22A0A0B4J277 110 aa4.97□□□□□ -1.61
NEDD9-208ENST00000504387 hDV103S1A0JD37 113 aa4.97□□□□□ -1.61
NEDD9-208ENST00000504387 Q8NAQ8 132 aa4.97□□□□□ -1.61
NEDD9-208ENST00000504387 LINC00208Q96KT6 92 aa4.97□□□□□ -1.61
NEDD9-208ENST00000504387 PMAIP1Q13794 54 aa4.97□□□□□ -1.61
NEDD9-208ENST00000504387 ETDCA0A1B0GVM5 59 aa4.96□□□□□ -1.62
NEDD9-208ENST00000504387 C15orf56Q8N910 161 aa4.95□□□□□ -1.62
NEDD9-208ENST00000504387 DEFB131BA0A096LNP1 70 aa4.95□□□□□ -1.62
NEDD9-208ENST00000504387 SYCNQ0VAF6 134 aa4.95□□□□□ -1.62
NEDD9-208ENST00000504387 PRR34Q9NV39 138 aa4.95□□□□□ -1.62
NEDD9-208ENST00000504387 ANK3Q12955 4377 aaKnown RBP4.94□□□□□ -1.62
NEDD9-208ENST00000504387 CHKB-CPT1BH3BT56 60 aa4.94□□□□□ -1.62
NEDD9-208ENST00000504387 DSCR10P59022 87 aa4.94□□□□□ -1.62
NEDD9-208ENST00000504387 Q9BRP9 147 aa4.94□□□□□ -1.62
NEDD9-208ENST00000504387 IGKV2-24A0A0C4DH68 120 aa4.94□□□□□ -1.62
NEDD9-208ENST00000504387 EGFEM1PQ0D2K5 195 aa4.94□□□□□ -1.62
NEDD9-208ENST00000504387 CASC10Q5T4H9 136 aa4.93□□□□□ -1.62
NEDD9-208ENST00000504387 A0A087WSZ3 146 aa4.93□□□□□ -1.62
NEDD9-208ENST00000504387 PSCAO43653 123 aa4.93□□□□□ -1.62
NEDD9-208ENST00000504387 C11orf45Q8TAV5 145 aa4.92□□□□□ -1.62
NEDD9-208ENST00000504387 PRLHP81277 87 aa4.92□□□□□ -1.62
NEDD9-208ENST00000504387 H3BQ85 93 aa4.91□□□□□ -1.62
NEDD9-208ENST00000504387 PRR15LQ9BU68 103 aa4.91□□□□□ -1.62
NEDD9-208ENST00000504387 GVQW2A0A096LPI5 108 aaPredicted RBP4.91□□□□□ -1.62
NEDD9-208ENST00000504387 HCG22E2RYF7 251 aa4.91□□□□□ -1.62
NEDD9-208ENST00000504387 PCOTHQ58A44 107 aa4.9□□□□□ -1.62
NEDD9-208ENST00000504387 Q8NBF4 154 aa4.9□□□□□ -1.62
NEDD9-208ENST00000504387 Q6ZRX8 168 aa4.89□□□□□ -1.63
NEDD9-208ENST00000504387 LINC00476Q8WZB0 136 aa4.89□□□□□ -1.63
NEDD9-208ENST00000504387 TENM2Q9NT68 2774 aa4.89□□□□□ -1.63
NEDD9-208ENST00000504387 MP68P56378 58 aa4.89□□□□□ -1.63
NEDD9-208ENST00000504387 KRTAP10-11P60412 298 aa4.89□□□□□ -1.63
NEDD9-208ENST00000504387 IGLV5-48A0A075B6I7 105 aa4.88□□□□□ -1.63
NEDD9-208ENST00000504387 B9D2Q9BPU9 175 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms