RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 C14orf132Q9NPU4 83 aa6.35□□□□□ -1.39
COL1A1-210ENST00000504289 DHRS4-AS1Q9P1J3 65 aa6.35□□□□□ -1.39
COL1A1-210ENST00000504289 SPRR1AP35321 89 aa6.34□□□□□ -1.39
COL1A1-210ENST00000504289 RBM3P98179 157 aaKnown RBP6.34□□□□□ -1.39
COL1A1-210ENST00000504289 Q6ZQY7 126 aa6.34□□□□□ -1.39
COL1A1-210ENST00000504289 PRKDCP78527 4128 aaKnown RBP6.33□□□□□ -1.4
COL1A1-210ENST00000504289 IGLV1-50A0A075B6I6 118 aa6.33□□□□□ -1.4
COL1A1-210ENST00000504289 NBDYA0A0U1RRE5 68 aa6.33□□□□□ -1.4
COL1A1-210ENST00000504289 C16orf90A8MZG2 172 aa6.33□□□□□ -1.4
COL1A1-210ENST00000504289 SERTAD4-AS1Q5TG53 156 aa6.33□□□□□ -1.4
COL1A1-210ENST00000504289 KRTAP1-5Q9BYS1 174 aa6.33□□□□□ -1.4
COL1A1-210ENST00000504289 LAMTOR3Q9UHA4 124 aa6.32□□□□□ -1.4
COL1A1-210ENST00000504289 NDUFV3P56181 108 aaKnown RBP6.31□□□□□ -1.4
COL1A1-210ENST00000504289 ATP5EP2Q5VTU8 51 aa6.31□□□□□ -1.4
COL1A1-210ENST00000504289 MRPL55Q7Z7F7 128 aaKnown RBP6.31□□□□□ -1.4
COL1A1-210ENST00000504289 DSCR8Q96T75 97 aa6.31□□□□□ -1.4
COL1A1-210ENST00000504289 SS18L2Q9UHA2 77 aa6.31□□□□□ -1.4
COL1A1-210ENST00000504289 KRTAP4-16G5E9R7 235 aaPredicted RBP6.3□□□□□ -1.4
COL1A1-210ENST00000504289 Q6JHZ5 121 aa6.3□□□□□ -1.4
COL1A1-210ENST00000504289 Q6ZQT0 140 aa6.3□□□□□ -1.4
COL1A1-210ENST00000504289 Q6ZRX8 168 aa6.3□□□□□ -1.4
COL1A1-210ENST00000504289 LINC00474Q9P2X8 69 aa6.3□□□□□ -1.4
COL1A1-210ENST00000504289 ETDCA0A1B0GVM5 59 aa6.29□□□□□ -1.4
COL1A1-210ENST00000504289 B5MCH6 92 aa6.29□□□□□ -1.4
COL1A1-210ENST00000504289 SMCR5Q8TEV8 140 aa6.29□□□□□ -1.4
COL1A1-210ENST00000504289 TRBV7-4A0A0J9YYF1 115 aa6.28□□□□□ -1.4
COL1A1-210ENST00000504289 A0A1B0GW54 56 aa6.28□□□□□ -1.4
COL1A1-210ENST00000504289 LRCOL1A6NCL2 159 aa6.28□□□□□ -1.4
COL1A1-210ENST00000504289 C9orf163Q8N9P6 203 aa6.28□□□□□ -1.4
COL1A1-210ENST00000504289 LINC00846Q9NV44 126 aa6.28□□□□□ -1.4
COL1A1-210ENST00000504289 Q6ZRN7 208 aaPredicted RBP6.27□□□□□ -1.41
COL1A1-210ENST00000504289 KRTAP7-1Q8IUC3 87 aa6.27□□□□□ -1.41
COL1A1-210ENST00000504289 UBL5Q9BZL1 73 aa6.27□□□□□ -1.41
COL1A1-210ENST00000504289 REG3GQ6UW15 175 aa6.26□□□□□ -1.41
COL1A1-210ENST00000504289 IGLV5-48A0A075B6I7 105 aa6.25□□□□□ -1.41
COL1A1-210ENST00000504289 A0A096LNI7 61 aa6.25□□□□□ -1.41
COL1A1-210ENST00000504289 FAM168BA1KXE4 195 aa6.25□□□□□ -1.41
COL1A1-210ENST00000504289 FAM19A5Q7Z5A7 132 aaPredicted RBP6.25□□□□□ -1.41
COL1A1-210ENST00000504289 VPS13DQ5THJ4 4388 aa6.25□□□□□ -1.41
COL1A1-210ENST00000504289 DNAH7Q8WXX0 4024 aa6.25□□□□□ -1.41
COL1A1-210ENST00000504289 H0Y9J4 135 aa6.24□□□□□ -1.41
COL1A1-210ENST00000504289 RPL37AP8A6NKH3 93 aa6.23□□□□□ -1.41
COL1A1-210ENST00000504289 SMIM20Q8N5G0 67 aa6.23□□□□□ -1.41
COL1A1-210ENST00000504289 TENM2Q9NT68 2774 aa6.23□□□□□ -1.41
COL1A1-210ENST00000504289 EPM2AB3EWF7 344 aa6.22□□□□□ -1.41
COL1A1-210ENST00000504289 CCDC179H3BU77 68 aa6.22□□□□□ -1.41
COL1A1-210ENST00000504289 Q6ZR54 194 aa6.22□□□□□ -1.41
COL1A1-210ENST00000504289 Q8N377 158 aa6.22□□□□□ -1.41
COL1A1-210ENST00000504289 Q9BRP9 147 aa6.22□□□□□ -1.41
COL1A1-210ENST00000504289 PLECQ15149 4684 aaKnown RBP6.22□□□□□ -1.41
COL1A1-210ENST00000504289 LINC01547P58512 204 aaPredicted RBP6.21□□□□□ -1.42
COL1A1-210ENST00000504289 A0A1W2PNN7 141 aa6.2□□□□□ -1.42
COL1A1-210ENST00000504289 HIST1H4AP62805 103 aaKnown RBP6.2□□□□□ -1.42
COL1A1-210ENST00000504289 CXCL6P80162 114 aa6.2□□□□□ -1.42
COL1A1-210ENST00000504289 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.19□□□□□ -1.42
COL1A1-210ENST00000504289 IGKV2-24A0A0C4DH68 120 aa6.19□□□□□ -1.42
COL1A1-210ENST00000504289 RPS28P62857 69 aaKnown RBP6.19□□□□□ -1.42
COL1A1-210ENST00000504289 UBE2BP63146 152 aa6.19□□□□□ -1.42
COL1A1-210ENST00000504289 A0A087WTM6 91 aa6.18□□□□□ -1.42
COL1A1-210ENST00000504289 FAM236AA0A1B0GUQ0 79 aa6.18□□□□□ -1.42
COL1A1-210ENST00000504289 FAM236BA0A1B0GV22 79 aa6.18□□□□□ -1.42
COL1A1-210ENST00000504289 ATOX1O00244 68 aa6.18□□□□□ -1.42
COL1A1-210ENST00000504289 BCE1O60756 84 aa6.18□□□□□ -1.42
COL1A1-210ENST00000504289 TNP2Q05952 138 aa6.18□□□□□ -1.42
COL1A1-210ENST00000504289 C5orf47Q569G3 176 aa6.18□□□□□ -1.42
COL1A1-210ENST00000504289 CSMD3Q7Z407 3707 aa6.18□□□□□ -1.42
COL1A1-210ENST00000504289 FUSP35637 526 aaKnown RBP eCLIP6.17□□□□□ -1.42
COL1A1-210ENST00000504289 Q6ZVQ6 151 aa6.17□□□□□ -1.42
COL1A1-210ENST00000504289 KMT2CQ8NEZ4 4911 aaKnown RBP6.16□□□□□ -1.42
COL1A1-210ENST00000504289 IGLV8-61A0A075B6I0 122 aa6.16□□□□□ -1.42
COL1A1-210ENST00000504289 IGKV3D-7A0A0C4DH55 119 aa6.16□□□□□ -1.42
COL1A1-210ENST00000504289 FAM19A1Q7Z5A9 133 aa6.16□□□□□ -1.42
COL1A1-210ENST00000504289 SPRR1BP22528 89 aa6.15□□□□□ -1.42
COL1A1-210ENST00000504289 C1orf134Q5TEV5 83 aa6.15□□□□□ -1.42
COL1A1-210ENST00000504289 DEFB105AQ8NG35 78 aa6.15□□□□□ -1.42
COL1A1-210ENST00000504289 SPACA4Q8TDM5 124 aa6.15□□□□□ -1.42
COL1A1-210ENST00000504289 DNAH10Q8IVF4 4471 aa6.14□□□□□ -1.43
COL1A1-210ENST00000504289 F8WEM9 126 aa6.14□□□□□ -1.43
COL1A1-210ENST00000504289 UQCRQO14949 82 aa6.14□□□□□ -1.43
COL1A1-210ENST00000504289 C3orf22Q8N5N4 141 aa6.14□□□□□ -1.43
COL1A1-210ENST00000504289 WWC2-AS2Q96NR7 200 aa6.14□□□□□ -1.43
COL1A1-210ENST00000504289 DNAH6Q9C0G6 4158 aa6.14□□□□□ -1.43
COL1A1-210ENST00000504289 M0R2N4 97 aa6.13□□□□□ -1.43
COL1A1-210ENST00000504289 ERC2-IT1O76042 136 aa6.13□□□□□ -1.43
COL1A1-210ENST00000504289 C1orf137Q5JT78 98 aa6.13□□□□□ -1.43
COL1A1-210ENST00000504289 PHF5AQ7RTV0 110 aaKnown RBP6.13□□□□□ -1.43
COL1A1-210ENST00000504289 ST20-AS1Q8NBB2 130 aa6.13□□□□□ -1.43
COL1A1-210ENST00000504289 Q8NBF4 154 aa6.13□□□□□ -1.43
COL1A1-210ENST00000504289 SPRR4Q96PI1 79 aa6.13□□□□□ -1.43
COL1A1-210ENST00000504289 STARD9Q9P2P6 4700 aa6.13□□□□□ -1.43
COL1A1-210ENST00000504289 J3KT08 172 aa6.12□□□□□ -1.43
COL1A1-210ENST00000504289 CHTF8P0CG12 524 aa6.12□□□□□ -1.43
COL1A1-210ENST00000504289 HAMPP81172 84 aa6.12□□□□□ -1.43
COL1A1-210ENST00000504289 NREPQ16612 68 aa6.12□□□□□ -1.43
COL1A1-210ENST00000504289 SMIM29Q86T20 159 aa6.12□□□□□ -1.43
COL1A1-210ENST00000504289 RYR3Q15413 4870 aa6.12□□□□□ -1.43
COL1A1-210ENST00000504289 C3orf84H3BNL1 204 aa6.11□□□□□ -1.43
COL1A1-210ENST00000504289 RTL8CO15255 209 aa6.11□□□□□ -1.43
COL1A1-210ENST00000504289 PLAC8Q9NZF1 115 aa6.11□□□□□ -1.43
COL1A1-210ENST00000504289 LYSTQ99698 3801 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms