RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 PYGO1Q9Y3Y4 419 aa1.91□□□□□ -2.1
USP46-205ENST00000504078 A0A1B0GXF2 115 aa1.9□□□□□ -2.11
USP46-205ENST00000504078 SMIM27A0A1W2PRY6 76 aa1.9□□□□□ -2.11
USP46-205ENST00000504078 LINC00862A6NCI5 91 aa1.9□□□□□ -2.11
USP46-205ENST00000504078 IGIPA6NJ69 53 aa1.9□□□□□ -2.11
USP46-205ENST00000504078 TMEM250H0YL14 139 aa1.9□□□□□ -2.11
USP46-205ENST00000504078 H7C2G1 150 aa1.9□□□□□ -2.11
USP46-205ENST00000504078 MT1FP04733 61 aa1.9□□□□□ -2.11
USP46-205ENST00000504078 ADCYAP1P18509 176 aa1.9□□□□□ -2.11
USP46-205ENST00000504078 RPL23P62829 140 aaKnown RBP1.9□□□□□ -2.11
USP46-205ENST00000504078 CD164Q04900 197 aa1.9□□□□□ -2.11
USP46-205ENST00000504078 LINC00483Q53H64 154 aa1.9□□□□□ -2.11
USP46-205ENST00000504078 PDZD11Q5EBL8 140 aa1.9□□□□□ -2.11
USP46-205ENST00000504078 ALKAL2Q6UX46 152 aa1.9□□□□□ -2.11
USP46-205ENST00000504078 TMEM136Q6ZRR5 245 aa1.9□□□□□ -2.11
USP46-205ENST00000504078 Q6ZVH6 145 aa1.9□□□□□ -2.11
USP46-205ENST00000504078 GNB1LQ9BYB4 327 aa1.9□□□□□ -2.11
USP46-205ENST00000504078 MACF1Q9UPN3 7388 aaKnown RBP1.89□□□□□ -2.11
USP46-205ENST00000504078 HMSDA8MTL9 139 aa1.89□□□□□ -2.11
USP46-205ENST00000504078 F8W036 122 aa1.89□□□□□ -2.11
USP46-205ENST00000504078 MT2AP02795 61 aa1.89□□□□□ -2.11
USP46-205ENST00000504078 SRP19P09132 144 aaKnown RBP1.89□□□□□ -2.11
USP46-205ENST00000504078 RPL37P61927 97 aaKnown RBP1.89□□□□□ -2.11
USP46-205ENST00000504078 KIAA1644Q3SXP7 199 aa1.89□□□□□ -2.11
USP46-205ENST00000504078 ST20-AS1Q8NBB2 130 aa1.89□□□□□ -2.11
USP46-205ENST00000504078 Q9BRP9 147 aa1.89□□□□□ -2.11
USP46-205ENST00000504078 IGLV5-45A0A087WSX0 123 aa1.88□□□□□ -2.11
USP46-205ENST00000504078 A0A0G2JQZ4 141 aa1.88□□□□□ -2.11
USP46-205ENST00000504078 TRBV10-3A0A0K0K1G6 114 aa1.88□□□□□ -2.11
USP46-205ENST00000504078 A0A1B0GWB2 263 aa1.88□□□□□ -2.11
USP46-205ENST00000504078 C9JQL5 133 aa1.88□□□□□ -2.11
USP46-205ENST00000504078 CFC1P0CG37 223 aa1.88□□□□□ -2.11
USP46-205ENST00000504078 LINC00158P58513 81 aa1.88□□□□□ -2.11
USP46-205ENST00000504078 RPS29P62273 56 aaKnown RBP1.88□□□□□ -2.11
USP46-205ENST00000504078 SEC11AP67812 179 aa1.88□□□□□ -2.11
USP46-205ENST00000504078 Q8N8P6 123 aa1.88□□□□□ -2.11
USP46-205ENST00000504078 SCGB3A1Q96QR1 104 aa1.88□□□□□ -2.11
USP46-205ENST00000504078 PPBPP02775 128 aa1.87□□□□□ -2.11
USP46-205ENST00000504078 S100A8P05109 93 aa1.87□□□□□ -2.11
USP46-205ENST00000504078 ZNF22P17026 224 aaPredicted RBP1.87□□□□□ -2.11
USP46-205ENST00000504078 SPRR1AP35321 89 aa1.87□□□□□ -2.11
USP46-205ENST00000504078 NDUFA6P56556 154 aa1.87□□□□□ -2.11
USP46-205ENST00000504078 PMVKQ15126 192 aa1.87□□□□□ -2.11
USP46-205ENST00000504078 ORMDL2Q53FV1 153 aa1.87□□□□□ -2.11
USP46-205ENST00000504078 TOMM6Q96B49 74 aa1.87□□□□□ -2.11
USP46-205ENST00000504078 LIMD2Q9BT23 127 aa1.87□□□□□ -2.11
USP46-205ENST00000504078 SYNE2Q8WXH0 6885 aaKnown RBP1.87□□□□□ -2.11
USP46-205ENST00000504078 FAM240AA0A1B0GVK7 77 aa1.86□□□□□ -2.11
USP46-205ENST00000504078 H3BRM9 83 aa1.86□□□□□ -2.11
USP46-205ENST00000504078 SMIM13P0DJ93 91 aa1.86□□□□□ -2.11
USP46-205ENST00000504078 MEIG1Q5JSS6 88 aa1.86□□□□□ -2.11
USP46-205ENST00000504078 SSBP3-AS1Q7Z2R9 100 aa1.86□□□□□ -2.11
USP46-205ENST00000504078 PRAC1Q96KF2 57 aa1.86□□□□□ -2.11
USP46-205ENST00000504078 CST9LQ9H4G1 147 aa1.86□□□□□ -2.11
USP46-205ENST00000504078 NAT8Q9UHE5 227 aa1.86□□□□□ -2.11
USP46-205ENST00000504078 C11orf86A6NJI1 115 aa1.85□□□□□ -2.11
USP46-205ENST00000504078 LINC00587B1AMM8 73 aa1.85□□□□□ -2.11
USP46-205ENST00000504078 KRTAP10-10P60014 251 aa1.85□□□□□ -2.11
USP46-205ENST00000504078 NPC2P61916 151 aa1.85□□□□□ -2.11
USP46-205ENST00000504078 PMCHL1Q16048 86 aa1.85□□□□□ -2.11
USP46-205ENST00000504078 Q1RN00 199 aa1.85□□□□□ -2.11
USP46-205ENST00000504078 KRTAP20-1Q3LI63 56 aa1.85□□□□□ -2.11
USP46-205ENST00000504078 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
USP46-205ENST00000504078 TMEM170BQ5T4T1 132 aa1.85□□□□□ -2.11
USP46-205ENST00000504078 Q6ZRX8 168 aa1.85□□□□□ -2.11
USP46-205ENST00000504078 MTURNQ8N3F0 131 aa1.85□□□□□ -2.11
USP46-205ENST00000504078 SMIM20Q8N5G0 67 aa1.85□□□□□ -2.11
USP46-205ENST00000504078 MIR7-3HGQ8N6C7 128 aa1.85□□□□□ -2.11
USP46-205ENST00000504078 KCNQ1DNQ9H478 68 aa1.85□□□□□ -2.11
USP46-205ENST00000504078 NXT2Q9NPJ8 142 aaKnown RBP1.85□□□□□ -2.11
USP46-205ENST00000504078 TRAV9-1A0A075B6T8 112 aa1.84□□□□□ -2.11
USP46-205ENST00000504078 A0A1B0GV72 72 aa1.84□□□□□ -2.11
USP46-205ENST00000504078 A6NDN8 102 aa1.84□□□□□ -2.11
USP46-205ENST00000504078 IGLC3P0DOY3 106 aa1.84□□□□□ -2.11
USP46-205ENST00000504078 LGALS3P17931 250 aaKnown RBP1.84□□□□□ -2.11
USP46-205ENST00000504078 S100A1P23297 94 aa1.84□□□□□ -2.11
USP46-205ENST00000504078 DDTP30046 118 aa1.84□□□□□ -2.11
USP46-205ENST00000504078 NDUFA5Q16718 116 aa1.84□□□□□ -2.11
USP46-205ENST00000504078 LCE3AQ5TA76 89 aa1.84□□□□□ -2.11
USP46-205ENST00000504078 C1orf195Q5TG92 126 aa1.84□□□□□ -2.11
USP46-205ENST00000504078 ATP5L2Q7Z4Y8 100 aa1.84□□□□□ -2.11
USP46-205ENST00000504078 COMMD7Q86VX2 200 aa1.84□□□□□ -2.11
USP46-205ENST00000504078 SPANXB1Q9NS25 103 aaPredicted RBP1.84□□□□□ -2.11
USP46-205ENST00000504078 LAMTOR2Q9Y2Q5 125 aa1.84□□□□□ -2.11
USP46-205ENST00000504078 TRAV23DV6A0A075B6W5 121 aa1.83□□□□□ -2.12
USP46-205ENST00000504078 FAM236DA0A1B0GTK5 79 aa1.83□□□□□ -2.12
USP46-205ENST00000504078 FAM236CP0DP71 79 aa1.83□□□□□ -2.12
USP46-205ENST00000504078 COX17Q14061 63 aa1.83□□□□□ -2.12
USP46-205ENST00000504078 KRTAP19-6Q3LI70 58 aa1.83□□□□□ -2.12
USP46-205ENST00000504078 DEFB105AQ8NG35 78 aa1.83□□□□□ -2.12
USP46-205ENST00000504078 OBSCN-AS1Q96MR7 158 aa1.83□□□□□ -2.12
USP46-205ENST00000504078 SIGMAR1Q99720 223 aa1.83□□□□□ -2.12
USP46-205ENST00000504078 A0A096LNJ9 63 aa1.82□□□□□ -2.12
USP46-205ENST00000504078 A0A1B0GV90 55 aa1.82□□□□□ -2.12
USP46-205ENST00000504078 C8orf87E5RJ46 101 aa1.82□□□□□ -2.12
USP46-205ENST00000504078 E9PLD3 99 aa1.82□□□□□ -2.12
USP46-205ENST00000504078 TSPEAR-AS2P59090 65 aa1.82□□□□□ -2.12
USP46-205ENST00000504078 IFITM2Q01629 132 aa1.82□□□□□ -2.12
USP46-205ENST00000504078 FA2HQ7L5A8 372 aa1.82□□□□□ -2.12
USP46-205ENST00000504078 PCP2Q8IVA1 136 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms