RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 FAM229BQ4G0N7 80 aa12.18□□□□□ -0.46
PDGFRA-203ENST00000503856 TRAV23DV6A0A075B6W5 121 aa12.17□□□□□ -0.46
PDGFRA-203ENST00000503856 KRTAP13-2Q52LG2 175 aa12.17□□□□□ -0.46
PDGFRA-203ENST00000503856 TYMSOSQ8TAI1 123 aa12.17□□□□□ -0.46
PDGFRA-203ENST00000503856 SMCR5Q8TEV8 140 aa12.17□□□□□ -0.46
PDGFRA-203ENST00000503856 OR13C6PQ8NH95 151 aa12.16□□□□□ -0.46
PDGFRA-203ENST00000503856 SPRR4Q96PI1 79 aa12.15□□□□□ -0.46
PDGFRA-203ENST00000503856 HMCN2Q8NDA2 5059 aa12.14□□□□□ -0.47
PDGFRA-203ENST00000503856 IFITM1P13164 125 aa12.14□□□□□ -0.47
PDGFRA-203ENST00000503856 Q6ZVH6 145 aa12.14□□□□□ -0.47
PDGFRA-203ENST00000503856 ZNF73O43830 326 aaPredicted RBP12.13□□□□□ -0.47
PDGFRA-203ENST00000503856 Q6ZRX8 168 aa12.13□□□□□ -0.47
PDGFRA-203ENST00000503856 MUSTN1Q8IVN3 82 aa12.13□□□□□ -0.47
PDGFRA-203ENST00000503856 LINC00518Q8N0U6 118 aa12.13□□□□□ -0.47
PDGFRA-203ENST00000503856 COPS9Q8WXC6 57 aa12.12□□□□□ -0.47
PDGFRA-203ENST00000503856 Q9BRP9 147 aa12.12□□□□□ -0.47
PDGFRA-203ENST00000503856 ZNF706Q9Y5V0 76 aaPredicted RBP12.12□□□□□ -0.47
PDGFRA-203ENST00000503856 ERC2-IT1O76042 136 aa12.11□□□□□ -0.47
PDGFRA-203ENST00000503856 CBY1Q9Y3M2 126 aa12.11□□□□□ -0.47
PDGFRA-203ENST00000503856 PPDPFQ9H3Y8 114 aa12.1□□□□□ -0.47
PDGFRA-203ENST00000503856 C3orf22Q8N5N4 141 aa12.08□□□□□ -0.48
PDGFRA-203ENST00000503856 TSPAN13O95857 204 aa12.07□□□□□ -0.48
PDGFRA-203ENST00000503856 JOSD1Q15040 202 aaPredicted RBP12.07□□□□□ -0.48
PDGFRA-203ENST00000503856 HINT1P49773 126 aaPredicted RBP12.06□□□□□ -0.48
PDGFRA-203ENST00000503856 GAGE2AQ6NT46 116 aa12.04□□□□□ -0.48
PDGFRA-203ENST00000503856 LINC00483Q53H64 154 aa12.03□□□□□ -0.48
PDGFRA-203ENST00000503856 A6NDN8 102 aa12.02□□□□□ -0.49
PDGFRA-203ENST00000503856 COX8AP10176 69 aa12.02□□□□□ -0.49
PDGFRA-203ENST00000503856 C6orf99Q4VX62 202 aa12.02□□□□□ -0.49
PDGFRA-203ENST00000503856 LINC00304Q8N9R0 145 aa12.02□□□□□ -0.49
PDGFRA-203ENST00000503856 PAM16Q9Y3D7 125 aa11.99□□□□□ -0.49
PDGFRA-203ENST00000503856 COX7BP24311 80 aa11.98□□□□□ -0.49
PDGFRA-203ENST00000503856 ELOF1P60002 83 aaKnown RBP11.98□□□□□ -0.49
PDGFRA-203ENST00000503856 SPATA45Q537H7 98 aa11.98□□□□□ -0.49
PDGFRA-203ENST00000503856 ST20-AS1Q8NBB2 130 aa11.98□□□□□ -0.49
PDGFRA-203ENST00000503856 C14orf144Q96I85 54 aa11.98□□□□□ -0.49
PDGFRA-203ENST00000503856 TMA7Q9Y2S6 64 aaKnown RBP11.98□□□□□ -0.49
PDGFRA-203ENST00000503856 TRAV13-2A0A0B4J235 113 aa11.97□□□□□ -0.49
PDGFRA-203ENST00000503856 DLEU1O43261 78 aa11.97□□□□□ -0.49
PDGFRA-203ENST00000503856 A4D1N5 150 aa11.96□□□□□ -0.49
PDGFRA-203ENST00000503856 VAMP8Q9BV40 100 aa11.96□□□□□ -0.49
PDGFRA-203ENST00000503856 DHRS4-AS1Q9P1J3 65 aa11.96□□□□□ -0.49
PDGFRA-203ENST00000503856 PRR4Q16378 134 aa11.95□□□□□ -0.5
PDGFRA-203ENST00000503856 HIST1H4GQ99525 98 aa11.95□□□□□ -0.5
PDGFRA-203ENST00000503856 TRBV7-6A0A0J9YX20 115 aa11.94□□□□□ -0.5
PDGFRA-203ENST00000503856 IGLV9-49A0A0B4J1Y8 123 aa11.93□□□□□ -0.5
PDGFRA-203ENST00000503856 Q8NBF4 154 aa11.93□□□□□ -0.5
PDGFRA-203ENST00000503856 SMIM11BQ8TCY0 68 aa11.93□□□□□ -0.5
PDGFRA-203ENST00000503856 LRP2P98164 4655 aa11.92□□□□□ -0.5
PDGFRA-203ENST00000503856 A0A1B0GWB2 263 aa11.91□□□□□ -0.5
PDGFRA-203ENST00000503856 MOBPQ13875 183 aa11.91□□□□□ -0.5
PDGFRA-203ENST00000503856 PYY3Q5JQD4 70 aa11.9□□□□□ -0.5
PDGFRA-203ENST00000503856 SLC25A34Q6PIV7 304 aa11.9□□□□□ -0.5
PDGFRA-203ENST00000503856 CTAG1AP78358 180 aa11.89□□□□□ -0.51
PDGFRA-203ENST00000503856 SPAG11AQ6PDA7 123 aa11.89□□□□□ -0.51
PDGFRA-203ENST00000503856 C4orf48Q5BLP8 95 aa11.88□□□□□ -0.51
PDGFRA-203ENST00000503856 RETNLBQ9BQ08 111 aa11.88□□□□□ -0.51
PDGFRA-203ENST00000503856 HIGD1BQ9P298 99 aa11.88□□□□□ -0.51
PDGFRA-203ENST00000503856 SPRR1BP22528 89 aa11.87□□□□□ -0.51
PDGFRA-203ENST00000503856 SSBP3-AS1Q7Z2R9 100 aa11.87□□□□□ -0.51
PDGFRA-203ENST00000503856 C12orf57Q99622 126 aa11.87□□□□□ -0.51
PDGFRA-203ENST00000503856 C2orf91Q6ZV80 131 aa11.86□□□□□ -0.51
PDGFRA-203ENST00000503856 C9orf153Q5TBE3 101 aa11.84□□□□□ -0.51
PDGFRA-203ENST00000503856 LPAP08519 4548 aa11.83□□□□□ -0.51
PDGFRA-203ENST00000503856 TAL2Q16559 108 aa11.83□□□□□ -0.52
PDGFRA-203ENST00000503856 DEFB105AQ8NG35 78 aa11.83□□□□□ -0.52
PDGFRA-203ENST00000503856 UBR4Q5T4S7 5183 aa11.83□□□□□ -0.52
PDGFRA-203ENST00000503856 SPINK1P00995 79 aa11.81□□□□□ -0.52
PDGFRA-203ENST00000503856 VAMP3Q15836 100 aa11.81□□□□□ -0.52
PDGFRA-203ENST00000503856 LAMTOR3Q9UHA4 124 aa11.8□□□□□ -0.52
PDGFRA-203ENST00000503856 TEX49A0A1B0GTD5 131 aa11.79□□□□□ -0.52
PDGFRA-203ENST00000503856 CFC1BP0CG36 223 aa11.79□□□□□ -0.52
PDGFRA-203ENST00000503856 CFC1P0CG37 223 aa11.79□□□□□ -0.52
PDGFRA-203ENST00000503856 NHP2Q9NX24 153 aaKnown RBP11.79□□□□□ -0.52
PDGFRA-203ENST00000503856 LINC01547P58512 204 aaPredicted RBP11.78□□□□□ -0.52
PDGFRA-203ENST00000503856 Q1RN00 199 aa11.77□□□□□ -0.53
PDGFRA-203ENST00000503856 IGLV5-48A0A075B6I7 105 aa11.76□□□□□ -0.53
PDGFRA-203ENST00000503856 SLC25A20O43772 301 aa11.76□□□□□ -0.53
PDGFRA-203ENST00000503856 LINC00575Q6W349 94 aa11.76□□□□□ -0.53
PDGFRA-203ENST00000503856 CEND1Q8N111 149 aa11.76□□□□□ -0.53
PDGFRA-203ENST00000503856 H7C2G1 150 aa11.75□□□□□ -0.53
PDGFRA-203ENST00000503856 RAB37Q96AX2 223 aa11.75□□□□□ -0.53
PDGFRA-203ENST00000503856 SMIM29Q86T20 159 aa11.74□□□□□ -0.53
PDGFRA-203ENST00000503856 IGLV7-46A0A075B6I9 117 aa11.73□□□□□ -0.53
PDGFRA-203ENST00000503856 A0A0B4J2C4 111 aa11.73□□□□□ -0.53
PDGFRA-203ENST00000503856 hADV29S1A0JD25 119 aa11.72□□□□□ -0.53
PDGFRA-203ENST00000503856 RPS29P62273 56 aaKnown RBP11.72□□□□□ -0.53
PDGFRA-203ENST00000503856 Q8N377 158 aa11.72□□□□□ -0.53
PDGFRA-203ENST00000503856 FXYD2P54710 66 aa11.71□□□□□ -0.53
PDGFRA-203ENST00000503856 BVES-AS1Q5T3Y7 98 aa11.71□□□□□ -0.53
PDGFRA-203ENST00000503856 Q6ZQY7 126 aa11.69□□□□□ -0.54
PDGFRA-203ENST00000503856 TMEM238LA0A1B0GVL6 79 aa11.68□□□□□ -0.54
PDGFRA-203ENST00000503856 A6NJY4 79 aa11.68□□□□□ -0.54
PDGFRA-203ENST00000503856 HRCT1Q6UXD1 115 aa11.67□□□□□ -0.54
PDGFRA-203ENST00000503856 FP248Q71RG6 208 aaPredicted RBP11.67□□□□□ -0.54
PDGFRA-203ENST00000503856 HSD52Q0P140 79 aa11.66□□□□□ -0.54
PDGFRA-203ENST00000503856 PRO1933Q9H354 126 aa11.66□□□□□ -0.54
PDGFRA-203ENST00000503856 UQCR10Q9UDW1 63 aa11.66□□□□□ -0.54
PDGFRA-203ENST00000503856 PRO1854Q9UHT4 67 aa11.66□□□□□ -0.54
PDGFRA-203ENST00000503856 TPRXLQ17RH7 258 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms