RNA–Protein interactions for RNA: ENST00000503114.1

TRIM41-203, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 1,904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-203ENST00000503114 MRAPQ8TCY5 172 aa12.4□□□□□ -0.42
TRIM41-203ENST00000503114 CXCL6P80162 114 aa12.39□□□□□ -0.43
TRIM41-203ENST00000503114 SMIM20Q8N5G0 67 aa12.39□□□□□ -0.43
TRIM41-203ENST00000503114 IGLV5-37A0A075B6J1 123 aa12.37□□□□□ -0.43
TRIM41-203ENST00000503114 CYSTM1Q9H1C7 97 aa12.37□□□□□ -0.43
TRIM41-203ENST00000503114 HAMPP81172 84 aa12.37□□□□□ -0.43
TRIM41-203ENST00000503114 CASC10Q5T4H9 136 aa12.37□□□□□ -0.43
TRIM41-203ENST00000503114 DNAH1Q9P2D7 4330 aa12.36□□□□□ -0.43
TRIM41-203ENST00000503114 BCE1O60756 84 aa12.35□□□□□ -0.43
TRIM41-203ENST00000503114 RMI2Q96E14 147 aa12.35□□□□□ -0.43
TRIM41-203ENST00000503114 PRB2P02812 416 aaPredicted RBP12.33□□□□□ -0.44
TRIM41-203ENST00000503114 KRTAP4-16G5E9R7 235 aaPredicted RBP12.33□□□□□ -0.44
TRIM41-203ENST00000503114 K7EIL1 84 aa12.33□□□□□ -0.44
TRIM41-203ENST00000503114 PRYO14603 147 aa12.32□□□□□ -0.44
TRIM41-203ENST00000503114 HUWE1Q7Z6Z7 4374 aaKnown RBP12.31□□□□□ -0.44
TRIM41-203ENST00000503114 IGLV1-50A0A075B6I6 118 aa12.31□□□□□ -0.44
TRIM41-203ENST00000503114 SPRR1AP35321 89 aa12.31□□□□□ -0.44
TRIM41-203ENST00000503114 FAM168BA1KXE4 195 aa12.3□□□□□ -0.44
TRIM41-203ENST00000503114 Q6ZRX8 168 aa12.3□□□□□ -0.44
TRIM41-203ENST00000503114 KRTAP7-1Q8IUC3 87 aa12.3□□□□□ -0.44
TRIM41-203ENST00000503114 Q8N377 158 aa12.3□□□□□ -0.44
TRIM41-203ENST00000503114 DHRS4-AS1Q9P1J3 65 aa12.3□□□□□ -0.44
TRIM41-203ENST00000503114 TMEM258P61165 79 aa12.28□□□□□ -0.44
TRIM41-203ENST00000503114 IGLV5-48A0A075B6I7 105 aa12.27□□□□□ -0.45
TRIM41-203ENST00000503114 RPL37AP8A6NKH3 93 aa12.27□□□□□ -0.45
TRIM41-203ENST00000503114 Q9BRP9 147 aa12.27□□□□□ -0.45
TRIM41-203ENST00000503114 NOTCH1P46531 2555 aa12.26□□□□□ -0.45
TRIM41-203ENST00000503114 TRAV7A0A075B6U4 112 aa12.25□□□□□ -0.45
TRIM41-203ENST00000503114 LOC107984640A0A0U1RRK4 108 aa12.25□□□□□ -0.45
TRIM41-203ENST00000503114 DEFB105AQ8NG35 78 aa12.24□□□□□ -0.45
TRIM41-203ENST00000503114 ETDCA0A1B0GVM5 59 aa12.23□□□□□ -0.45
TRIM41-203ENST00000503114 SCXQ7RTU7 201 aa12.23□□□□□ -0.45
TRIM41-203ENST00000503114 MRPL55Q7Z7F7 128 aaKnown RBP12.23□□□□□ -0.45
TRIM41-203ENST00000503114 TNP2Q05952 138 aa12.2□□□□□ -0.46
TRIM41-203ENST00000503114 FAM19A5Q7Z5A7 132 aaPredicted RBP12.2□□□□□ -0.46
TRIM41-203ENST00000503114 J3KT08 172 aa12.19□□□□□ -0.46
TRIM41-203ENST00000503114 RPS28P62857 69 aaKnown RBP12.19□□□□□ -0.46
TRIM41-203ENST00000503114 NREPQ16612 68 aa12.18□□□□□ -0.46
TRIM41-203ENST00000503114 C20orf197Q8N268 126 aa12.18□□□□□ -0.46
TRIM41-203ENST00000503114 A0A1B0GW54 56 aa12.17□□□□□ -0.46
TRIM41-203ENST00000503114 ST20-AS1Q8NBB2 130 aa12.16□□□□□ -0.46
TRIM41-203ENST00000503114 C3orf84H3BNL1 204 aa12.15□□□□□ -0.46
TRIM41-203ENST00000503114 IGKV4-1P06312 121 aa12.15□□□□□ -0.46
TRIM41-203ENST00000503114 KRTAP1-5Q9BYS1 174 aa12.15□□□□□ -0.46
TRIM41-203ENST00000503114 DPH3Q96FX2 82 aa12.15□□□□□ -0.46
TRIM41-203ENST00000503114 NBEAL1Q6ZS30 2694 aa12.14□□□□□ -0.47
TRIM41-203ENST00000503114 ERC2-IT1O76042 136 aa12.14□□□□□ -0.47
TRIM41-203ENST00000503114 REG3GQ6UW15 175 aa12.14□□□□□ -0.47
TRIM41-203ENST00000503114 A0A1W2PNM2 257 aa12.13□□□□□ -0.47
TRIM41-203ENST00000503114 COL6A5A8TX70 2615 aa12.13□□□□□ -0.47
TRIM41-203ENST00000503114 FUSP35637 526 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRIM41-203ENST00000503114 CNBPP62633 177 aaKnown RBP12.13□□□□□ -0.47
TRIM41-203ENST00000503114 KLKP1Q107X0 134 aa12.13□□□□□ -0.47
TRIM41-203ENST00000503114 C1orf137Q5JT78 98 aa12.12□□□□□ -0.47
TRIM41-203ENST00000503114 SVIPQ8NHG7 77 aa12.12□□□□□ -0.47
TRIM41-203ENST00000503114 C16orf90A8MZG2 172 aa12.11□□□□□ -0.47
TRIM41-203ENST00000503114 BPY2O14599 106 aa12.11□□□□□ -0.47
TRIM41-203ENST00000503114 UBE2BP63146 152 aa12.11□□□□□ -0.47
TRIM41-203ENST00000503114 Q8N9L7 120 aa12.1□□□□□ -0.47
TRIM41-203ENST00000503114 Q8NBF4 154 aa12.1□□□□□ -0.47
TRIM41-203ENST00000503114 A0A096LNI7 61 aa12.09□□□□□ -0.47
TRIM41-203ENST00000503114 SPRR4Q96PI1 79 aa12.09□□□□□ -0.47
TRIM41-203ENST00000503114 H7BZZ5 65 aa12.08□□□□□ -0.48
TRIM41-203ENST00000503114 APLNQ9ULZ1 77 aa12.07□□□□□ -0.48
TRIM41-203ENST00000503114 SMIM29Q86T20 159 aa12.06□□□□□ -0.48
TRIM41-203ENST00000503114 A0A1W2PNN7 141 aa12.05□□□□□ -0.48
TRIM41-203ENST00000503114 PSCAO43653 123 aa12.03□□□□□ -0.48
TRIM41-203ENST00000503114 IGKV2-24A0A0C4DH68 120 aa12.03□□□□□ -0.48
TRIM41-203ENST00000503114 UBE2DNLQ8IWF7 75 aa12.03□□□□□ -0.48
TRIM41-203ENST00000503114 DNAH10Q8IVF4 4471 aa12.02□□□□□ -0.48
TRIM41-203ENST00000503114 FAM236DA0A1B0GTK5 79 aa12.02□□□□□ -0.49
TRIM41-203ENST00000503114 OXTP01178 125 aa12.02□□□□□ -0.49
TRIM41-203ENST00000503114 FAM236CP0DP71 79 aa12.02□□□□□ -0.49
TRIM41-203ENST00000503114 C14orf177Q52M58 125 aa12.01□□□□□ -0.49
TRIM41-203ENST00000503114 SNURFQ9Y675 71 aa12.01□□□□□ -0.49
TRIM41-203ENST00000503114 DNAH9Q9NYC9 4486 aa12.01□□□□□ -0.49
TRIM41-203ENST00000503114 OCR1Q9BZK8 76 aa12.01□□□□□ -0.49
TRIM41-203ENST00000503114 DYNC2H1Q8NCM8 4307 aaKnown RBP12□□□□□ -0.49
TRIM41-203ENST00000503114 LINC00476Q8WZB0 136 aa11.99□□□□□ -0.49
TRIM41-203ENST00000503114 MDFIQ99750 246 aa11.98□□□□□ -0.49
TRIM41-203ENST00000503114 B9D2Q9BPU9 175 aa11.98□□□□□ -0.49
TRIM41-203ENST00000503114 PRLHP81277 87 aa11.98□□□□□ -0.49
TRIM41-203ENST00000503114 LYSTQ99698 3801 aa11.98□□□□□ -0.49
TRIM41-203ENST00000503114 F8WEM9 126 aa11.97□□□□□ -0.49
TRIM41-203ENST00000503114 NDUFC1O43677 76 aa11.97□□□□□ -0.49
TRIM41-203ENST00000503114 MGAM2Q2M2H8 2515 aa11.97□□□□□ -0.49
TRIM41-203ENST00000503114 IGLV8-61A0A075B6I0 122 aa11.96□□□□□ -0.49
TRIM41-203ENST00000503114 COL7A1Q02388 2944 aa11.96□□□□□ -0.5
TRIM41-203ENST00000503114 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.96□□□□□ -0.5
TRIM41-203ENST00000503114 TMEM254Q8TBM7 123 aa11.96□□□□□ -0.5
TRIM41-203ENST00000503114 STAB2Q8WWQ8 2551 aa11.95□□□□□ -0.5
TRIM41-203ENST00000503114 DSCR10P59022 87 aa11.94□□□□□ -0.5
TRIM41-203ENST00000503114 IGFL1Q6UW32 110 aa11.94□□□□□ -0.5
TRIM41-203ENST00000503114 EPM2AB3EWF7 344 aa11.92□□□□□ -0.5
TRIM41-203ENST00000503114 LRCOL1A6NCL2 159 aa11.92□□□□□ -0.5
TRIM41-203ENST00000503114 CHTF8P0CG12 524 aa11.92□□□□□ -0.5
TRIM41-203ENST00000503114 KRTAP11-1Q8IUC1 163 aa11.92□□□□□ -0.5
TRIM41-203ENST00000503114 HIGD2AQ9BW72 106 aa11.92□□□□□ -0.5
TRIM41-203ENST00000503114 H0Y9J4 135 aa11.91□□□□□ -0.5
TRIM41-203ENST00000503114 PHF5AQ7RTV0 110 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms