RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 CMYA5Q8N3K9 4069 aa12.2□□□□□ -0.46
SCARB2-203ENST00000502908 TRBV7-6A0A0J9YX20 115 aa12.2□□□□□ -0.46
SCARB2-203ENST00000502908 H3BQ85 93 aa12.2□□□□□ -0.46
SCARB2-203ENST00000502908 STAB1Q9NY15 2570 aa12.18□□□□□ -0.46
SCARB2-203ENST00000502908 RPL37AP8A6NKH3 93 aa12.17□□□□□ -0.46
SCARB2-203ENST00000502908 BPY2O14599 106 aa12.17□□□□□ -0.46
SCARB2-203ENST00000502908 SYCNQ0VAF6 134 aa12.17□□□□□ -0.46
SCARB2-203ENST00000502908 Q5XG85 94 aa12.17□□□□□ -0.46
SCARB2-203ENST00000502908 F8WEM9 126 aa12.16□□□□□ -0.46
SCARB2-203ENST00000502908 NKAPP1Q8N9T2 125 aa12.16□□□□□ -0.46
SCARB2-203ENST00000502908 FAM168BA1KXE4 195 aa12.15□□□□□ -0.46
SCARB2-203ENST00000502908 HRCT1Q6UXD1 115 aa12.15□□□□□ -0.46
SCARB2-203ENST00000502908 C7orf33Q8WU49 177 aa12.15□□□□□ -0.46
SCARB2-203ENST00000502908 BAHCC1Q9P281 2608 aa12.15□□□□□ -0.47
SCARB2-203ENST00000502908 NOTCH1P46531 2555 aa12.14□□□□□ -0.47
SCARB2-203ENST00000502908 KLKP1Q107X0 134 aa12.14□□□□□ -0.47
SCARB2-203ENST00000502908 FBN1P35555 2871 aaKnown RBP12.14□□□□□ -0.47
SCARB2-203ENST00000502908 MAST4O15021 2626 aa12.14□□□□□ -0.47
SCARB2-203ENST00000502908 DEFB131BA0A096LNP1 70 aa12.14□□□□□ -0.47
SCARB2-203ENST00000502908 H3BNG1 76 aa12.13□□□□□ -0.47
SCARB2-203ENST00000502908 C5orf47Q569G3 176 aa12.13□□□□□ -0.47
SCARB2-203ENST00000502908 WIPF1O43516 503 aa12.13□□□□□ -0.47
SCARB2-203ENST00000502908 NREPQ16612 68 aa12.12□□□□□ -0.47
SCARB2-203ENST00000502908 Q8N377 158 aa12.12□□□□□ -0.47
SCARB2-203ENST00000502908 BCE1O60756 84 aa12.12□□□□□ -0.47
SCARB2-203ENST00000502908 CASC10Q5T4H9 136 aa12.12□□□□□ -0.47
SCARB2-203ENST00000502908 F8P00451 2351 aa12.11□□□□□ -0.47
SCARB2-203ENST00000502908 LINC01556Q5JQF7 62 aa12.11□□□□□ -0.47
SCARB2-203ENST00000502908 IGKV4-1P06312 121 aa12.1□□□□□ -0.47
SCARB2-203ENST00000502908 KCNQ1DNQ9H478 68 aa12.09□□□□□ -0.47
SCARB2-203ENST00000502908 C11orf45Q8TAV5 145 aa12.08□□□□□ -0.48
SCARB2-203ENST00000502908 ST20-AS1Q8NBB2 130 aa12.08□□□□□ -0.48
SCARB2-203ENST00000502908 Q9BRP9 147 aa12.07□□□□□ -0.48
SCARB2-203ENST00000502908 TMEM254Q8TBM7 123 aa12.04□□□□□ -0.48
SCARB2-203ENST00000502908 SERP1Q9Y6X1 66 aa12.04□□□□□ -0.48
SCARB2-203ENST00000502908 Q6ZRX8 168 aa12.02□□□□□ -0.48
SCARB2-203ENST00000502908 PRB2P02812 416 aaPredicted RBP12.02□□□□□ -0.49
SCARB2-203ENST00000502908 KRTAP7-1Q8IUC3 87 aa12.02□□□□□ -0.49
SCARB2-203ENST00000502908 LYSTQ99698 3801 aa12.02□□□□□ -0.49
SCARB2-203ENST00000502908 A0A1W2PNM2 257 aa12.01□□□□□ -0.49
SCARB2-203ENST00000502908 ERC2-IT1O76042 136 aa12□□□□□ -0.49
SCARB2-203ENST00000502908 ETDCA0A1B0GVM5 59 aa12□□□□□ -0.49
SCARB2-203ENST00000502908 IGLV5-48A0A075B6I7 105 aa11.99□□□□□ -0.49
SCARB2-203ENST00000502908 DNAH1Q9P2D7 4330 aa11.99□□□□□ -0.49
SCARB2-203ENST00000502908 A0A0G2JQZ4 141 aa11.99□□□□□ -0.49
SCARB2-203ENST00000502908 A0A1W2PNN7 141 aa11.99□□□□□ -0.49
SCARB2-203ENST00000502908 DNAH10OSP0CZ25 163 aa11.99□□□□□ -0.49
SCARB2-203ENST00000502908 IGLV1-50A0A075B6I6 118 aa11.98□□□□□ -0.49
SCARB2-203ENST00000502908 OCR1Q9BZK8 76 aa11.98□□□□□ -0.49
SCARB2-203ENST00000502908 LINC00588Q9Y4M8 146 aa11.98□□□□□ -0.49
SCARB2-203ENST00000502908 EPM2AB3EWF7 344 aa11.98□□□□□ -0.49
SCARB2-203ENST00000502908 KRTAP4-16G5E9R7 235 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-203ENST00000502908 DNAH10Q8IVF4 4471 aa11.98□□□□□ -0.49
SCARB2-203ENST00000502908 C1orf137Q5JT78 98 aa11.97□□□□□ -0.49
SCARB2-203ENST00000502908 FUSP35637 526 aaKnown RBP eCLIP11.97□□□□□ -0.49
SCARB2-203ENST00000502908 FAM30AQ9NZY2 134 aa11.97□□□□□ -0.49
SCARB2-203ENST00000502908 SMIM29Q86T20 159 aa11.96□□□□□ -0.49
SCARB2-203ENST00000502908 HIGD2AQ9BW72 106 aa11.96□□□□□ -0.49
SCARB2-203ENST00000502908 LINC00474Q9P2X8 69 aa11.96□□□□□ -0.49
SCARB2-203ENST00000502908 COL6A5A8TX70 2615 aa11.96□□□□□ -0.49
SCARB2-203ENST00000502908 DNAH3Q8TD57 4116 aa11.96□□□□□ -0.5
SCARB2-203ENST00000502908 MRAPQ8TCY5 172 aa11.95□□□□□ -0.5
SCARB2-203ENST00000502908 DHRS4-AS1Q9P1J3 65 aa11.95□□□□□ -0.5
SCARB2-203ENST00000502908 CSMD3Q7Z407 3707 aa11.95□□□□□ -0.5
SCARB2-203ENST00000502908 NBEAL1Q6ZS30 2694 aa11.95□□□□□ -0.5
SCARB2-203ENST00000502908 FP248Q71RG6 208 aaPredicted RBP11.95□□□□□ -0.5
SCARB2-203ENST00000502908 UBE2BP63146 152 aa11.94□□□□□ -0.5
SCARB2-203ENST00000502908 F8WDY8 70 aa11.93□□□□□ -0.5
SCARB2-203ENST00000502908 TLX1NBP0CAT3 122 aa11.93□□□□□ -0.5
SCARB2-203ENST00000502908 NDUFC1O43677 76 aa11.92□□□□□ -0.5
SCARB2-203ENST00000502908 TNP2Q05952 138 aa11.92□□□□□ -0.5
SCARB2-203ENST00000502908 KRTAP24-1Q3LI83 254 aa11.92□□□□□ -0.5
SCARB2-203ENST00000502908 PRYO14603 147 aa11.91□□□□□ -0.5
SCARB2-203ENST00000502908 MRPL55Q7Z7F7 128 aaKnown RBP11.91□□□□□ -0.5
SCARB2-203ENST00000502908 SPRR1AP35321 89 aa11.91□□□□□ -0.5
SCARB2-203ENST00000502908 A0A0U1RQV1 116 aa11.9□□□□□ -0.5
SCARB2-203ENST00000502908 FAM229BQ4G0N7 80 aa11.89□□□□□ -0.51
SCARB2-203ENST00000502908 SRRM2Q9UQ35 2752 aaKnown RBP11.89□□□□□ -0.51
SCARB2-203ENST00000502908 Q8NBF4 154 aa11.89□□□□□ -0.51
SCARB2-203ENST00000502908 PLA2G2DQ9UNK4 145 aa11.89□□□□□ -0.51
SCARB2-203ENST00000502908 DEFB116Q30KQ4 102 aa11.87□□□□□ -0.51
SCARB2-203ENST00000502908 K7EQZ3 153 aa11.87□□□□□ -0.51
SCARB2-203ENST00000502908 HUWE1Q7Z6Z7 4374 aaKnown RBP11.86□□□□□ -0.51
SCARB2-203ENST00000502908 IGLV5-37A0A075B6J1 123 aa11.85□□□□□ -0.51
SCARB2-203ENST00000502908 SMIM26A0A096LP01 95 aa11.85□□□□□ -0.51
SCARB2-203ENST00000502908 IGKV2-24A0A0C4DH68 120 aa11.85□□□□□ -0.51
SCARB2-203ENST00000502908 DSCR10P59022 87 aa11.85□□□□□ -0.51
SCARB2-203ENST00000502908 LINC00336Q6ZUF6 198 aa11.85□□□□□ -0.51
SCARB2-203ENST00000502908 PRLHP81277 87 aa11.84□□□□□ -0.51
SCARB2-203ENST00000502908 REG3GQ6UW15 175 aa11.83□□□□□ -0.52
SCARB2-203ENST00000502908 LINC00476Q8WZB0 136 aa11.82□□□□□ -0.52
SCARB2-203ENST00000502908 DNAH9Q9NYC9 4486 aa11.82□□□□□ -0.52
SCARB2-203ENST00000502908 MPLKIPQ8TAP9 179 aa11.82□□□□□ -0.52
SCARB2-203ENST00000502908 SPRR4Q96PI1 79 aa11.81□□□□□ -0.52
SCARB2-203ENST00000502908 ATP5EP56381 51 aaPredicted RBP11.79□□□□□ -0.52
SCARB2-203ENST00000502908 A0A096LNI7 61 aa11.78□□□□□ -0.52
SCARB2-203ENST00000502908 IGFL1Q6UW32 110 aa11.76□□□□□ -0.53
SCARB2-203ENST00000502908 KRTAP1-5Q9BYS1 174 aa11.76□□□□□ -0.53
SCARB2-203ENST00000502908 TENM2Q9NT68 2774 aa11.75□□□□□ -0.53
SCARB2-203ENST00000502908 LRCOL1A6NCL2 159 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms