RNA–Protein interactions for RNA: ENST00000498226.5

SOX2-OT-217, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 560 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-217ENST00000498226 LINC01600Q96MT4 127 aa1.98□□□□□ -2.09
SOX2-OT-217ENST00000498226 SMIM7Q9BQ49 75 aa1.98□□□□□ -2.09
SOX2-OT-217ENST00000498226 ST20Q9HBF5 79 aa1.98□□□□□ -2.09
SOX2-OT-217ENST00000498226 BIN3Q9NQY0 253 aa1.98□□□□□ -2.09
SOX2-OT-217ENST00000498226 CDC42SE2Q9NRR3 84 aa1.98□□□□□ -2.09
SOX2-OT-217ENST00000498226 TRBV6-5A0A0K0K1A5 114 aa1.97□□□□□ -2.09
SOX2-OT-217ENST00000498226 A0A1B0GUT8 65 aa1.97□□□□□ -2.09
SOX2-OT-217ENST00000498226 A0A1B0GVG6 124 aa1.97□□□□□ -2.09
SOX2-OT-217ENST00000498226 C7orf77A4D0Y5 90 aa1.97□□□□□ -2.09
SOX2-OT-217ENST00000498226 APOMO95445 188 aa1.97□□□□□ -2.09
SOX2-OT-217ENST00000498226 SRP19P09132 144 aaKnown RBP1.97□□□□□ -2.09
SOX2-OT-217ENST00000498226 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
SOX2-OT-217ENST00000498226 SS18Q15532 418 aa1.97□□□□□ -2.09
SOX2-OT-217ENST00000498226 C9orf116Q5BN46 136 aaPredicted RBP1.97□□□□□ -2.09
SOX2-OT-217ENST00000498226 EIF5AL1Q6IS14 154 aaKnown RBP1.97□□□□□ -2.09
SOX2-OT-217ENST00000498226 NUP35Q8NFH5 326 aa1.97□□□□□ -2.09
SOX2-OT-217ENST00000498226 TSKUQ8WUA8 353 aa1.97□□□□□ -2.09
SOX2-OT-217ENST00000498226 BTF3L4Q96K17 158 aa1.97□□□□□ -2.09
SOX2-OT-217ENST00000498226 PSORS1C2Q9UIG4 136 aa1.97□□□□□ -2.09
SOX2-OT-217ENST00000498226 V9GYV3 84 aa1.97□□□□□ -2.09
SOX2-OT-217ENST00000498226 TRBV27A0A0K0K1C4 114 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 LOC107984640A0A0U1RRK4 108 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 ZNF727A8MUV8 499 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 COX7A2LO14548 114 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 MT-ND6P03923 174 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 S100A6P06703 90 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 ZNF25P17030 456 aaPredicted RBP1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 FCER1GP30273 86 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 SPAG11BQ08648 103 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 ADIRFQ15847 76 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 C1orf137Q5JT78 98 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 MRPL54Q6P161 138 aaKnown RBP1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 TEX261Q6UWH6 196 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 SPINK6Q6UWN8 80 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 UNQ6190/PRO20217Q6UXQ8 127 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 AKAP14Q86UN6 197 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 TMEM191AQ9H0A3 160 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 UBE2D4Q9Y2X8 147 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 FAT4Q6V0I7 4981 aa1.96□□□□□ -2.1
SOX2-OT-217ENST00000498226 C1orf196B1AJZ1 125 aa1.95□□□□□ -2.1
SOX2-OT-217ENST00000498226 D6R8Y8 96 aa1.95□□□□□ -2.1
SOX2-OT-217ENST00000498226 NPYP01303 97 aa1.95□□□□□ -2.1
SOX2-OT-217ENST00000498226 C2orf82Q6UX34 121 aa1.95□□□□□ -2.1
SOX2-OT-217ENST00000498226 BORCS7Q96B45 105 aa1.95□□□□□ -2.1
SOX2-OT-217ENST00000498226 OSTCQ9NRP0 149 aa1.95□□□□□ -2.1
SOX2-OT-217ENST00000498226 LINC00474Q9P2X8 69 aa1.95□□□□□ -2.1
SOX2-OT-217ENST00000498226 C6orf48Q9UBA6 75 aa1.95□□□□□ -2.1
SOX2-OT-217ENST00000498226 MUC17Q685J3 4493 aa1.95□□□□□ -2.1
SOX2-OT-217ENST00000498226 TGIF2-C20orf24A0A0A6YYL0 155 aa1.94□□□□□ -2.1
SOX2-OT-217ENST00000498226 SMIM27A0A1W2PRY6 76 aa1.94□□□□□ -2.1
SOX2-OT-217ENST00000498226 CKS2P33552 79 aa1.94□□□□□ -2.1
SOX2-OT-217ENST00000498226 KRTAP12-3P60328 96 aa1.94□□□□□ -2.1
SOX2-OT-217ENST00000498226 RAB5BP61020 215 aa1.94□□□□□ -2.1
SOX2-OT-217ENST00000498226 BATFQ16520 125 aa1.94□□□□□ -2.1
SOX2-OT-217ENST00000498226 SMIM2Q9BVW6 85 aa1.94□□□□□ -2.1
SOX2-OT-217ENST00000498226 NAT8BQ9UHF3 227 aa1.94□□□□□ -2.1
SOX2-OT-217ENST00000498226 C11orf86A6NJI1 115 aa1.93□□□□□ -2.1
SOX2-OT-217ENST00000498226 H3BPC8 53 aa1.93□□□□□ -2.1
SOX2-OT-217ENST00000498226 LST1O00453 97 aa1.93□□□□□ -2.1
SOX2-OT-217ENST00000498226 NDUFA1O15239 70 aa1.93□□□□□ -2.1
SOX2-OT-217ENST00000498226 HBBP68871 147 aa1.93□□□□□ -2.1
SOX2-OT-217ENST00000498226 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
SOX2-OT-217ENST00000498226 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
SOX2-OT-217ENST00000498226 PRELID3AQ96N28 172 aa1.93□□□□□ -2.1
SOX2-OT-217ENST00000498226 C20orf78Q9BR46 151 aa1.93□□□□□ -2.1
SOX2-OT-217ENST00000498226 TIMM21Q9BVV7 248 aa1.93□□□□□ -2.1
SOX2-OT-217ENST00000498226 TTTY13Q9BZ97 58 aa1.93□□□□□ -2.1
SOX2-OT-217ENST00000498226 NAT8Q9UHE5 227 aa1.93□□□□□ -2.1
SOX2-OT-217ENST00000498226 UBE2BP63146 152 aa1.92□□□□□ -2.1
SOX2-OT-217ENST00000498226 MRPS36P82909 103 aaKnown RBP1.92□□□□□ -2.1
SOX2-OT-217ENST00000498226 IFITM2Q01629 132 aa1.92□□□□□ -2.1
SOX2-OT-217ENST00000498226 DIRC1Q969H9 104 aa1.92□□□□□ -2.1
SOX2-OT-217ENST00000498226 MIEN1Q9BRT3 115 aa1.92□□□□□ -2.1
SOX2-OT-217ENST00000498226 XAGE1AQ9HD64 81 aa1.92□□□□□ -2.1
SOX2-OT-217ENST00000498226 SPANXA1Q9NS26 97 aa1.92□□□□□ -2.1
SOX2-OT-217ENST00000498226 MRPL35Q9NZE8 188 aaKnown RBP1.92□□□□□ -2.1
SOX2-OT-217ENST00000498226 TOMM7Q9P0U1 55 aa1.92□□□□□ -2.1
SOX2-OT-217ENST00000498226 PKIGQ9Y2B9 76 aa1.92□□□□□ -2.1
SOX2-OT-217ENST00000498226 A8MUN3 132 aa1.91□□□□□ -2.1
SOX2-OT-217ENST00000498226 F8W036 122 aa1.91□□□□□ -2.1
SOX2-OT-217ENST00000498226 PPP1R17O96001 155 aa1.91□□□□□ -2.1
SOX2-OT-217ENST00000498226 UBE2D1P51668 147 aa1.91□□□□□ -2.1
SOX2-OT-217ENST00000498226 PEA15Q15121 130 aa1.91□□□□□ -2.1
SOX2-OT-217ENST00000498226 SMCR5Q8TEV8 140 aa1.91□□□□□ -2.1
SOX2-OT-217ENST00000498226 ZCCHC13Q8WW36 166 aaKnown RBP1.91□□□□□ -2.1
SOX2-OT-217ENST00000498226 TMEM141Q96I45 108 aa1.91□□□□□ -2.1
SOX2-OT-217ENST00000498226 IMMP2LQ96T52 175 aa1.91□□□□□ -2.1
SOX2-OT-217ENST00000498226 C22orf24Q9Y442 160 aa1.91□□□□□ -2.1
SOX2-OT-217ENST00000498226 TRBV30A0A0K0K1B3 111 aa1.9□□□□□ -2.11
SOX2-OT-217ENST00000498226 ADCYAP1P18509 176 aa1.9□□□□□ -2.11
SOX2-OT-217ENST00000498226 IFI27P40305 119 aaPredicted RBP1.9□□□□□ -2.11
SOX2-OT-217ENST00000498226 FABP9Q0Z7S8 132 aa1.9□□□□□ -2.11
SOX2-OT-217ENST00000498226 Q8N8P6 123 aa1.9□□□□□ -2.11
SOX2-OT-217ENST00000498226 AMELXQ99217 191 aa1.9□□□□□ -2.11
SOX2-OT-217ENST00000498226 RETNLBQ9BQ08 111 aa1.9□□□□□ -2.11
SOX2-OT-217ENST00000498226 CDKN2A-AS1Q9UH64 79 aa1.9□□□□□ -2.11
SOX2-OT-217ENST00000498226 IGIPA6NJ69 53 aa1.89□□□□□ -2.11
SOX2-OT-217ENST00000498226 PPBPP02775 128 aa1.89□□□□□ -2.11
SOX2-OT-217ENST00000498226 S100A8P05109 93 aa1.89□□□□□ -2.11
SOX2-OT-217ENST00000498226 SPINK8P0C7L1 97 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms